RNA–Protein interactions for RNA: ENST00000333843.8

MBD3L3-201, Transcript of methyl-CpG binding domain protein 3 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3L3, Length 775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3-201ENST00000333843 CERS3Q8IU89 383 aa16.72■□□□□ 0.27
MBD3L3-201ENST00000333843 CLASRPQ8N2M8 674 aaKnown RBP16.72■□□□□ 0.27
MBD3L3-201ENST00000333843 ABHD8Q96I13 439 aa16.72■□□□□ 0.27
MBD3L3-201ENST00000333843 MS4A4AQ96JQ5 239 aa16.72■□□□□ 0.27
MBD3L3-201ENST00000333843 NOL10Q9BSC4 688 aaKnown RBP16.72■□□□□ 0.27
MBD3L3-201ENST00000333843 ZCCHC17Q9NP64 241 aaKnown RBP16.72■□□□□ 0.27
MBD3L3-201ENST00000333843 IGF2BP3O00425 579 aaKnown RBP eCLIP16.71■□□□□ 0.27
MBD3L3-201ENST00000333843 PPATQ06203 517 aa16.71■□□□□ 0.27
MBD3L3-201ENST00000333843 C20orf194Q5TEA3 1177 aa16.71■□□□□ 0.27
MBD3L3-201ENST00000333843 NAA16Q6N069 864 aaPredicted RBP16.71■□□□□ 0.27
MBD3L3-201ENST00000333843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.71■□□□□ 0.27
MBD3L3-201ENST00000333843 CCDC8Q9H0W5 538 aaPredicted RBP16.71■□□□□ 0.27
MBD3L3-201ENST00000333843 DOCK1Q14185 1865 aa16.71■□□□□ 0.27
MBD3L3-201ENST00000333843 GPR25O00155 361 aa16.7■□□□□ 0.26
MBD3L3-201ENST00000333843 BAG3O95817 575 aa16.7■□□□□ 0.26
MBD3L3-201ENST00000333843 ZAP70P43403 619 aa16.7■□□□□ 0.26
MBD3L3-201ENST00000333843 PPP4CP60510 307 aa16.7■□□□□ 0.26
MBD3L3-201ENST00000333843 CTU1Q7Z7A3 348 aaKnown RBP16.7■□□□□ 0.26
MBD3L3-201ENST00000333843 OTUD5Q96G74 571 aa16.7■□□□□ 0.26
MBD3L3-201ENST00000333843 MCOLN1Q9GZU1 580 aa16.7■□□□□ 0.26
MBD3L3-201ENST00000333843 DDX4Q9NQI0 724 aaKnown RBP16.7■□□□□ 0.26
MBD3L3-201ENST00000333843 SNRKQ9NRH2 765 aa16.7■□□□□ 0.26
MBD3L3-201ENST00000333843 CDK5RAP2Q96SN8 1893 aa16.69■□□□□ 0.26
MBD3L3-201ENST00000333843 MYO5AQ9Y4I1 1855 aaKnown RBP16.69■□□□□ 0.26
MBD3L3-201ENST00000333843 TBC1D12O60347 775 aa16.69■□□□□ 0.26
MBD3L3-201ENST00000333843 TBC1D8O95759 1140 aa16.69■□□□□ 0.26
MBD3L3-201ENST00000333843 CETPP11597 493 aa16.69■□□□□ 0.26
MBD3L3-201ENST00000333843 DGKZQ13574 1117 aa16.69■□□□□ 0.26
MBD3L3-201ENST00000333843 MIGA2Q7L4E1 593 aa16.69■□□□□ 0.26
MBD3L3-201ENST00000333843 ZNF296Q8WUU4 475 aaPredicted RBP16.69■□□□□ 0.26
MBD3L3-201ENST00000333843 ZKSCAN4Q969J2 545 aaPredicted RBP16.69■□□□□ 0.26
MBD3L3-201ENST00000333843 CCL15-CCL14A0A0B4J2E2 113 aa16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 INPP5BP32019 993 aa16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 SNAPC2Q13487 334 aa16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 PICALMQ13492 652 aa16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 PKN2Q16513 984 aaKnown RBP16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 CCL15Q16663 113 aa16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 SH3BP5LQ7L8J4 393 aa16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 ZFPM1Q8IX07 1006 aa16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 CNKSR2Q8WXI2 1034 aa16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 BRI3BPQ8WY22 251 aa16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 OSBPL5Q9H0X9 879 aaPredicted RBP16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 IL1RAPL2Q9NP60 686 aa16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 KCNH4Q9UQ05 1017 aa16.68■□□□□ 0.26
MBD3L3-201ENST00000333843 DDTLA6NHG4 134 aaPredicted RBP16.67■□□□□ 0.26
MBD3L3-201ENST00000333843 PHF20L1A8MW92 1017 aa16.67■□□□□ 0.26
MBD3L3-201ENST00000333843 FKTNO75072 461 aa16.67■□□□□ 0.26
MBD3L3-201ENST00000333843 TEX11Q8IYF3 940 aa16.67■□□□□ 0.26
MBD3L3-201ENST00000333843 SCYL3Q8IZE3 742 aa16.67■□□□□ 0.26
MBD3L3-201ENST00000333843 PTPN18Q99952 460 aa16.67■□□□□ 0.26
MBD3L3-201ENST00000333843 DHX36Q9H2U1 1008 aaKnown RBP16.67■□□□□ 0.26
MBD3L3-201ENST00000333843 IRF6O14896 467 aa16.66■□□□□ 0.26
MBD3L3-201ENST00000333843 IFIT2P09913 472 aaKnown RBP16.66■□□□□ 0.26
MBD3L3-201ENST00000333843 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
MBD3L3-201ENST00000333843 MAP3K12Q12852 859 aa16.66■□□□□ 0.26
MBD3L3-201ENST00000333843 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.66■□□□□ 0.26
MBD3L3-201ENST00000333843 HERC5Q9UII4 1024 aaKnown RBP16.66■□□□□ 0.26
MBD3L3-201ENST00000333843 SIPA1L1O43166 1804 aa16.66■□□□□ 0.26
MBD3L3-201ENST00000333843 DDX60LQ5H9U9 1706 aaKnown RBP16.65■□□□□ 0.26
MBD3L3-201ENST00000333843 CTNND1O60716 968 aaKnown RBP16.65■□□□□ 0.26
MBD3L3-201ENST00000333843 CRHR2Q13324 411 aa16.65■□□□□ 0.26
MBD3L3-201ENST00000333843 ADGRA1Q86SQ6 560 aa16.65■□□□□ 0.26
MBD3L3-201ENST00000333843 SH3RF3Q8TEJ3 882 aaPredicted RBP16.65■□□□□ 0.26
MBD3L3-201ENST00000333843 LRRCC1Q9C099 1032 aa16.65■□□□□ 0.26
MBD3L3-201ENST00000333843 AATFQ9NY61 560 aaKnown RBP eCLIP16.65■□□□□ 0.26
MBD3L3-201ENST00000333843 PHIPQ8WWQ0 1821 aa16.64■□□□□ 0.25
MBD3L3-201ENST00000333843 CXCL11O14625 94 aa16.64■□□□□ 0.25
MBD3L3-201ENST00000333843 IDH1O75874 414 aaKnown RBP16.64■□□□□ 0.25
MBD3L3-201ENST00000333843 TBC1D2Q9BYX2 928 aa16.64■□□□□ 0.25
MBD3L3-201ENST00000333843 ZFYVE28Q9HCC9 887 aa16.64■□□□□ 0.25
MBD3L3-201ENST00000333843 PICK1Q9NRD5 415 aa16.64■□□□□ 0.25
MBD3L3-201ENST00000333843 HTTP42858 3142 aa16.64■□□□□ 0.25
MBD3L3-201ENST00000333843 PTPRFP10586 1907 aa16.64■□□□□ 0.25
MBD3L3-201ENST00000333843 FLT1P17948 1338 aa16.64■□□□□ 0.25
MBD3L3-201ENST00000333843 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
MBD3L3-201ENST00000333843 CYP7A1P22680 504 aa16.63■□□□□ 0.25
MBD3L3-201ENST00000333843 TAF1CQ15572 869 aaPredicted RBP16.63■□□□□ 0.25
MBD3L3-201ENST00000333843 ANKRD23Q86SG2 305 aa16.63■□□□□ 0.25
MBD3L3-201ENST00000333843 FAM43AQ8N2R8 423 aa16.63■□□□□ 0.25
MBD3L3-201ENST00000333843 ERO1AQ96HE7 468 aa16.63■□□□□ 0.25
MBD3L3-201ENST00000333843 R3HDMLQ9H3Y0 253 aa16.63■□□□□ 0.25
MBD3L3-201ENST00000333843 APBB1O00213 710 aa16.62■□□□□ 0.25
MBD3L3-201ENST00000333843 PTPRAP18433 802 aa16.62■□□□□ 0.25
MBD3L3-201ENST00000333843 ATP5JP18859 108 aa16.62■□□□□ 0.25
MBD3L3-201ENST00000333843 METTL16Q86W50 562 aaKnown RBP16.62■□□□□ 0.25
MBD3L3-201ENST00000333843 MAGEB6Q8N7X4 407 aa16.62■□□□□ 0.25
MBD3L3-201ENST00000333843 DCTPP1Q9H773 170 aa16.62■□□□□ 0.25
MBD3L3-201ENST00000333843 PI4KBQ9UBF8 816 aa16.62■□□□□ 0.25
MBD3L3-201ENST00000333843 BTBD19C9JJ37 291 aa16.61■□□□□ 0.25
MBD3L3-201ENST00000333843 FBXO46Q6PJ61 603 aaPredicted RBP16.61■□□□□ 0.25
MBD3L3-201ENST00000333843 ANTXR1Q9H6X2 564 aa16.61■□□□□ 0.25
MBD3L3-201ENST00000333843 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.61■□□□□ 0.25
MBD3L3-201ENST00000333843 LOC285556D6RIA3 1793 aa16.61■□□□□ 0.25
MBD3L3-201ENST00000333843 NAV1Q8NEY1 1877 aa16.61■□□□□ 0.25
MBD3L3-201ENST00000333843 MYH7P12883 1935 aa16.6■□□□□ 0.25
MBD3L3-201ENST00000333843 A0A0G2JLL6 359 aaPredicted RBP16.6■□□□□ 0.25
MBD3L3-201ENST00000333843 TLR2O60603 784 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms