RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 CHRNA5P30532 468 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 KRT40Q6A162 431 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 AMOTL1Q8IY63 956 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 ZNF444Q8N0Y2 327 aaPredicted RBP10.48□□□□□ -0.73
COPB2-201ENST00000333188 ZNF396Q96N95 335 aaPredicted RBP10.48□□□□□ -0.73
COPB2-201ENST00000333188 NBPF3Q9H094 633 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 MRVI1Q9Y6F6 885 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 AFDNP55196 1824 aaKnown RBP10.48□□□□□ -0.73
COPB2-201ENST00000333188 USP17L3A6NCW0 530 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 USP17L4A6NCW7 530 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 GOLGA6L19H0YKK7 550 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 CCDC192P0DO97 292 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 GYS1P13807 737 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 RASGRP2Q7LDG7 609 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 USP17L1Q7RTZ2 530 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 CLEC10AQ8IUN9 316 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 PGBD1Q96JS3 809 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 VIRMAQ69YN4 1812 aaKnown RBP10.48□□□□□ -0.73
COPB2-201ENST00000333188 TFAP4Q01664 338 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 SH3RF3Q8TEJ3 882 aaPredicted RBP10.48□□□□□ -0.73
COPB2-201ENST00000333188 STAMQ92783 540 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 ANKRD2Q9GZV1 360 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 CABP5Q9NP86 173 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 ADCY5O95622 1261 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 DEFB132Q7Z7B7 95 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 CATIPQ7Z7H3 387 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 KRT23Q9C075 422 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 CARMIL3Q8ND23 1372 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 KIF28PB7ZC32 967 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 EPB41L2O43491 1005 aaKnown RBP10.47□□□□□ -0.73
COPB2-201ENST00000333188 TSPY3P0CV98 308 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 TSPY8P0CW00 308 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 SF3B3Q15393 1217 aaKnown RBP10.47□□□□□ -0.73
COPB2-201ENST00000333188 ZNF804AQ7Z570 1209 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 FILIP1Q7Z7B0 1213 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 TEX11Q8IYF3 940 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 PLIN2Q99541 437 aa10.47□□□□□ -0.73
COPB2-201ENST00000333188 PDGFDQ9GZP0 370 aaPredicted RBP10.47□□□□□ -0.73
COPB2-201ENST00000333188 PLEKHA8P1O95397 391 aa10.46□□□□□ -0.73
COPB2-201ENST00000333188 IKQ13123 557 aaPredicted RBP10.46□□□□□ -0.73
COPB2-201ENST00000333188 DHX8Q14562 1220 aaKnown RBP10.46□□□□□ -0.73
COPB2-201ENST00000333188 ZNF654Q8IZM8 581 aa10.46□□□□□ -0.73
COPB2-201ENST00000333188 RNF41Q9H4P4 317 aaPredicted RBP10.46□□□□□ -0.73
COPB2-201ENST00000333188 KCNQ5Q9NR82 932 aa10.46□□□□□ -0.73
COPB2-201ENST00000333188 TACC3Q9Y6A5 838 aa10.46□□□□□ -0.73
COPB2-201ENST00000333188 PARP3Q9Y6F1 533 aa10.46□□□□□ -0.73
COPB2-201ENST00000333188 TCRBV5S4A2TA0A5A2 114 aa10.46□□□□□ -0.73
COPB2-201ENST00000333188 SH2B2O14492 632 aaPredicted RBP10.46□□□□□ -0.73
COPB2-201ENST00000333188 CTCFLQ8NI51 663 aaPredicted RBP10.46□□□□□ -0.73
COPB2-201ENST00000333188 GPKOWQ92917 476 aaPredicted RBP eCLIP10.46□□□□□ -0.736e-9■■□□□ 13.7
COPB2-201ENST00000333188 ZNF274Q96GC6 653 aaPredicted RBP10.46□□□□□ -0.73
COPB2-201ENST00000333188 HPS5Q9UPZ3 1129 aa10.46□□□□□ -0.73
COPB2-201ENST00000333188 RESTQ13127 1097 aa10.46□□□□□ -0.74
COPB2-201ENST00000333188 GRAPQ13588 217 aa10.46□□□□□ -0.74
COPB2-201ENST00000333188 DPP8Q6V1X1 898 aaPredicted RBP10.46□□□□□ -0.74
COPB2-201ENST00000333188 DIS3L2Q8IYB7 885 aaKnown RBP10.46□□□□□ -0.74
COPB2-201ENST00000333188 GRAPLQ8TC17 118 aaPredicted RBP10.46□□□□□ -0.74
COPB2-201ENST00000333188 RASGRP4Q8TDF6 673 aa10.46□□□□□ -0.74
COPB2-201ENST00000333188 KCNB2Q92953 911 aa10.46□□□□□ -0.74
COPB2-201ENST00000333188 RBM17Q96I25 401 aaKnown RBP10.46□□□□□ -0.74
COPB2-201ENST00000333188 SPTLC2O15270 562 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 CDKL5O76039 1030 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 SLC3A2P08195 630 aaKnown RBP10.45□□□□□ -0.74
COPB2-201ENST00000333188 ZNF165P49910 485 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 TYRO3Q06418 890 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 DDR1Q08345 913 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 TSGA10IPQ3SY00 556 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 COL23A1Q86Y22 540 aaPredicted RBP10.45□□□□□ -0.74
COPB2-201ENST00000333188 FBXO18Q8NFZ0 1043 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 NSUN4Q96CB9 384 aaKnown RBP10.45□□□□□ -0.74
COPB2-201ENST00000333188 FAM205CA6NFA0 338 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 BTDP43251 543 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 ZNF445P59923 1031 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 CCDC173Q0VFZ6 552 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 ZNF827Q17R98 1081 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 RBM26Q5T8P6 1007 aaKnown RBP10.45□□□□□ -0.74
COPB2-201ENST00000333188 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.45□□□□□ -0.74
COPB2-201ENST00000333188 ZSCAN16Q9H4T2 348 aaPredicted RBP10.45□□□□□ -0.74
COPB2-201ENST00000333188 LY9Q9HBG7 655 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 PCDHA7Q9UN72 937 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 TTF2Q9UNY4 1162 aaKnown RBP10.45□□□□□ -0.74
COPB2-201ENST00000333188 SPATA31A6Q5VVP1 1343 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 PHLPP1O60346 1717 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 BAG3O95817 575 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 RXRBP28702 533 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 CDC25AP30304 524 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 NLRP5P59047 1200 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 PDE4BQ07343 736 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 ZNF174Q15697 407 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 KLHL10Q6JEL2 608 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 FANCBQ8NB91 859 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 OXER1Q8TDS5 423 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 KAT14Q9H8E8 782 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 CNNM2Q9H8M5 875 aa10.45□□□□□ -0.74
COPB2-201ENST00000333188 TCHHQ07283 1943 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 COBLO75128 1261 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 CTR9Q6PD62 1173 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 DCP1AQ9NPI6 582 aaPredicted RBP10.44□□□□□ -0.74
COPB2-201ENST00000333188 POLLQ9UGP5 575 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 GNAT2P19087 354 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms