RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 MIGA2Q7L4E1 593 aa14.96□□□□□ -0.01
CMTM1-203ENST00000333001 CERS3Q8IU89 383 aa14.96□□□□□ -0.01
CMTM1-203ENST00000333001 SIRT2Q8IXJ6 389 aa14.96□□□□□ -0.01
CMTM1-203ENST00000333001 ZNF112Q9UJU3 913 aa14.96□□□□□ -0.01
CMTM1-203ENST00000333001 LAMB1P07942 1786 aa14.96□□□□□ -0.02
CMTM1-203ENST00000333001 OTOFQ9HC10 1997 aa14.95□□□□□ -0.02
CMTM1-203ENST00000333001 WDHD1O75717 1129 aaPredicted RBP14.95□□□□□ -0.02
CMTM1-203ENST00000333001 CYP2E1P05181 493 aaPredicted RBP14.95□□□□□ -0.02
CMTM1-203ENST00000333001 IFIT2P09913 472 aaKnown RBP14.95□□□□□ -0.02
CMTM1-203ENST00000333001 GJA5P36382 358 aa14.95□□□□□ -0.02
CMTM1-203ENST00000333001 ZAP70P43403 619 aa14.95□□□□□ -0.02
CMTM1-203ENST00000333001 PPATQ06203 517 aa14.95□□□□□ -0.02
CMTM1-203ENST00000333001 C20orf194Q5TEA3 1177 aa14.95□□□□□ -0.02
CMTM1-203ENST00000333001 ZNF384Q8TF68 577 aa14.95□□□□□ -0.02
CMTM1-203ENST00000333001 GPR25O00155 361 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 CETPP11597 493 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 RHBDL3P58872 404 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 PPP4CP60510 307 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 MAP3K10Q02779 954 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 MAP3K12Q12852 859 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 PPIL2Q13356 520 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 SNAPC2Q13487 334 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 PICALMQ13492 652 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 TTF1Q15361 905 aaPredicted RBP14.94□□□□□ -0.02
CMTM1-203ENST00000333001 PKN2Q16513 984 aaKnown RBP14.94□□□□□ -0.02
CMTM1-203ENST00000333001 NOL9Q5SY16 702 aaKnown RBP14.94□□□□□ -0.02
CMTM1-203ENST00000333001 CTU1Q7Z7A3 348 aaKnown RBP14.94□□□□□ -0.02
CMTM1-203ENST00000333001 ZKSCAN4Q969J2 545 aaPredicted RBP14.94□□□□□ -0.02
CMTM1-203ENST00000333001 OTUD5Q96G74 571 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 MS4A4AQ96JQ5 239 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 IL1RAPL2Q9NP60 686 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 TLR7Q9NYK1 1049 aaKnown RBP14.94□□□□□ -0.02
CMTM1-203ENST00000333001 SNCAIPQ9Y6H5 919 aa14.94□□□□□ -0.02
CMTM1-203ENST00000333001 TBC1D12O60347 775 aa14.93□□□□□ -0.02
CMTM1-203ENST00000333001 FKTNO75072 461 aa14.93□□□□□ -0.02
CMTM1-203ENST00000333001 SOX10P56693 466 aa14.93□□□□□ -0.02
CMTM1-203ENST00000333001 ZFPM1Q8IX07 1006 aa14.93□□□□□ -0.02
CMTM1-203ENST00000333001 TEX11Q8IYF3 940 aa14.93□□□□□ -0.02
CMTM1-203ENST00000333001 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.93□□□□□ -0.02
CMTM1-203ENST00000333001 ZNF296Q8WUU4 475 aaPredicted RBP14.93□□□□□ -0.02
CMTM1-203ENST00000333001 ZCCHC17Q9NP64 241 aaKnown RBP14.93□□□□□ -0.02
CMTM1-203ENST00000333001 RFX7Q2KHR2 1363 aa14.93□□□□□ -0.02
CMTM1-203ENST00000333001 CCL15-CCL14A0A0B4J2E2 113 aa14.92□□□□□ -0.02
CMTM1-203ENST00000333001 APBB1O00213 710 aa14.92□□□□□ -0.02
CMTM1-203ENST00000333001 IGF2BP3O00425 579 aaKnown RBP eCLIP14.92□□□□□ -0.02
CMTM1-203ENST00000333001 IDH1O75874 414 aaKnown RBP14.92□□□□□ -0.02
CMTM1-203ENST00000333001 INPP5BP32019 993 aa14.92□□□□□ -0.02
CMTM1-203ENST00000333001 CCL15Q16663 113 aa14.92□□□□□ -0.02
CMTM1-203ENST00000333001 DHX36Q9H2U1 1008 aaKnown RBP14.92□□□□□ -0.02
CMTM1-203ENST00000333001 DDX4Q9NQI0 724 aaKnown RBP14.92□□□□□ -0.02
CMTM1-203ENST00000333001 PICK1Q9NRD5 415 aa14.92□□□□□ -0.02
CMTM1-203ENST00000333001 ATRNL1Q5VV63 1379 aa14.92□□□□□ -0.02
CMTM1-203ENST00000333001 COL2A1P02458 1487 aaPredicted RBP14.91□□□□□ -0.02
CMTM1-203ENST00000333001 DDTLA6NHG4 134 aaPredicted RBP14.91□□□□□ -0.02
CMTM1-203ENST00000333001 IRF6O14896 467 aa14.91□□□□□ -0.02
CMTM1-203ENST00000333001 CTNND1O60716 968 aaKnown RBP14.91□□□□□ -0.02
CMTM1-203ENST00000333001 SH3BP5LQ7L8J4 393 aa14.91□□□□□ -0.02
CMTM1-203ENST00000333001 CNKSR2Q8WXI2 1034 aa14.91□□□□□ -0.02
CMTM1-203ENST00000333001 PTPN18Q99952 460 aa14.91□□□□□ -0.02
CMTM1-203ENST00000333001 LRRCC1Q9C099 1032 aa14.91□□□□□ -0.02
CMTM1-203ENST00000333001 OSBPL5Q9H0X9 879 aaPredicted RBP14.91□□□□□ -0.02
CMTM1-203ENST00000333001 PIH1D3Q9NQM4 214 aaKnown RBP14.91□□□□□ -0.02
CMTM1-203ENST00000333001 AATFQ9NY61 560 aaKnown RBP eCLIP14.91□□□□□ -0.02
CMTM1-203ENST00000333001 DOCK2Q92608 1830 aa14.91□□□□□ -0.02
CMTM1-203ENST00000333001 PHF20L1A8MW92 1017 aa14.9□□□□□ -0.02
CMTM1-203ENST00000333001 CXCL11O14625 94 aa14.9□□□□□ -0.02
CMTM1-203ENST00000333001 CYP7A1P22680 504 aa14.9□□□□□ -0.02
CMTM1-203ENST00000333001 SCYL3Q8IZE3 742 aa14.9□□□□□ -0.02
CMTM1-203ENST00000333001 SH3RF3Q8TEJ3 882 aaPredicted RBP14.9□□□□□ -0.02
CMTM1-203ENST00000333001 BRI3BPQ8WY22 251 aa14.9□□□□□ -0.02
CMTM1-203ENST00000333001 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.9□□□□□ -0.02
CMTM1-203ENST00000333001 ZFYVE28Q9HCC9 887 aa14.9□□□□□ -0.02
CMTM1-203ENST00000333001 PI4KBQ9UBF8 816 aa14.9□□□□□ -0.02
CMTM1-203ENST00000333001 MAST2Q6P0Q8 1798 aa14.9□□□□□ -0.02
CMTM1-203ENST00000333001 RRP1P56182 461 aaKnown RBP14.89□□□□□ -0.03
CMTM1-203ENST00000333001 ARHGEF6Q15052 776 aa14.89□□□□□ -0.03
CMTM1-203ENST00000333001 YTHDC1Q96MU7 727 aaKnown RBP14.89□□□□□ -0.03
CMTM1-203ENST00000333001 HERC5Q9UII4 1024 aaKnown RBP14.89□□□□□ -0.03
CMTM1-203ENST00000333001 KCNH4Q9UQ05 1017 aa14.89□□□□□ -0.03
CMTM1-203ENST00000333001 MYO5AQ9Y4I1 1855 aaKnown RBP14.89□□□□□ -0.03
CMTM1-203ENST00000333001 ATP5JP18859 108 aa14.88□□□□□ -0.03
CMTM1-203ENST00000333001 CRHR2Q13324 411 aa14.88□□□□□ -0.03
CMTM1-203ENST00000333001 TAF1CQ15572 869 aaPredicted RBP14.88□□□□□ -0.03
CMTM1-203ENST00000333001 FOXP4Q8IVH2 680 aaPredicted RBP14.88□□□□□ -0.03
CMTM1-203ENST00000333001 MAGEB6Q8N7X4 407 aa14.88□□□□□ -0.03
CMTM1-203ENST00000333001 TGFBRAP1Q8WUH2 860 aa14.88□□□□□ -0.03
CMTM1-203ENST00000333001 ERO1AQ96HE7 468 aa14.88□□□□□ -0.03
CMTM1-203ENST00000333001 TBC1D2Q9BYX2 928 aa14.88□□□□□ -0.03
CMTM1-203ENST00000333001 DCTPP1Q9H773 170 aa14.88□□□□□ -0.03
CMTM1-203ENST00000333001 PTPRAP18433 802 aa14.87□□□□□ -0.03
CMTM1-203ENST00000333001 SP3Q02447 781 aa14.87□□□□□ -0.03
CMTM1-203ENST00000333001 PRPF38BQ5VTL8 546 aaKnown RBP14.87□□□□□ -0.03
CMTM1-203ENST00000333001 FASTKD5Q7L8L6 764 aaKnown RBP14.87□□□□□ -0.03
CMTM1-203ENST00000333001 ADGRA1Q86SQ6 560 aa14.87□□□□□ -0.03
CMTM1-203ENST00000333001 TRIM34Q9BYJ4 488 aa14.87□□□□□ -0.03
CMTM1-203ENST00000333001 R3HDMLQ9H3Y0 253 aa14.87□□□□□ -0.03
CMTM1-203ENST00000333001 ANTXR1Q9H6X2 564 aa14.87□□□□□ -0.03
CMTM1-203ENST00000333001 HPS5Q9UPZ3 1129 aa14.87□□□□□ -0.03
CMTM1-203ENST00000333001 ZHX2Q9Y6X8 837 aa14.87□□□□□ -0.03
CMTM1-203ENST00000333001 BTBD19C9JJ37 291 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms