RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 WWC2Q6AWC2 1192 aa20.76■□□□□ 0.91
PKP3-201ENST00000331563 DNAJC21Q5F1R6 531 aaKnown RBP20.76■□□□□ 0.91
PKP3-201ENST00000331563 CLIC4Q9Y696 253 aa20.76■□□□□ 0.91
PKP3-201ENST00000331563 A0A1W2PQ27 194 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 A0A1W2PQ64 194 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 A0A1W2PQD8 194 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 MAP2K7O14733 419 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 CTDNEP1O95476 244 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 NKX1-1Q15270 411 aaPredicted RBP20.75■□□□□ 0.91
PKP3-201ENST00000331563 DNAJC10Q8IXB1 793 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 PLEKHA4Q9H4M7 779 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 SNRKQ9NRH2 765 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 TAOK2Q9UL54 1235 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 MRC1P22897 1456 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 ERLIN1O75477 346 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 CYP21A2P08686 494 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 MYL5Q02045 173 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 OTUD7BQ6GQQ9 843 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 TOGARAM2Q6ZUX3 1019 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 ILDR1Q86SU0 546 aaPredicted RBP20.75■□□□□ 0.91
PKP3-201ENST00000331563 DESI2Q9BSY9 194 aa20.75■□□□□ 0.91
PKP3-201ENST00000331563 IKBKBO14920 756 aa20.74■□□□□ 0.91
PKP3-201ENST00000331563 VSTM4Q8IW00 320 aa20.74■□□□□ 0.91
PKP3-201ENST00000331563 RTEL1Q9NZ71 1219 aa20.74■□□□□ 0.91
PKP3-201ENST00000331563 NDUFB9Q9Y6M9 179 aa20.74■□□□□ 0.91
PKP3-201ENST00000331563 SPTLC2O15270 562 aa20.74■□□□□ 0.91
PKP3-201ENST00000331563 RPS6KA5O75582 802 aa20.74■□□□□ 0.91
PKP3-201ENST00000331563 LINC00301Q8NCQ3 95 aa20.74■□□□□ 0.91
PKP3-201ENST00000331563 KCNG4Q8TDN1 519 aa20.74■□□□□ 0.91
PKP3-201ENST00000331563 CCDC85AQ96PX6 553 aaPredicted RBP20.74■□□□□ 0.91
PKP3-201ENST00000331563 SUGCTQ9HAC7 445 aa20.74■□□□□ 0.91
PKP3-201ENST00000331563 U3KPZ7 1027 aaPredicted RBP20.74■□□□□ 0.91
PKP3-201ENST00000331563 CPP00450 1065 aa20.73■□□□□ 0.91
PKP3-201ENST00000331563 PLBD2Q8NHP8 589 aa20.73■□□□□ 0.91
PKP3-201ENST00000331563 MKRN1Q9UHC7 482 aaKnown RBP20.73■□□□□ 0.91
PKP3-201ENST00000331563 UTYO14607 1347 aa20.73■□□□□ 0.91
PKP3-201ENST00000331563 ADKP55263 362 aaKnown RBP20.73■□□□□ 0.91
PKP3-201ENST00000331563 SYNE3Q6ZMZ3 975 aa20.73■□□□□ 0.91
PKP3-201ENST00000331563 ABCC6O95255 1503 aa20.72■□□□□ 0.91
PKP3-201ENST00000331563 WDHD1O75717 1129 aaPredicted RBP20.72■□□□□ 0.91
PKP3-201ENST00000331563 BEND6Q5SZJ8 279 aaPredicted RBP20.72■□□□□ 0.91
PKP3-201ENST00000331563 IRX2Q9BZI1 471 aaPredicted RBP20.72■□□□□ 0.91
PKP3-201ENST00000331563 LZTFL1Q9NQ48 299 aa20.72■□□□□ 0.91
PKP3-201ENST00000331563 HSP90AB3PQ58FF7 597 aa20.72■□□□□ 0.91
PKP3-201ENST00000331563 USPL1Q5W0Q7 1092 aa20.72■□□□□ 0.91
PKP3-201ENST00000331563 LMBR1LQ6UX01 489 aa20.72■□□□□ 0.91
PKP3-201ENST00000331563 OLFM4Q6UX06 510 aa20.72■□□□□ 0.91
PKP3-201ENST00000331563 KIFC2Q96AC6 838 aa20.72■□□□□ 0.91
PKP3-201ENST00000331563 FANCLQ9NW38 375 aa20.72■□□□□ 0.91
PKP3-201ENST00000331563 CHGBP05060 677 aa20.71■□□□□ 0.91
PKP3-201ENST00000331563 RHOXF2BP0C7M4 288 aa20.71■□□□□ 0.91
PKP3-201ENST00000331563 DHX32Q7L7V1 743 aaKnown RBP20.71■□□□□ 0.91
PKP3-201ENST00000331563 SRGAP1Q7Z6B7 1085 aa20.71■□□□□ 0.91
PKP3-201ENST00000331563 RHOXF2Q9BQY4 288 aa20.71■□□□□ 0.91
PKP3-201ENST00000331563 ABCB6Q9NP58 842 aa20.71■□□□□ 0.91
PKP3-201ENST00000331563 CCDC196A0A1B0GTZ2 297 aa20.71■□□□□ 0.91
PKP3-201ENST00000331563 PFKFB1P16118 471 aa20.71■□□□□ 0.91
PKP3-201ENST00000331563 GRIPAP1Q4V328 841 aa20.71■□□□□ 0.91
PKP3-201ENST00000331563 CHST3Q7LGC8 479 aa20.71■□□□□ 0.91
PKP3-201ENST00000331563 CNNM3Q8NE01 707 aa20.71■□□□□ 0.91
PKP3-201ENST00000331563 HSD3B7Q9H2F3 369 aa20.71■□□□□ 0.91
PKP3-201ENST00000331563 PARP4Q9UKK3 1724 aaKnown RBP20.71■□□□□ 0.91
PKP3-201ENST00000331563 ACSBG1Q96GR2 724 aa20.7■□□□□ 0.9
PKP3-201ENST00000331563 AKAP2Q9Y2D5 859 aa20.7■□□□□ 0.9
PKP3-201ENST00000331563 TMEM139Q8IV31 216 aa20.7■□□□□ 0.9
PKP3-201ENST00000331563 EFCAB13Q8IY85 973 aa20.7■□□□□ 0.9
PKP3-201ENST00000331563 CCDC189A1A4V9 331 aa20.69■□□□□ 0.9
PKP3-201ENST00000331563 MARCKSP29966 332 aaPredicted RBP20.69■□□□□ 0.9
PKP3-201ENST00000331563 SYNE4Q8N205 404 aa20.69■□□□□ 0.9
PKP3-201ENST00000331563 EXOC5O00471 708 aa20.69■□□□□ 0.9
PKP3-201ENST00000331563 STX10O60499 249 aa20.69■□□□□ 0.9
PKP3-201ENST00000331563 CUTAO60888 179 aa20.69■□□□□ 0.9
PKP3-201ENST00000331563 HMGB1P09429 215 aaKnown RBP20.69■□□□□ 0.9
PKP3-201ENST00000331563 PTPN12Q05209 780 aaKnown RBP20.69■□□□□ 0.9
PKP3-201ENST00000331563 LRRC31Q6UY01 552 aa20.69■□□□□ 0.9
PKP3-201ENST00000331563 FAM212AQ96EL1 285 aa20.69■□□□□ 0.9
PKP3-201ENST00000331563 SLC4A9Q96Q91 983 aa20.69■□□□□ 0.9
PKP3-201ENST00000331563 PNKPQ96T60 521 aa20.69■□□□□ 0.9
PKP3-201ENST00000331563 ANKZF1Q9H8Y5 726 aa20.69■□□□□ 0.9
PKP3-201ENST00000331563 GLI3P10071 1580 aa20.69■□□□□ 0.9
PKP3-201ENST00000331563 POTEB2H3BUK9 544 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 SYKP43405 635 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 STOX1Q6ZVD7 989 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 MICALL1Q8N3F8 863 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 HNRNPLLQ8WVV9 542 aaKnown RBP20.68■□□□□ 0.9
PKP3-201ENST00000331563 ZNF594Q96JF6 807 aaPredicted RBP20.68■□□□□ 0.9
PKP3-201ENST00000331563 TFCP2Q12800 502 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 C8orf76Q96K31 380 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 SHANK3Q9BYB0 1731 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 CARMIL3Q8ND23 1372 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 NEDD4P46934 1319 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 KIF4BQ2VIQ3 1234 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 CEP112Q8N8E3 955 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 FAM204AQ9H8W3 233 aa20.68■□□□□ 0.9
PKP3-201ENST00000331563 KCPQ6ZWJ8 1503 aa20.67■□□□□ 0.9
PKP3-201ENST00000331563 PNOCQ13519 176 aa20.67■□□□□ 0.9
PKP3-201ENST00000331563 CASP8Q14790 479 aa20.67■□□□□ 0.9
PKP3-201ENST00000331563 ACBD3Q9H3P7 528 aa20.67■□□□□ 0.9
PKP3-201ENST00000331563 YEATS4O95619 227 aa20.67■□□□□ 0.9
PKP3-201ENST00000331563 GPTP24298 496 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms