RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 TTLL7Q6ZT98 887 aa20.78■□□□□ 0.92
CLSTN3-202ENST00000331148 TOGARAM2Q6ZUX3 1019 aa20.78■□□□□ 0.92
CLSTN3-202ENST00000331148 DDX46Q7L014 1031 aaKnown RBP20.78■□□□□ 0.92
CLSTN3-202ENST00000331148 CERS3Q8IU89 383 aa20.78■□□□□ 0.92
CLSTN3-202ENST00000331148 CHMP4CQ96CF2 233 aa20.78■□□□□ 0.92
CLSTN3-202ENST00000331148 HAUS7Q99871 368 aa20.78■□□□□ 0.92
CLSTN3-202ENST00000331148 INTS13Q9NVM9 706 aa20.78■□□□□ 0.92
CLSTN3-202ENST00000331148 USP21Q9UK80 565 aa20.78■□□□□ 0.92
CLSTN3-202ENST00000331148 ARFGEF2Q9Y6D5 1785 aa20.78■□□□□ 0.92
CLSTN3-202ENST00000331148 E7EWF7 191 aa20.78■□□□□ 0.92
CLSTN3-202ENST00000331148 C8orf76Q96K31 380 aa20.78■□□□□ 0.92
CLSTN3-202ENST00000331148 MYO1BO43795 1136 aa20.77■□□□□ 0.92
CLSTN3-202ENST00000331148 LEKR1Q6ZMV7 388 aa20.77■□□□□ 0.92
CLSTN3-202ENST00000331148 BRAPQ7Z569 592 aa20.77■□□□□ 0.92
CLSTN3-202ENST00000331148 A0A0G2JLW4 131 aa20.76■□□□□ 0.91
CLSTN3-202ENST00000331148 TFCP2Q12800 502 aa20.76■□□□□ 0.91
CLSTN3-202ENST00000331148 TBX2Q13207 712 aaPredicted RBP20.76■□□□□ 0.91
CLSTN3-202ENST00000331148 EPHA10Q5JZY3 1008 aa20.76■□□□□ 0.91
CLSTN3-202ENST00000331148 ANO1Q5XXA6 986 aa20.76■□□□□ 0.91
CLSTN3-202ENST00000331148 CTR9Q6PD62 1173 aa20.76■□□□□ 0.91
CLSTN3-202ENST00000331148 CHST3Q7LGC8 479 aa20.76■□□□□ 0.91
CLSTN3-202ENST00000331148 ACSBG1Q96GR2 724 aa20.76■□□□□ 0.91
CLSTN3-202ENST00000331148 DSCC1Q9BVC3 393 aa20.76■□□□□ 0.91
CLSTN3-202ENST00000331148 IVLP07476 585 aa20.76■□□□□ 0.91
CLSTN3-202ENST00000331148 SLC4A9Q96Q91 983 aa20.76■□□□□ 0.91
CLSTN3-202ENST00000331148 A0A0G2JS52 829 aa20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 ATP5J2-PTCD1G3V325 749 aa20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 STX10O60499 249 aa20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 KBTBD3Q8NAB2 608 aa20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 DBNDD2Q9BQY9 259 aa20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 PDE11AQ9HCR9 933 aa20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 FANCLQ9NW38 375 aa20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 VPS18Q9P253 973 aa20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 WDHD1O75717 1129 aaPredicted RBP20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 SYKP43405 635 aa20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 SYNE3Q6ZMZ3 975 aa20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 ZFP91Q96JP5 570 aaPredicted RBP20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 COPRSQ9NQ92 184 aa20.75■□□□□ 0.91
CLSTN3-202ENST00000331148 KIF28PB7ZC32 967 aa20.74■□□□□ 0.91
CLSTN3-202ENST00000331148 MEX3CQ5U5Q3 659 aaKnown RBP20.74■□□□□ 0.91
CLSTN3-202ENST00000331148 HNRNPLLQ8WVV9 542 aaKnown RBP20.74■□□□□ 0.91
CLSTN3-202ENST00000331148 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.74■□□□□ 0.91
CLSTN3-202ENST00000331148 CYP19A1P11511 503 aaPredicted RBP20.74■□□□□ 0.91
CLSTN3-202ENST00000331148 CHMP4BP1P59074 171 aa20.74■□□□□ 0.91
CLSTN3-202ENST00000331148 CCDC12Q8WUD4 166 aaPredicted RBP20.74■□□□□ 0.91
CLSTN3-202ENST00000331148 ZBTB3Q9H5J0 574 aa20.74■□□□□ 0.91
CLSTN3-202ENST00000331148 AFDNP55196 1824 aaKnown RBP20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 PNOCQ13519 176 aa20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 BEND6Q5SZJ8 279 aaPredicted RBP20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 GOLGA6L1Q8N7Z2 621 aa20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 PDILTQ8N807 584 aa20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 TC2NQ8N9U0 490 aa20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 HELLSQ9NRZ9 838 aa20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 HPSEQ9Y251 543 aa20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 KARSQ15046 597 aaKnown RBP20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 OLFM4Q6UX06 510 aa20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 ANKZF1Q9H8Y5 726 aa20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 ZNF330Q9Y3S2 320 aaPredicted RBP20.73■□□□□ 0.91
CLSTN3-202ENST00000331148 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 A0A087WZG4 1122 aa20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 RPS6KA5O75582 802 aa20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 MARCKSP29966 332 aaPredicted RBP20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 RFX5P48382 616 aaPredicted RBP20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 MCM6Q14566 821 aa20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 HDXQ7Z353 690 aa20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 SRGAP1Q7Z6B7 1085 aa20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 DESI2Q9BSY9 194 aa20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 ZSWIM4Q9H7M6 989 aa20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 GPHNQ9NQX3 736 aaPredicted RBP20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 NUP188Q5SRE5 1749 aa20.72■□□□□ 0.91
CLSTN3-202ENST00000331148 CUTAO60888 179 aa20.71■□□□□ 0.91
CLSTN3-202ENST00000331148 USP5P45974 858 aa20.71■□□□□ 0.91
CLSTN3-202ENST00000331148 KIF23Q02241 960 aaPredicted RBP20.71■□□□□ 0.91
CLSTN3-202ENST00000331148 SLC39A14Q15043 492 aa20.71■□□□□ 0.91
CLSTN3-202ENST00000331148 NOM1Q5C9Z4 860 aaKnown RBP20.71■□□□□ 0.91
CLSTN3-202ENST00000331148 YY1AP1Q9H869 796 aa20.71■□□□□ 0.91
CLSTN3-202ENST00000331148 GJB4Q9NTQ9 266 aa20.71■□□□□ 0.91
CLSTN3-202ENST00000331148 ADKP55263 362 aaKnown RBP20.71■□□□□ 0.91
CLSTN3-202ENST00000331148 PTPN12Q05209 780 aaKnown RBP20.71■□□□□ 0.91
CLSTN3-202ENST00000331148 FBXL16Q8N461 479 aa20.71■□□□□ 0.91
CLSTN3-202ENST00000331148 MSL3Q8N5Y2 521 aaKnown RBP20.71■□□□□ 0.91
CLSTN3-202ENST00000331148 HSPD1P10809 573 aaKnown RBP20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 ICE2Q659A1 982 aa20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 UBE3BQ7Z3V4 1068 aa20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 ZBTB9Q96C00 473 aa20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 MRPL44Q9H9J2 332 aaKnown RBP20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 RAB21Q9UL25 225 aa20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 A0A1B0GUL7 405 aa20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 POTEB2H3BUK9 544 aa20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 EIF3JO75822 258 aaKnown RBP20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 SPECC1LQ69YQ0 1117 aa20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 FOXR1Q6PIV2 292 aa20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 SHC4Q6S5L8 630 aa20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 KIF6Q6ZMV9 814 aa20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 CWC25Q9NXE8 425 aaPredicted RBP20.7■□□□□ 0.9
CLSTN3-202ENST00000331148 MAGEA9P43362 315 aa20.69■□□□□ 0.9
CLSTN3-202ENST00000331148 ZMYM1Q5SVZ6 1142 aa20.69■□□□□ 0.9
CLSTN3-202ENST00000331148 MSANTD4Q8NCY6 345 aa20.69■□□□□ 0.9
CLSTN3-202ENST00000331148 PNKPQ96T60 521 aa20.69■□□□□ 0.9
CLSTN3-202ENST00000331148 FAN1Q9Y2M0 1017 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms