RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 AKAP17AQ02040 695 aaKnown RBP20.78■□□□□ 0.92
SOCS3-201ENST00000330871 MYSM1Q5VVJ2 828 aa20.78■□□□□ 0.92
SOCS3-201ENST00000330871 RIC3Q7Z5B4 369 aa20.78■□□□□ 0.92
SOCS3-201ENST00000330871 DHX37Q8IY37 1157 aaKnown RBP20.78■□□□□ 0.92
SOCS3-201ENST00000330871 JPH2Q9BR39 696 aaPredicted RBP20.78■□□□□ 0.92
SOCS3-201ENST00000330871 POLR3EQ9NVU0 708 aa20.78■□□□□ 0.92
SOCS3-201ENST00000330871 ADGRG1Q9Y653 693 aa20.78■□□□□ 0.92
SOCS3-201ENST00000330871 LTN1O94822 1766 aa20.78■□□□□ 0.92
SOCS3-201ENST00000330871 YEATS4O95619 227 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 CMA1P23946 247 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 PDIA3P30101 505 aaKnown RBP20.77■□□□□ 0.92
SOCS3-201ENST00000330871 CEBPAP49715 358 aaPredicted RBP20.77■□□□□ 0.92
SOCS3-201ENST00000330871 SYNE3Q6ZMZ3 975 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 TRMT44Q8IYL2 757 aaKnown RBP20.77■□□□□ 0.92
SOCS3-201ENST00000330871 NCAPD2Q15021 1401 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 CTAGE9A4FU28 777 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 KIF28PB7ZC32 967 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 TDO2P48775 406 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 NCAPH2Q6IBW4 605 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 RAB11FIP4Q86YS3 637 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 FOXP4Q8IVH2 680 aaPredicted RBP20.77■□□□□ 0.92
SOCS3-201ENST00000330871 C19orf44Q9H6X5 657 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 KAT14Q9H8E8 782 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 RAI14Q9P0K7 980 aa20.77■□□□□ 0.92
SOCS3-201ENST00000330871 SETD1BQ9UPS6 1966 aaKnown RBP20.77■□□□□ 0.91
SOCS3-201ENST00000330871 CCDC196A0A1B0GTZ2 297 aa20.77■□□□□ 0.91
SOCS3-201ENST00000330871 BMP6P22004 513 aa20.77■□□□□ 0.91
SOCS3-201ENST00000330871 NEXNQ0ZGT2 675 aa20.77■□□□□ 0.91
SOCS3-201ENST00000330871 GPHNQ9NQX3 736 aaPredicted RBP20.77■□□□□ 0.91
SOCS3-201ENST00000330871 PHF8Q9UPP1 1060 aa20.77■□□□□ 0.91
SOCS3-201ENST00000330871 ARHGAP23Q9P227 1491 aa20.76■□□□□ 0.91
SOCS3-201ENST00000330871 EBAG9O00559 213 aa20.76■□□□□ 0.91
SOCS3-201ENST00000330871 KCNA6P17658 529 aa20.76■□□□□ 0.91
SOCS3-201ENST00000330871 KCNH5Q8NCM2 988 aa20.76■□□□□ 0.91
SOCS3-201ENST00000330871 C8orf76Q96K31 380 aa20.76■□□□□ 0.91
SOCS3-201ENST00000330871 CDHR2Q9BYE9 1310 aa20.76■□□□□ 0.91
SOCS3-201ENST00000330871 FAM107BQ9H098 131 aa20.76■□□□□ 0.91
SOCS3-201ENST00000330871 FOXN1O15353 648 aa20.76■□□□□ 0.91
SOCS3-201ENST00000330871 MCMDC2Q4G0Z9 681 aa20.76■□□□□ 0.91
SOCS3-201ENST00000330871 ANO1Q5XXA6 986 aa20.76■□□□□ 0.91
SOCS3-201ENST00000330871 DBNLQ9UJU6 430 aaKnown RBP20.76■□□□□ 0.91
SOCS3-201ENST00000330871 HMGB1P09429 215 aaKnown RBP20.75■□□□□ 0.91
SOCS3-201ENST00000330871 TEX13AQ9BXU3 409 aaPredicted RBP20.75■□□□□ 0.91
SOCS3-201ENST00000330871 COPRSQ9NQ92 184 aa20.75■□□□□ 0.91
SOCS3-201ENST00000330871 NFE2L3Q9Y4A8 694 aa20.75■□□□□ 0.91
SOCS3-201ENST00000330871 PCDHA5Q9Y5H7 936 aa20.75■□□□□ 0.91
SOCS3-201ENST00000330871 OVOS2A0A0G2JMS6 1433 aa20.75■□□□□ 0.91
SOCS3-201ENST00000330871 RFX7Q2KHR2 1363 aa20.75■□□□□ 0.91
SOCS3-201ENST00000330871 KIF1CO43896 1103 aaKnown RBP20.75■□□□□ 0.91
SOCS3-201ENST00000330871 PDIA6Q15084 440 aa20.75■□□□□ 0.91
SOCS3-201ENST00000330871 TTC19Q6DKK2 380 aaPredicted RBP20.75■□□□□ 0.91
SOCS3-201ENST00000330871 ZNF609O15014 1411 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 NEURL1BA8MQ27 555 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 SCP2P22307 547 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 FMR1Q06787 632 aaKnown RBP eCLIP20.74■□□□□ 0.91
SOCS3-201ENST00000330871 TNNI3KQ59H18 835 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 CPLX2Q6PUV4 134 aaKnown RBP20.74■□□□□ 0.91
SOCS3-201ENST00000330871 METTL16Q86W50 562 aaKnown RBP20.74■□□□□ 0.91
SOCS3-201ENST00000330871 CARD10Q9BWT7 1032 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 HPCAL4Q9UM19 191 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 CCDC9Q9Y3X0 531 aaKnown RBP20.74■□□□□ 0.91
SOCS3-201ENST00000330871 SAMM50Q9Y512 469 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 FPGT-TNNI3KV9GXZ4 949 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 MRC1P22897 1456 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 ZMYND10O75800 440 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 INPP5BP32019 993 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 GGCXP38435 758 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 GCKRQ14397 625 aa20.74■□□□□ 0.91
SOCS3-201ENST00000330871 IRAK1P51617 712 aa20.73■□□□□ 0.91
SOCS3-201ENST00000330871 ZNF827Q17R98 1081 aa20.73■□□□□ 0.91
SOCS3-201ENST00000330871 EPHA10Q5JZY3 1008 aa20.73■□□□□ 0.91
SOCS3-201ENST00000330871 GSPT2Q8IYD1 628 aaKnown RBP20.73■□□□□ 0.91
SOCS3-201ENST00000330871 NFAT5O94916 1531 aa20.73■□□□□ 0.91
SOCS3-201ENST00000330871 AKR1B15C9JRZ8 316 aaPredicted RBP20.73■□□□□ 0.91
SOCS3-201ENST00000330871 AARSP49588 968 aaKnown RBP eCLIP20.73■□□□□ 0.91
SOCS3-201ENST00000330871 SHC4Q6S5L8 630 aa20.73■□□□□ 0.91
SOCS3-201ENST00000330871 ACRBPQ8NEB7 543 aa20.73■□□□□ 0.91
SOCS3-201ENST00000330871 BCAS4Q8TDM0 211 aa20.73■□□□□ 0.91
SOCS3-201ENST00000330871 CAPN7Q9Y6W3 813 aa20.73■□□□□ 0.91
SOCS3-201ENST00000330871 MYO1FO00160 1098 aa20.72■□□□□ 0.91
SOCS3-201ENST00000330871 USP8P40818 1118 aa20.72■□□□□ 0.91
SOCS3-201ENST00000330871 LONRF3Q496Y0 759 aa20.72■□□□□ 0.91
SOCS3-201ENST00000330871 THEMISQ8N1K5 641 aaPredicted RBP20.72■□□□□ 0.91
SOCS3-201ENST00000330871 SAMSN1Q9NSI8 373 aaKnown RBP20.72■□□□□ 0.91
SOCS3-201ENST00000330871 TEX33O43247 280 aa20.72■□□□□ 0.91
SOCS3-201ENST00000330871 IBSPP21815 317 aaPredicted RBP20.72■□□□□ 0.91
SOCS3-201ENST00000330871 EXOSC10Q01780 885 aaKnown RBP20.72■□□□□ 0.91
SOCS3-201ENST00000330871 TFCP2Q12800 502 aa20.71■□□□□ 0.91
SOCS3-201ENST00000330871 GBP6Q6ZN66 633 aa20.71■□□□□ 0.91
SOCS3-201ENST00000330871 DDX46Q7L014 1031 aaKnown RBP20.71■□□□□ 0.91
SOCS3-201ENST00000330871 ARHGEF25Q86VW2 580 aa20.71■□□□□ 0.91
SOCS3-201ENST00000330871 NAPGQ99747 312 aaPredicted RBP20.71■□□□□ 0.91
SOCS3-201ENST00000330871 PXDNQ92626 1479 aa20.71■□□□□ 0.91
SOCS3-201ENST00000330871 RBL2Q08999 1139 aa20.71■□□□□ 0.91
SOCS3-201ENST00000330871 CTCFLQ8NI51 663 aaPredicted RBP20.71■□□□□ 0.91
SOCS3-201ENST00000330871 PIP4K2BP78356 416 aa20.7■□□□□ 0.9
SOCS3-201ENST00000330871 PTPN12Q05209 780 aaKnown RBP20.7■□□□□ 0.9
SOCS3-201ENST00000330871 STIM1Q13586 685 aa20.7■□□□□ 0.9
SOCS3-201ENST00000330871 FAM76AQ8TAV0 307 aa20.7■□□□□ 0.9
SOCS3-201ENST00000330871 HAUS7Q99871 368 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms