RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 TIMM10P62072 90 aa23.39■■□□□ 1.34
CMTM4-201ENST00000330687 EPHA10Q5JZY3 1008 aa23.39■■□□□ 1.34
CMTM4-201ENST00000330687 VPS37DQ86XT2 251 aa23.39■■□□□ 1.34
CMTM4-201ENST00000330687 TRDNQ13061 729 aa23.39■■□□□ 1.33
CMTM4-201ENST00000330687 STAMQ92783 540 aa23.39■■□□□ 1.33
CMTM4-201ENST00000330687 TEX13AQ9BXU3 409 aaPredicted RBP23.39■■□□□ 1.33
CMTM4-201ENST00000330687 CEP57Q86XR8 500 aa23.39■■□□□ 1.33
CMTM4-201ENST00000330687 MYD88Q99836 296 aa23.39■■□□□ 1.33
CMTM4-201ENST00000330687 ZNF609O15014 1411 aa23.39■■□□□ 1.33
CMTM4-201ENST00000330687 PRC1O43663 620 aa23.38■■□□□ 1.33
CMTM4-201ENST00000330687 KSR2Q6VAB6 950 aa23.38■■□□□ 1.33
CMTM4-201ENST00000330687 HNRNPLLQ8WVV9 542 aaKnown RBP23.38■■□□□ 1.33
CMTM4-201ENST00000330687 USP8P40818 1118 aa23.38■■□□□ 1.33
CMTM4-201ENST00000330687 PIP4K2BP78356 416 aa23.38■■□□□ 1.33
CMTM4-201ENST00000330687 PATL2C9JE40 543 aaKnown RBP23.37■■□□□ 1.33
CMTM4-201ENST00000330687 PPP2R5AQ15172 486 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 USPL1Q5W0Q7 1092 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 KAZALD1Q96I82 304 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 MYL10Q9BUA6 226 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 MYO6Q9UM54 1294 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 ATP5J2-PTCD1G3V325 749 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 PTCD1O75127 700 aaKnown RBP23.37■■□□□ 1.33
CMTM4-201ENST00000330687 PDE6BP35913 854 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 KIF23Q02241 960 aaPredicted RBP23.37■■□□□ 1.33
CMTM4-201ENST00000330687 TNNI3KQ59H18 835 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 SERTAD1Q9UHV2 236 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 FPGT-TNNI3KV9GXZ4 949 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 NEXNQ0ZGT2 675 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 TRIM29Q14134 588 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 KCTD16Q68DU8 428 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 CD248Q9HCU0 757 aa23.37■■□□□ 1.33
CMTM4-201ENST00000330687 UBE2Q2LH0YL09 131 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 NDUFAB1O14561 156 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 SCP2P22307 547 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 SLC39A14Q15043 492 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 SLC9C2Q5TAH2 1124 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 ATP2C2O75185 946 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
CMTM4-201ENST00000330687 UBE3BQ7Z3V4 1068 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 OTUD6BQ8N6M0 293 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 VPS16Q9H269 839 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 MAN1B1Q9UKM7 699 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 RIMS1Q86UR5 1692 aaKnown RBP23.36■■□□□ 1.33
CMTM4-201ENST00000330687 SYF2O95926 243 aaKnown RBP23.36■■□□□ 1.33
CMTM4-201ENST00000330687 HSPD1P10809 573 aaKnown RBP23.36■■□□□ 1.33
CMTM4-201ENST00000330687 NFXL1Q6ZNB6 911 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 BRAPQ7Z569 592 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 NUTM2AQ8IVF1 878 aaPredicted RBP23.36■■□□□ 1.33
CMTM4-201ENST00000330687 RUFY1Q96T51 708 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 PSMB7Q99436 277 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 RAB21Q9UL25 225 aa23.36■■□□□ 1.33
CMTM4-201ENST00000330687 MSANTD4Q8NCY6 345 aa23.35■■□□□ 1.33
CMTM4-201ENST00000330687 MAP9Q49MG5 647 aa23.35■■□□□ 1.33
CMTM4-201ENST00000330687 TTC39AQ5SRH9 613 aa23.35■■□□□ 1.33
CMTM4-201ENST00000330687 METP08581 1390 aa23.35■■□□□ 1.33
CMTM4-201ENST00000330687 GRIN1Q05586 938 aa23.34■■□□□ 1.33
CMTM4-201ENST00000330687 SLC24A3Q9HC58 644 aa23.34■■□□□ 1.33
CMTM4-201ENST00000330687 TUBE1Q9UJT0 475 aa23.34■■□□□ 1.33
CMTM4-201ENST00000330687 GOLGA6BA6NDN3 693 aa23.34■■□□□ 1.33
CMTM4-201ENST00000330687 ACTN3Q08043 901 aaPredicted RBP23.34■■□□□ 1.33
CMTM4-201ENST00000330687 CAPS2Q9BXY5 557 aa23.34■■□□□ 1.33
CMTM4-201ENST00000330687 ABCA9Q8IUA7 1624 aa23.34■■□□□ 1.33
CMTM4-201ENST00000330687 POSTNQ15063 836 aa23.34■■□□□ 1.33
CMTM4-201ENST00000330687 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
CMTM4-201ENST00000330687 SND1Q7KZF4 910 aaKnown RBP eCLIP23.34■■□□□ 1.33
CMTM4-201ENST00000330687 IRAK1P51617 712 aa23.33■■□□□ 1.33
CMTM4-201ENST00000330687 FILIP1LQ4L180 1135 aa23.33■■□□□ 1.33
CMTM4-201ENST00000330687 KIRREL3Q8IZU9 778 aa23.33■■□□□ 1.33
CMTM4-201ENST00000330687 USP5P45974 858 aa23.33■■□□□ 1.33
CMTM4-201ENST00000330687 PDCLQ13371 301 aa23.33■■□□□ 1.33
CMTM4-201ENST00000330687 KRT40Q6A162 431 aa23.33■■□□□ 1.33
CMTM4-201ENST00000330687 SUGP1Q8IWZ8 645 aaKnown RBP23.33■■□□□ 1.33
CMTM4-201ENST00000330687 FLT4P35916 1363 aa23.33■■□□□ 1.32
CMTM4-201ENST00000330687 N4BP3O15049 544 aa23.33■■□□□ 1.32
CMTM4-201ENST00000330687 JADE2Q9NQC1 790 aa23.33■■□□□ 1.32
CMTM4-201ENST00000330687 HPCAL4Q9UM19 191 aa23.33■■□□□ 1.32
CMTM4-201ENST00000330687 RPS6KA5O75582 802 aa23.32■■□□□ 1.32
CMTM4-201ENST00000330687 DDX58O95786 925 aaKnown RBP23.32■■□□□ 1.32
CMTM4-201ENST00000330687 ATP5JP18859 108 aa23.32■■□□□ 1.32
CMTM4-201ENST00000330687 FXR1P51114 621 aaKnown RBP eCLIP23.32■■□□□ 1.32
CMTM4-201ENST00000330687 SF3A3Q12874 501 aaKnown RBP eCLIP23.32■■□□□ 1.32
CMTM4-201ENST00000330687 TBX2Q13207 712 aaPredicted RBP23.32■■□□□ 1.32
CMTM4-201ENST00000330687 LINS1Q8NG48 757 aa23.32■■□□□ 1.32
CMTM4-201ENST00000330687 ZNF274Q96GC6 653 aaPredicted RBP23.32■■□□□ 1.32
CMTM4-201ENST00000330687 MAPK8IP1Q9UQF2 711 aa23.32■■□□□ 1.32
CMTM4-201ENST00000330687 DNA2P51530 1060 aa23.32■■□□□ 1.32
CMTM4-201ENST00000330687 EXOSC10Q01780 885 aaKnown RBP23.32■■□□□ 1.32
CMTM4-201ENST00000330687 KCNV1Q6PIU1 500 aa23.32■■□□□ 1.32
CMTM4-201ENST00000330687 CPLX2Q6PUV4 134 aaKnown RBP23.32■■□□□ 1.32
CMTM4-201ENST00000330687 CEP89Q96ST8 783 aa23.32■■□□□ 1.32
CMTM4-201ENST00000330687 MMS19Q96T76 1030 aa23.32■■□□□ 1.32
CMTM4-201ENST00000330687 PREX1Q8TCU6 1659 aa23.32■■□□□ 1.32
CMTM4-201ENST00000330687 LMTK2Q8IWU2 1503 aa23.32■■□□□ 1.32
CMTM4-201ENST00000330687 PAG1Q9NWQ8 432 aa23.31■■□□□ 1.32
CMTM4-201ENST00000330687 TUBGCP6Q96RT7 1819 aa23.31■■□□□ 1.32
CMTM4-201ENST00000330687 RPAINQ86UA6 219 aa23.31■■□□□ 1.32
CMTM4-201ENST00000330687 CCDC85AQ96PX6 553 aaPredicted RBP23.31■■□□□ 1.32
CMTM4-201ENST00000330687 ANKRD18AQ8IVF6 992 aa23.3■■□□□ 1.32
CMTM4-201ENST00000330687 KBTBD3Q8NAB2 608 aa23.3■■□□□ 1.32
CMTM4-201ENST00000330687 CTCFLQ8NI51 663 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms