RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 STRCP1A6NGW2 1772 aa9.53□□□□□ -0.88
SKA2-201ENST00000330137 ANKRD33BA6NCL7 494 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 GOLGA6CA6NDK9 693 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 GOLIM4O00461 696 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 GOLGA6DP0CG33 693 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 KCNA6P17658 529 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 CCT5P48643 541 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 SLC8A3P57103 927 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 STK3Q13188 491 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 SAFB2Q14151 953 aaKnown RBP eCLIP9.52□□□□□ -0.88
SKA2-201ENST00000330137 NBPF14Q5TI25 921 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 ZNF662Q6ZS27 426 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 DHX32Q7L7V1 743 aaKnown RBP9.52□□□□□ -0.88
SKA2-201ENST00000330137 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.88
SKA2-201ENST00000330137 FAM177A1Q8N128 213 aaPredicted RBP9.52□□□□□ -0.88
SKA2-201ENST00000330137 MLKLQ8NB16 471 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 DPF2Q92785 391 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 FAXDC2Q96IV6 333 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 CRACR2AQ9BSW2 395 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 GOLGA6AQ9NYA3 693 aa9.52□□□□□ -0.88
SKA2-201ENST00000330137 SEMA3EO15041 775 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 CEBPZQ03701 1054 aaKnown RBP9.52□□□□□ -0.89
SKA2-201ENST00000330137 CKAP4Q07065 602 aaKnown RBP9.52□□□□□ -0.89
SKA2-201ENST00000330137 PLEKHO1Q53GL0 409 aaPredicted RBP9.52□□□□□ -0.89
SKA2-201ENST00000330137 OTUD6BQ8N6M0 293 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 C1orf131Q8NDD1 294 aaKnown RBP9.52□□□□□ -0.89
SKA2-201ENST00000330137 BCAS4Q8TDM0 211 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 ZKSCAN4Q969J2 545 aaPredicted RBP9.52□□□□□ -0.89
SKA2-201ENST00000330137 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.52□□□□□ -0.89
SKA2-201ENST00000330137 BATF3Q9NR55 127 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 INTS13Q9NVM9 706 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 ITIH6Q6UXX5 1313 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 TOM1O60784 492 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 AMPD2Q01433 879 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 IFFO1Q0D2I5 559 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 NR1I3Q14994 352 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 NT5DC1Q5TFE4 455 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 IQCEQ6IPM2 695 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 FAM227BQ96M60 508 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 JPH2Q9BR39 696 aaPredicted RBP9.52□□□□□ -0.89
SKA2-201ENST00000330137 ACTR5Q9H9F9 607 aaPredicted RBP9.52□□□□□ -0.89
SKA2-201ENST00000330137 MRPL44Q9H9J2 332 aaKnown RBP9.52□□□□□ -0.89
SKA2-201ENST00000330137 PUF60Q9UHX1 559 aaKnown RBP9.52□□□□□ -0.89
SKA2-201ENST00000330137 TBX22Q9Y458 520 aa9.52□□□□□ -0.89
SKA2-201ENST00000330137 CARMIL3Q8ND23 1372 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 CTDNEP1O95476 244 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 PFKFB1P16118 471 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 SSR1P43307 286 aaKnown RBP9.51□□□□□ -0.89
SKA2-201ENST00000330137 APBA1Q02410 837 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 OS9Q13438 667 aaPredicted RBP9.51□□□□□ -0.89
SKA2-201ENST00000330137 FBXW10Q5XX13 1052 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 TMTC1Q8IUR5 882 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 CNGA4Q8IV77 575 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 CTAGE1Q96RT6 745 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 KAT14Q9H8E8 782 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 MYO6Q9UM54 1294 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 USP31Q70CQ4 1352 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 A0A1B0GTH6 734 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 H0YHG0 523 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 RASSF9O75901 435 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 ERCC5P28715 1186 aaPredicted RBP9.51□□□□□ -0.89
SKA2-201ENST00000330137 SLC8A1P32418 973 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 SYKP43405 635 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 ITIH3Q06033 890 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 SLC39A14Q15043 492 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 ALS2CLQ60I27 953 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 EP400NLQ6ZTU2 488 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 NME9Q86XW9 330 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 FMNL2Q96PY5 1086 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 TRIM6Q9C030 488 aaPredicted RBP9.51□□□□□ -0.89
SKA2-201ENST00000330137 STK26Q9P289 416 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 ODF2LQ9ULJ1 636 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 AMOTL2Q9Y2J4 779 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 CAPN7Q9Y6W3 813 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 GRIN2DO15399 1336 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 WDR17Q8IZU2 1322 aa9.51□□□□□ -0.89
SKA2-201ENST00000330137 FMN2Q9NZ56 1722 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 A0A0D9SFI3 127 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 TULP1O00294 542 aaPredicted RBP9.5□□□□□ -0.89
SKA2-201ENST00000330137 EXOSC10Q01780 885 aaKnown RBP9.5□□□□□ -0.89
SKA2-201ENST00000330137 SLMAPQ14BN4 828 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 ZNF569Q5MCW4 686 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 BEND3Q5T5X7 828 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 MYSM1Q5VVJ2 828 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 RCSD1Q6JBY9 416 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 SYNE3Q6ZMZ3 975 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 CLIC6Q96NY7 704 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 VCPKMTQ9H867 229 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 FANCLQ9NW38 375 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 PATL2C9JE40 543 aaKnown RBP9.5□□□□□ -0.89
SKA2-201ENST00000330137 TMEM232C9JQI7 657 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 SARNPP82979 210 aaKnown RBP9.5□□□□□ -0.89
SKA2-201ENST00000330137 TRIM14Q14142 442 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 ANO1Q5XXA6 986 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 CCDC70Q6NSX1 233 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 IQCA1Q86XH1 822 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 P3H4Q92791 437 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 FSD1Q9BTV5 496 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 SUGCTQ9HAC7 445 aa9.5□□□□□ -0.89
SKA2-201ENST00000330137 ATP6V0A4Q9HBG4 840 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms