RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 C6orf229H3BNL8 230 aa17.49■□□□□ 0.39
TPM3-205ENST00000328159 METAP2P50579 478 aaKnown RBP eCLIP17.49■□□□□ 0.39
TPM3-205ENST00000328159 FOSBP53539 338 aa17.49■□□□□ 0.39
TPM3-205ENST00000328159 UBE2HP62256 183 aa17.49■□□□□ 0.39
TPM3-205ENST00000328159 FAM173BQ6P4H8 233 aa17.49■□□□□ 0.39
TPM3-205ENST00000328159 CTR9Q6PD62 1173 aa17.49■□□□□ 0.39
TPM3-205ENST00000328159 ATP8A2Q9NTI2 1148 aa17.49■□□□□ 0.39
TPM3-205ENST00000328159 ZBTB43O43298 467 aa17.48■□□□□ 0.39
TPM3-205ENST00000328159 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
TPM3-205ENST00000328159 MRE11P49959 708 aa17.48■□□□□ 0.39
TPM3-205ENST00000328159 SART3Q15020 963 aaKnown RBP17.48■□□□□ 0.39
TPM3-205ENST00000328159 DCP1AQ9NPI6 582 aaPredicted RBP17.48■□□□□ 0.39
TPM3-205ENST00000328159 MYH2Q9UKX2 1941 aa17.48■□□□□ 0.39
TPM3-205ENST00000328159 CYP2D7A0A087X1C5 515 aa17.48■□□□□ 0.39
TPM3-205ENST00000328159 CCDC69A6NI79 296 aa17.48■□□□□ 0.39
TPM3-205ENST00000328159 USP17L12C9JPN9 530 aa17.48■□□□□ 0.39
TPM3-205ENST00000328159 USP17L21D6R901 530 aa17.48■□□□□ 0.39
TPM3-205ENST00000328159 PCP11498 1178 aaKnown RBP17.48■□□□□ 0.39
TPM3-205ENST00000328159 ALDH1B1P30837 517 aa17.48■□□□□ 0.39
TPM3-205ENST00000328159 GRIK5Q16478 980 aa17.48■□□□□ 0.39
TPM3-205ENST00000328159 ESR2Q92731 530 aa17.48■□□□□ 0.39
TPM3-205ENST00000328159 SYAP1Q96A49 352 aaPredicted RBP17.48■□□□□ 0.39
TPM3-205ENST00000328159 ORC3Q9UBD5 711 aaPredicted RBP17.48■□□□□ 0.39
TPM3-205ENST00000328159 ERICH2A1L162 156 aa17.47■□□□□ 0.39
TPM3-205ENST00000328159 SMIM22K7EJ46 135 aa17.47■□□□□ 0.39
TPM3-205ENST00000328159 LDHCP07864 332 aa17.47■□□□□ 0.39
TPM3-205ENST00000328159 WTAPQ15007 396 aa17.47■□□□□ 0.39
TPM3-205ENST00000328159 EZH2Q15910 746 aaKnown RBP17.47■□□□□ 0.39
TPM3-205ENST00000328159 MICU3Q86XE3 530 aa17.47■□□□□ 0.39
TPM3-205ENST00000328159 MASTLQ96GX5 879 aa17.47■□□□□ 0.39
TPM3-205ENST00000328159 CAMKK2Q96RR4 588 aa17.47■□□□□ 0.39
TPM3-205ENST00000328159 GRPEL1Q9HAV7 217 aa17.47■□□□□ 0.39
TPM3-205ENST00000328159 SLC12A7Q9Y666 1083 aa17.47■□□□□ 0.39
TPM3-205ENST00000328159 ELP1O95163 1332 aa17.47■□□□□ 0.39
TPM3-205ENST00000328159 GOLGA8AA7E2F4 631 aa17.46■□□□□ 0.39
TPM3-205ENST00000328159 CDKL5O76039 1030 aa17.46■□□□□ 0.39
TPM3-205ENST00000328159 FGRP09769 529 aa17.46■□□□□ 0.39
TPM3-205ENST00000328159 XRCC6P12956 609 aaKnown RBP eCLIP17.46■□□□□ 0.399e-13■□□□□ 8.6
TPM3-205ENST00000328159 RXRAP19793 462 aa17.46■□□□□ 0.39
TPM3-205ENST00000328159 EN1Q05925 392 aaPredicted RBP17.46■□□□□ 0.39
TPM3-205ENST00000328159 SLC15A2Q16348 729 aa17.46■□□□□ 0.39
TPM3-205ENST00000328159 QSER1Q2KHR3 1735 aa17.46■□□□□ 0.39
TPM3-205ENST00000328159 SBK1Q52WX2 424 aa17.46■□□□□ 0.39
TPM3-205ENST00000328159 CPLX2Q6PUV4 134 aaKnown RBP17.46■□□□□ 0.39
TPM3-205ENST00000328159 SYNE3Q6ZMZ3 975 aa17.46■□□□□ 0.39
TPM3-205ENST00000328159 TTC6Q86TZ1 520 aa17.46■□□□□ 0.39
TPM3-205ENST00000328159 TMTC2Q8N394 836 aa17.46■□□□□ 0.39
TPM3-205ENST00000328159 ZKSCAN3Q9BRR0 538 aa17.46■□□□□ 0.39
TPM3-205ENST00000328159 SCAND2PQ9GZW5 306 aaPredicted RBP17.46■□□□□ 0.39
TPM3-205ENST00000328159 ANO8Q9HCE9 1232 aaPredicted RBP17.46■□□□□ 0.39
TPM3-205ENST00000328159 CDC27P30260 824 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 ADD1P35611 737 aaKnown RBP17.45■□□□□ 0.38
TPM3-205ENST00000328159 DIXDC1Q155Q3 683 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 MPNDQ8N594 471 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 UBAC1Q9BSL1 405 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 STK32BQ9NY57 414 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 ARPP21Q9UBL0 812 aaPredicted RBP17.45■□□□□ 0.38
TPM3-205ENST00000328159 NID2Q14112 1375 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 BAG3O95817 575 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 PPP4CP60510 307 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 GUCY1B3Q02153 619 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 CCDC144CPQ8IYA2 1237 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 C8orf76Q96K31 380 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 NOL10Q9BSC4 688 aaKnown RBP17.45■□□□□ 0.38
TPM3-205ENST00000328159 MYL10Q9BUA6 226 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 TFIP11Q9UBB9 837 aaKnown RBP17.45■□□□□ 0.38
TPM3-205ENST00000328159 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.45■□□□□ 0.38
TPM3-205ENST00000328159 MROH7-TTC4A0A0A0MT08 1334 aa17.45■□□□□ 0.38
TPM3-205ENST00000328159 ECM29Q5VYK3 1845 aa17.44■□□□□ 0.38
TPM3-205ENST00000328159 SH3RF3Q8TEJ3 882 aaPredicted RBP17.44■□□□□ 0.38
TPM3-205ENST00000328159 TBC1D22AQ8WUA7 517 aa17.44■□□□□ 0.38
TPM3-205ENST00000328159 SPATA32Q96LK8 384 aa17.44■□□□□ 0.38
TPM3-205ENST00000328159 FAM217BQ9NTX9 383 aaPredicted RBP17.44■□□□□ 0.38
TPM3-205ENST00000328159 FAM205AQ6ZU69 1335 aa17.44■□□□□ 0.38
TPM3-205ENST00000328159 DLEC1Q9Y238 1755 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 RIMBP2O15034 1052 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 ORC4O43929 436 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 SLC3A2P08195 630 aaKnown RBP17.43■□□□□ 0.38
TPM3-205ENST00000328159 SEC23AQ15436 765 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 NTRK3Q16288 839 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 C2CD5Q86YS7 1000 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 RGS22Q8NE09 1264 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 LEO1Q8WVC0 666 aaPredicted RBP17.43■□□□□ 0.38
TPM3-205ENST00000328159 COA1Q9GZY4 146 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 TMX4Q9H1E5 349 aaPredicted RBP17.43■□□□□ 0.38
TPM3-205ENST00000328159 NAV1Q8NEY1 1877 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 CDK5RAP2Q96SN8 1893 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 SYCE3A1L190 88 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 RANBP6O60518 1105 aaKnown RBP17.43■□□□□ 0.38
TPM3-205ENST00000328159 CYP2D6P10635 497 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 USP5P45974 858 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 RCAN1P53805 252 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 TPRNQ4KMQ1 711 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 MFSD14BQ5SR56 506 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 OLFM4Q6UX06 510 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 DPP8Q6V1X1 898 aaPredicted RBP17.43■□□□□ 0.38
TPM3-205ENST00000328159 FBXO18Q8NFZ0 1043 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 ZSCAN10Q96SZ4 725 aaPredicted RBP17.43■□□□□ 0.38
TPM3-205ENST00000328159 RTFDC1Q9BY42 306 aaPredicted RBP17.43■□□□□ 0.38
TPM3-205ENST00000328159 MCM9Q9NXL9 1143 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms