RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TEX11Q8IYF3 940 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 RAD50Q92878 1312 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 SMARCC2Q8TAQ2 1214 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 VPS37BQ9H9H4 285 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 VEZTQ9HBM0 779 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 C6orf229H3BNL8 230 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 IQUBQ8NA54 791 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 INTS4Q96HW7 963 aaKnown RBP18.34■□□□□ 0.53
SMAD3-201ENST00000327367 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.34■□□□□ 0.53
SMAD3-201ENST00000327367 PIK3R4Q99570 1358 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 CADPSQ9ULU8 1353 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 F8W031 263 aaPredicted RBP18.34■□□□□ 0.53
SMAD3-201ENST00000327367 TUBB2AQ13885 445 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 BRAPQ7Z569 592 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 CCDC105Q8IYK2 499 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 MIGA1Q8NAN2 632 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 TUBB2BQ9BVA1 445 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 ZNF652Q9Y2D9 606 aa18.34■□□□□ 0.53
SMAD3-201ENST00000327367 CHMLP26374 656 aa18.33■□□□□ 0.53
SMAD3-201ENST00000327367 POLE2P56282 527 aa18.33■□□□□ 0.53
SMAD3-201ENST00000327367 MRPL50Q8N5N7 158 aaKnown RBP18.33■□□□□ 0.53
SMAD3-201ENST00000327367 KIFC2Q96AC6 838 aa18.33■□□□□ 0.53
SMAD3-201ENST00000327367 XPO4Q9C0E2 1151 aaKnown RBP18.33■□□□□ 0.53
SMAD3-201ENST00000327367 RGS16O15492 202 aaPredicted RBP18.33■□□□□ 0.53
SMAD3-201ENST00000327367 MAN1A1P33908 653 aa18.33■□□□□ 0.53
SMAD3-201ENST00000327367 NLRP12P59046 1061 aa18.33■□□□□ 0.53
SMAD3-201ENST00000327367 TYW1BQ6NUM6 668 aa18.33■□□□□ 0.53
SMAD3-201ENST00000327367 PAG1Q9NWQ8 432 aa18.33■□□□□ 0.53
SMAD3-201ENST00000327367 POLKQ9UBT6 870 aa18.33■□□□□ 0.53
SMAD3-201ENST00000327367 A6NNZ2 444 aa18.33■□□□□ 0.52
SMAD3-201ENST00000327367 TUBB8Q3ZCM7 444 aa18.33■□□□□ 0.52
SMAD3-201ENST00000327367 SLC24A3Q9HC58 644 aa18.33■□□□□ 0.52
SMAD3-201ENST00000327367 KCNH3Q9ULD8 1083 aa18.33■□□□□ 0.52
SMAD3-201ENST00000327367 SLC8A1P32418 973 aa18.33■□□□□ 0.52
SMAD3-201ENST00000327367 TMEM87AQ8NBN3 555 aa18.33■□□□□ 0.52
SMAD3-201ENST00000327367 CNNM2Q9H8M5 875 aa18.33■□□□□ 0.52
SMAD3-201ENST00000327367 PLCB1Q9NQ66 1216 aa18.33■□□□□ 0.52
SMAD3-201ENST00000327367 PKD2L1Q9P0L9 805 aa18.33■□□□□ 0.52
SMAD3-201ENST00000327367 RASSF2P50749 326 aa18.33■□□□□ 0.52
SMAD3-201ENST00000327367 IFT88Q13099 833 aa18.33■□□□□ 0.52
SMAD3-201ENST00000327367 TBC1D7Q9P0N9 293 aa18.32■□□□□ 0.52
SMAD3-201ENST00000327367 IMPACTQ9P2X3 320 aa18.32■□□□□ 0.52
SMAD3-201ENST00000327367 IGF1RP08069 1367 aa18.32■□□□□ 0.52
SMAD3-201ENST00000327367 PPFIA4O75335 1185 aa18.32■□□□□ 0.52
SMAD3-201ENST00000327367 TTLL12Q14166 644 aaPredicted RBP18.32■□□□□ 0.52
SMAD3-201ENST00000327367 ATP2B3Q16720 1220 aa18.32■□□□□ 0.52
SMAD3-201ENST00000327367 N4BP2L2Q92802 583 aaPredicted RBP18.32■□□□□ 0.52
SMAD3-201ENST00000327367 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.32■□□□□ 0.52
SMAD3-201ENST00000327367 HARSP12081 509 aaKnown RBP18.32■□□□□ 0.52
SMAD3-201ENST00000327367 CSGALNACT2Q8N6G5 542 aa18.32■□□□□ 0.52
SMAD3-201ENST00000327367 C8orf58Q8NAV2 365 aa18.32■□□□□ 0.52
SMAD3-201ENST00000327367 UBL4BQ8N7F7 174 aa18.32■□□□□ 0.52
SMAD3-201ENST00000327367 TRIM6Q9C030 488 aaPredicted RBP18.32■□□□□ 0.52
SMAD3-201ENST00000327367 SP4Q02446 784 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 CFAP221Q4G0U5 840 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 RASEFQ8IZ41 740 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 STAMQ92783 540 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 MYO1AQ9UBC5 1043 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 ARHGAP6O43182 974 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 RNF40O75150 1001 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 BAG3O95817 575 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 GOLGA8KD6RF30 607 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 TRIM14Q14142 442 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 HS2ST1Q7LGA3 356 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 ADAT2Q7Z6V5 191 aaKnown RBP18.31■□□□□ 0.52
SMAD3-201ENST00000327367 C6orf50Q9HD87 102 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 PPP1R9AQ9ULJ8 1098 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 TRIM35Q9UPQ4 493 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 CDC37L1Q7L3B6 337 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 CFAP61Q8NHU2 1237 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 OTUD7AQ8TE49 926 aaPredicted RBP18.31■□□□□ 0.52
SMAD3-201ENST00000327367 PYCARDQ9ULZ3 195 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 ATP8B2P98198 1209 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 PNOCQ13519 176 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 KLHL14Q9P2G3 628 aa18.31■□□□□ 0.52
SMAD3-201ENST00000327367 SERPINB6P35237 376 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 FAM69CQ0P6D2 419 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 LETM2Q2VYF4 491 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 SV2BQ7L1I2 683 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 CCDC13Q8IYE1 715 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 TMTC2Q8N394 836 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 BLZF1Q9H2G9 400 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 EPB41P11171 864 aaKnown RBP18.3■□□□□ 0.52
SMAD3-201ENST00000327367 MAGEA1P43355 309 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 BRD3Q15059 726 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 DPH5Q9H2P9 285 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 PAK1Q13153 545 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 ANO1Q5XXA6 986 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 PHLDB3Q6NSJ2 640 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 ZNF202O95125 648 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 STMN1P16949 149 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 CASC4Q6P4E1 433 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 SIRT1Q96EB6 747 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 CTTNBP2NLQ9P2B4 639 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 BUB1O43683 1085 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 EFCC1Q9HA90 598 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 NFE2L3Q9Y4A8 694 aa18.3■□□□□ 0.52
SMAD3-201ENST00000327367 PDE6BP35913 854 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 LONRF2Q1L5Z9 754 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 DHX32Q7L7V1 743 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms