RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CA8P35219 290 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 ATP2B3Q16720 1220 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 NAA16Q6N069 864 aaPredicted RBP18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 TMTC1Q8IUR5 882 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 FAN1Q9Y2M0 1017 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 SLC9C1Q4G0N8 1177 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 ZNF804AQ7Z570 1209 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 TRAF5O00463 557 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 PHLDB3Q6NSJ2 640 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 PRPF31Q8WWY3 499 aaKnown RBP18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 STK24Q9Y6E0 443 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 ATP5J2-PTCD1G3V325 749 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 IL15P40933 162 aaPredicted RBP18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 PSMD6Q15008 389 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 ZNF75DP51815 510 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 LLPHQ9BRT6 129 aaKnown RBP18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 TBC1D8BQ0IIM8 1120 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 SLC9C2Q5TAH2 1124 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 CCDC89Q8N998 374 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 CHPF2Q9P2E5 772 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 NME9Q86XW9 330 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 CCDC117Q8IWD4 279 aaPredicted RBP18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 FLOT1O75955 427 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 ZSCAN26Q16670 478 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 LRCH2Q5VUJ6 765 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 PPP4R1Q8TF05 950 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 A0A1B0GVL5 298 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 ASIC3Q9UHC3 531 aa18.78■□□□□ 0.6
SMCHD1-201ENST00000320876 ANKRD20A3Q5VUR7 823 aa18.77■□□□□ 0.6
SMCHD1-201ENST00000320876 MIER3Q7Z3K6 550 aa18.77■□□□□ 0.6
SMCHD1-201ENST00000320876 RBSNQ9H1K0 784 aa18.77■□□□□ 0.6
SMCHD1-201ENST00000320876 COG7P83436 770 aa18.77■□□□□ 0.6
SMCHD1-201ENST00000320876 APOBRQ0VD83 1088 aa18.77■□□□□ 0.6
SMCHD1-201ENST00000320876 MICAL1Q8TDZ2 1067 aa18.77■□□□□ 0.6
SMCHD1-201ENST00000320876 P3H4Q92791 437 aa18.77■□□□□ 0.6
SMCHD1-201ENST00000320876 HIP1RO75146 1068 aa18.77■□□□□ 0.59
SMCHD1-201ENST00000320876 BRD3Q15059 726 aa18.77■□□□□ 0.59
SMCHD1-201ENST00000320876 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 NCAPGQ9BPX3 1015 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 THEGQ9P2T0 379 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 TNNI2P48788 182 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 PAK1Q13153 545 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 TRIM68Q6AZZ1 485 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 TRIM4Q9C037 500 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 IFT140Q96RY7 1462 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 TNFAIP3P21580 790 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 CACYBPQ9HB71 228 aaKnown RBP18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 DDX21Q9NR30 783 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 OPHN1O60890 802 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 RNF40O75150 1001 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 MEIS3Q99687 375 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 STK38LQ9Y2H1 464 aa18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 SOS1Q07889 1333 aaPredicted RBP18.76■□□□□ 0.59
SMCHD1-201ENST00000320876 RNF113AO15541 343 aaKnown RBP18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 RILPQ96NA2 401 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 TBC1D8O95759 1140 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 FCHSD1Q86WN1 690 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 FNBP1Q96RU3 617 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 NUCKS1Q9H1E3 243 aaKnown RBP18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 KCNH3Q9ULD8 1083 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 PCDHB15Q9Y5E8 787 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 CFAP43Q8NDM7 1665 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 KRT15P19012 456 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 CUL4BQ13620 913 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 HAUS3Q68CZ6 603 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 RSPH3Q86UC2 560 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 WHAMMQ8TF30 809 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 HAUS8Q9BT25 410 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 KLHL14Q9P2G3 628 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 PRXQ9BXM0 1461 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 CCNT1O60563 726 aaKnown RBP18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 PPP2R5EQ16537 467 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 NBPF5PQ86XG9 351 aaPredicted RBP18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 DISP3Q9P2K9 1392 aa18.75■□□□□ 0.59
SMCHD1-201ENST00000320876 AP1ARQ63HQ0 302 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 TROVE2P10155 538 aaKnown RBP eCLIP18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 KRT9P35527 623 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 FANCCQ00597 558 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 RGS16O15492 202 aaPredicted RBP18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 CLSTN2Q9H4D0 955 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 MED4Q9NPJ6 270 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 BAIAP2L1Q9UHR4 511 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 ATP6V1AP38606 617 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 ATP8B2P98198 1209 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 CAPN7Q9Y6W3 813 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 GOLGA8KD6RF30 607 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 ZMYM4Q5VZL5 1548 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 WASLO00401 505 aaPredicted RBP18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 ALDH1L1O75891 902 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 PHBP35232 272 aa18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 RNASE9P60153 205 aaKnown RBP18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 LARSQ9P2J5 1176 aaKnown RBP18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 DDX41Q9UJV9 622 aaKnown RBP18.74■□□□□ 0.59
SMCHD1-201ENST00000320876 BCRP11274 1271 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 AKNAD1Q5T1N1 836 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 IFNL2Q8IZJ0 200 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 CARD6Q9BX69 1037 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms