RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 KIF4BQ2VIQ3 1234 aa16.21■□□□□ 0.19
PRPF18-201ENST00000320054 TSGA10IPQ3SY00 556 aa16.21■□□□□ 0.19
PRPF18-201ENST00000320054 TMOD2Q9NZR1 351 aa16.21■□□□□ 0.19
PRPF18-201ENST00000320054 ARPP21Q9UBL0 812 aaPredicted RBP16.21■□□□□ 0.19
PRPF18-201ENST00000320054 ZNF70Q9UC06 446 aaPredicted RBP16.21■□□□□ 0.19
PRPF18-201ENST00000320054 SIPA1L1O43166 1804 aa16.2■□□□□ 0.18
PRPF18-201ENST00000320054 ENTPD3O75355 529 aa16.2■□□□□ 0.18
PRPF18-201ENST00000320054 CYP21A2P08686 494 aa16.2■□□□□ 0.18
PRPF18-201ENST00000320054 ZKSCAN1P17029 563 aaPredicted RBP16.2■□□□□ 0.18
PRPF18-201ENST00000320054 EPS15P42566 896 aa16.2■□□□□ 0.18
PRPF18-201ENST00000320054 SAMD7Q7Z3H4 446 aa16.2■□□□□ 0.18
PRPF18-201ENST00000320054 MAPKAPK5Q8IW41 473 aa16.2■□□□□ 0.18
PRPF18-201ENST00000320054 ADARB2Q9NS39 739 aaKnown RBP16.2■□□□□ 0.18
PRPF18-201ENST00000320054 ANAPC4Q9UJX5 808 aa16.2■□□□□ 0.18
PRPF18-201ENST00000320054 UTRNP46939 3433 aa16.19■□□□□ 0.18
PRPF18-201ENST00000320054 ZNF213O14771 459 aa16.19■□□□□ 0.18
PRPF18-201ENST00000320054 EGFRP00533 1210 aa16.19■□□□□ 0.18
PRPF18-201ENST00000320054 NBPF9Q3BBW0 867 aa16.19■□□□□ 0.18
PRPF18-201ENST00000320054 TBC1D10BQ4KMP7 808 aaPredicted RBP16.19■□□□□ 0.18
PRPF18-201ENST00000320054 CTR9Q6PD62 1173 aa16.19■□□□□ 0.18
PRPF18-201ENST00000320054 DDX4Q9NQI0 724 aaKnown RBP16.19■□□□□ 0.18
PRPF18-201ENST00000320054 MCM9Q9NXL9 1143 aa16.19■□□□□ 0.18
PRPF18-201ENST00000320054 FAM198AQ9UFP1 575 aa16.19■□□□□ 0.18
PRPF18-201ENST00000320054 PALD1Q9ULE6 856 aa16.19■□□□□ 0.18
PRPF18-201ENST00000320054 SNX14Q9Y5W7 946 aa16.19■□□□□ 0.18
PRPF18-201ENST00000320054 USP17L12C9JPN9 530 aa16.18■□□□□ 0.18
PRPF18-201ENST00000320054 USP17L21D6R901 530 aa16.18■□□□□ 0.18
PRPF18-201ENST00000320054 NFIAQ12857 509 aa16.18■□□□□ 0.18
PRPF18-201ENST00000320054 KRT32Q14532 448 aa16.18■□□□□ 0.18
PRPF18-201ENST00000320054 RBM26Q5T8P6 1007 aaKnown RBP16.18■□□□□ 0.18
PRPF18-201ENST00000320054 FAM83AQ86UY5 434 aa16.18■□□□□ 0.18
PRPF18-201ENST00000320054 AMOTL1Q8IY63 956 aa16.18■□□□□ 0.18
PRPF18-201ENST00000320054 RASEFQ8IZ41 740 aa16.18■□□□□ 0.18
PRPF18-201ENST00000320054 OSBPL5Q9H0X9 879 aaPredicted RBP16.18■□□□□ 0.18
PRPF18-201ENST00000320054 HACL1Q9UJ83 578 aa16.18■□□□□ 0.18
PRPF18-201ENST00000320054 ATRNL1Q5VV63 1379 aa16.17■□□□□ 0.18
PRPF18-201ENST00000320054 ROBO3Q96MS0 1386 aa16.17■□□□□ 0.18
PRPF18-201ENST00000320054 IQCA1LA6NCM1 817 aa16.17■□□□□ 0.18
PRPF18-201ENST00000320054 PPARAQ07869 468 aa16.17■□□□□ 0.18
PRPF18-201ENST00000320054 PICALMQ13492 652 aa16.17■□□□□ 0.18
PRPF18-201ENST00000320054 C12orf60Q5U649 245 aa16.17■□□□□ 0.18
PRPF18-201ENST00000320054 TRPM4Q8TD43 1214 aa16.17■□□□□ 0.18
PRPF18-201ENST00000320054 DHX36Q9H2U1 1008 aaKnown RBP16.17■□□□□ 0.18
PRPF18-201ENST00000320054 TSHZ2Q9NRE2 1034 aa16.17■□□□□ 0.18
PRPF18-201ENST00000320054 TAOK2Q9UL54 1235 aa16.17■□□□□ 0.18
PRPF18-201ENST00000320054 CLRN2A0PK11 232 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 MINDY4BA8MYZ0 360 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 PCP11498 1178 aaKnown RBP16.16■□□□□ 0.18
PRPF18-201ENST00000320054 TNNI2P48788 182 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 CACNB3P54284 484 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 HAND2P61296 217 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 USP50Q70EL3 339 aaPredicted RBP16.16■□□□□ 0.18
PRPF18-201ENST00000320054 TTC6Q86TZ1 520 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 IL27Q8NEV9 243 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 FAM151AQ8WW52 585 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 KIF2CQ99661 725 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 TM6SF1Q9BZW5 370 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 NBPF3Q9H094 633 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 PITPNM2Q9BZ72 1349 aa16.16■□□□□ 0.18
PRPF18-201ENST00000320054 CNTNAP1P78357 1384 aa16.15■□□□□ 0.18
PRPF18-201ENST00000320054 POLR3DP05423 398 aaPredicted RBP16.15■□□□□ 0.18
PRPF18-201ENST00000320054 SLC3A2P08195 630 aaKnown RBP16.15■□□□□ 0.18
PRPF18-201ENST00000320054 EPHX2P34913 555 aa16.15■□□□□ 0.18
PRPF18-201ENST00000320054 HIRAP54198 1017 aaPredicted RBP16.15■□□□□ 0.18
PRPF18-201ENST00000320054 TNFAIP1Q13829 316 aa16.15■□□□□ 0.18
PRPF18-201ENST00000320054 APOBEC3FQ8IUX4 373 aaKnown RBP16.15■□□□□ 0.18
PRPF18-201ENST00000320054 RNF41Q9H4P4 317 aaPredicted RBP16.15■□□□□ 0.18
PRPF18-201ENST00000320054 SAP30BPQ9UHR5 308 aaKnown RBP16.15■□□□□ 0.18
PRPF18-201ENST00000320054 TAF6LQ9Y6J9 622 aa16.15■□□□□ 0.18
PRPF18-201ENST00000320054 CYP2D7A0A087X1C5 515 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 POTECB2RU33 542 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 TCP10L2B9ZVM9 353 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 E7EWF7 191 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 FGRP09769 529 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 CYP2D6P10635 497 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 NT5C2P49902 561 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 AKNAD1Q5T1N1 836 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 TBC1D10CQ8IV04 446 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 ZFPM1Q8IX07 1006 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 STAG1Q8WVM7 1258 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 EHD4Q9H223 541 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 TAF1DQ9H5J8 278 aaPredicted RBP16.14■□□□□ 0.17
PRPF18-201ENST00000320054 VEZTQ9HBM0 779 aa16.14■□□□□ 0.17
PRPF18-201ENST00000320054 HLA-DOAP06340 250 aa16.13■□□□□ 0.17
PRPF18-201ENST00000320054 PSMA5P28066 241 aa16.13■□□□□ 0.17
PRPF18-201ENST00000320054 PLCD1P51178 756 aa16.13■□□□□ 0.17
PRPF18-201ENST00000320054 CTDSPL2Q05D32 466 aa16.13■□□□□ 0.17
PRPF18-201ENST00000320054 TCP10Q12799 353 aa16.13■□□□□ 0.17
PRPF18-201ENST00000320054 RABEP1Q15276 862 aa16.13■□□□□ 0.17
PRPF18-201ENST00000320054 STOX1Q6ZVD7 989 aa16.13■□□□□ 0.17
PRPF18-201ENST00000320054 SH3BP5LQ7L8J4 393 aa16.13■□□□□ 0.17
PRPF18-201ENST00000320054 ZC3H15Q8WU90 426 aaKnown RBP16.13■□□□□ 0.17
PRPF18-201ENST00000320054 CNNM2Q9H8M5 875 aa16.13■□□□□ 0.17
PRPF18-201ENST00000320054 PI4KBQ9UBF8 816 aa16.13■□□□□ 0.17
PRPF18-201ENST00000320054 PGAP2Q9UHJ9 254 aa16.13■□□□□ 0.17
PRPF18-201ENST00000320054 ASTN2O75129 1339 aaPredicted RBP16.13■□□□□ 0.17
PRPF18-201ENST00000320054 ORC4O43929 436 aa16.12■□□□□ 0.17
PRPF18-201ENST00000320054 HMGB1P09429 215 aaKnown RBP16.12■□□□□ 0.17
PRPF18-201ENST00000320054 PDE4BQ07343 736 aa16.12■□□□□ 0.17
PRPF18-201ENST00000320054 ADCK5Q3MIX3 580 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms