RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 SLC52A2Q9HAB3 445 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 KCNH3Q9ULD8 1083 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 A0A087X0B3 334 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 PSDA5PKW4 1024 aaPredicted RBP11.04□□□□□ -0.64
RPGR-201ENST00000318842 CYP27B1O15528 508 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 PRKAB2O43741 272 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 HOXB7P09629 217 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 METAP2P50579 478 aaKnown RBP eCLIP11.04□□□□□ -0.64
RPGR-201ENST00000318842 EVX2Q03828 476 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 NOA1Q8NC60 698 aaKnown RBP11.04□□□□□ -0.64
RPGR-201ENST00000318842 KCNG4Q8TDN1 519 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 EPSTI1Q96J88 318 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 LLPHQ9BRT6 129 aaKnown RBP11.04□□□□□ -0.64
RPGR-201ENST00000318842 EHD4Q9H223 541 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 BLZF1Q9H2G9 400 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 CALCOCO1Q9P1Z2 691 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 MAN1B1Q9UKM7 699 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 UTYO14607 1347 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
RPGR-201ENST00000318842 RBL2Q08999 1139 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 MB21D2Q8IYB1 491 aaPredicted RBP11.04□□□□□ -0.64
RPGR-201ENST00000318842 NUP133Q8WUM0 1156 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 RAPGEF4Q8WZA2 1011 aa11.04□□□□□ -0.64
RPGR-201ENST00000318842 WTIPA6NIX2 430 aaPredicted RBP11.03□□□□□ -0.64
RPGR-201ENST00000318842 TNNT3P45378 269 aaPredicted RBP11.03□□□□□ -0.64
RPGR-201ENST00000318842 EARS2Q5JPH6 523 aaKnown RBP11.03□□□□□ -0.64
RPGR-201ENST00000318842 CCDC102AQ96A19 550 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 CAPZA3Q96KX2 299 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 ABCB6Q9NP58 842 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 IMPACTQ9P2X3 320 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 A0A0G2JS52 829 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 PES1O00541 588 aaKnown RBP11.03□□□□□ -0.64
RPGR-201ENST00000318842 ZNF213O14771 459 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 ADAMTS3O15072 1205 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 CMA1P23946 247 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 CASP7P55210 303 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 DPYDQ12882 1025 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 SLC39A14Q15043 492 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 PTPAQ15257 358 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 IMMTQ16891 758 aaKnown RBP11.03□□□□□ -0.64
RPGR-201ENST00000318842 SH3TC1Q8TE82 1336 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 ARGLU1Q9NWB6 273 aaPredicted RBP11.03□□□□□ -0.64
RPGR-201ENST00000318842 WWC3Q9ULE0 1092 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 MRFAP1Q9Y605 127 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 LTN1O94822 1766 aa11.03□□□□□ -0.64
RPGR-201ENST00000318842 KDM6AO15550 1401 aaPredicted RBP11.02□□□□□ -0.64
RPGR-201ENST00000318842 PLEKHG1Q9ULL1 1385 aa11.02□□□□□ -0.64
RPGR-201ENST00000318842 MYO1CO00159 1063 aa11.02□□□□□ -0.64
RPGR-201ENST00000318842 TOB1P50616 345 aaPredicted RBP11.02□□□□□ -0.64
RPGR-201ENST00000318842 VSNL1P62760 191 aa11.02□□□□□ -0.64
RPGR-201ENST00000318842 TPM4P67936 248 aa11.02□□□□□ -0.64
RPGR-201ENST00000318842 ARHGEF25Q86VW2 580 aa11.02□□□□□ -0.64
RPGR-201ENST00000318842 ZNF274Q96GC6 653 aaPredicted RBP11.02□□□□□ -0.64
RPGR-201ENST00000318842 ANKZF1Q9H8Y5 726 aa11.02□□□□□ -0.64
RPGR-201ENST00000318842 ARFGAP3Q9NP61 516 aa11.02□□□□□ -0.64
RPGR-201ENST00000318842 A0A1W2PQ27 194 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 A0A1W2PQ64 194 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 A0A1W2PQD8 194 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 TULP2O00295 520 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 CAVIN2O95810 425 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 IBSPP21815 317 aaPredicted RBP11.02□□□□□ -0.65
RPGR-201ENST00000318842 OLFM4Q6UX06 510 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 PLIN2Q99541 437 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 DSCC1Q9BVC3 393 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 BABAM1Q9NWV8 329 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 MTMR7Q9Y216 660 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 UBN2Q6ZU65 1347 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 CASP14P31944 242 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 MCAMP43121 646 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 DNAJC21Q5F1R6 531 aaKnown RBP11.02□□□□□ -0.65
RPGR-201ENST00000318842 SLC35F6Q8N357 371 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 MIGA1Q8NAN2 632 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 MAP3K14Q99558 947 aa11.02□□□□□ -0.65
RPGR-201ENST00000318842 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.02□□□□□ -0.65
RPGR-201ENST00000318842 PIH1D3Q9NQM4 214 aaKnown RBP11.02□□□□□ -0.65
RPGR-201ENST00000318842 EFCAB8A8MWE9 144 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 FXR1P51114 621 aaKnown RBP eCLIP11.01□□□□□ -0.65
RPGR-201ENST00000318842 MAP3K9P80192 1104 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 KIF4BQ2VIQ3 1234 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 DHX37Q8IY37 1157 aaKnown RBP11.01□□□□□ -0.65
RPGR-201ENST00000318842 PSMB7Q99436 277 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 AGXT2Q9BYV1 514 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 VPS16Q9H269 839 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 KAT6BQ8WYB5 2073 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 CACNA1FO60840 1977 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 PHLPP2Q6ZVD8 1323 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 HMGB1P09429 215 aaKnown RBP11.01□□□□□ -0.65
RPGR-201ENST00000318842 PHKG2P15735 406 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 CHMP4BP1P59074 171 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 SLF1Q9BQI6 1058 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 ABCC6O95255 1503 aa11.01□□□□□ -0.65
RPGR-201ENST00000318842 MARF1Q9Y4F3 1742 aaKnown RBP11.01□□□□□ -0.65
RPGR-201ENST00000318842 GOLGA8AA7E2F4 631 aa11□□□□□ -0.65
RPGR-201ENST00000318842 YEATS4O95619 227 aa11□□□□□ -0.65
RPGR-201ENST00000318842 CABP4P57796 275 aa11□□□□□ -0.65
RPGR-201ENST00000318842 AKAP17AQ02040 695 aaKnown RBP11□□□□□ -0.65
RPGR-201ENST00000318842 APOA5Q6Q788 366 aa11□□□□□ -0.65
RPGR-201ENST00000318842 SHISA4Q96DD7 197 aa11□□□□□ -0.65
RPGR-201ENST00000318842 CABP5Q9NP86 173 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms