RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 ZFP91Q96JP5 570 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 NBPF4Q96M43 638 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 HYPKQ9NX55 129 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 DACT1Q9NYF0 836 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 RABGAP1Q9Y3P9 1069 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 ZFC3H1O60293 1989 aaKnown RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 CPSF1Q10570 1443 aaKnown RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 CFAP73A6NFT4 308 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 SRRM3A6NNA2 597 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 NOL3O60936 208 aaKnown RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 CYP2C19P33261 490 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 BIRC3Q13489 604 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 DBN1Q16643 649 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 CFAP221Q4G0U5 840 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 FERMT3Q86UX7 667 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 PLEKHM2Q8IWE5 1019 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 ZBTB9Q96C00 473 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 RABEP2Q9H5N1 569 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 TMEM63CQ9P1W3 806 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 ODF2LQ9ULJ1 636 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 FANCAO15360 1455 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 TRIP12Q14669 1992 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 SGSM2O43147 1006 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 SLC4A2P04920 1241 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 ZSCAN20P17040 1043 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 FBLN1P23142 703 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 RCSD1Q6JBY9 416 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 CWC27Q6UX04 472 aaKnown RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 PHF23Q9BUL5 403 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 CAPS2Q9BXY5 557 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 MADDQ8WXG6 1647 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 PPP1R12AO14974 1030 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 ALDH1L1O75891 902 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 KIAA0753Q2KHM9 967 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 MAATS1Q7Z4T9 603 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 RNF10Q8N5U6 811 aaKnown RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 MAP3K4Q9Y6R4 1608 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 EIF2S2P20042 333 aaKnown RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ST5P78524 1137 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CUL4AQ13619 759 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 FYB2Q5VWT5 728 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 OSBPL9Q96SU4 736 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 RAB17Q9H0T7 212 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CTTNBP2NLQ9P2B4 639 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 TCEAL9Q9UHQ7 104 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 A2MP01023 1474 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CDK12Q9NYV4 1490 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 SEMA3EO15041 775 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 SPTLC2O15270 562 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 GUCY2CP25092 1073 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 RUFY3Q7L099 469 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 RPUSD2Q8IZ73 545 aaKnown RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 DDX54Q8TDD1 881 aaKnown RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CARD14Q9BXL6 1004 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ABCC4O15439 1325 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 PPFIA2O75334 1257 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 PNMA6AP0CW24 399 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ATP2A2P16615 1042 aaKnown RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ERCC5P28715 1186 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 TMEM266Q2M3C6 531 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ERCC6LQ2NKX8 1250 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 TEX9Q8N6V9 391 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 TXLNGQ9NUQ3 528 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CARMIL3Q8ND23 1372 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ZNF518AQ6AHZ1 1483 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 TCP1P17987 556 aaKnown RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CNGA1P29973 690 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 EPHB4P54760 987 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 PAF1Q8N7H5 531 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ATRIPQ8WXE1 791 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 GTF3C6Q969F1 213 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CSRNP2Q9H175 543 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 DONSONQ9NYP3 566 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 FREM3P0C091 2139 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 DOCK7Q96N67 2140 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 SART1O43290 800 aaKnown RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 LMNB1P20700 586 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ZNF131P52739 623 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 SLC8A3P57103 927 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 RAD51AP2Q09MP3 1159 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CUL1Q13616 776 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 C10orf76Q5T2E6 689 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ARMC2Q8NEN0 867 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 TRIM4Q9C037 500 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CACNA1BQ00975 2339 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CLTCL1P53675 1640 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CIB2O75838 187 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 KRT18P05783 430 aaKnown RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 TRAF1Q13077 416 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ISM2Q6H9L7 571 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 FAM129AQ9BZQ8 928 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 OSBPL5Q9H0X9 879 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 NKIRAS1Q9NYS0 192 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CNPY2Q9Y2B0 182 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ATP7BP35670 1465 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CALML3P27482 149 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 MAN1A1P33908 653 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 HDGFL1Q5TGJ6 251 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CERS3Q8IU89 383 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 GPT2Q8TD30 523 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms