RNA–Protein interactions for RNA: ENST00000315073.9

TRIM41-201, Transcript of tripartite motif containing 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM41, Length 3,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-201ENST00000315073 IGHMBP2P38935 993 aaKnown RBP16.8■□□□□ 0.28
TRIM41-201ENST00000315073 LONRF2Q1L5Z9 754 aa16.8■□□□□ 0.28
TRIM41-201ENST00000315073 STOX1Q6ZVD7 989 aa16.8■□□□□ 0.28
TRIM41-201ENST00000315073 FSIP1Q8NA03 581 aa16.8■□□□□ 0.28
TRIM41-201ENST00000315073 PARD6BQ9BYG5 372 aa16.8■□□□□ 0.28
TRIM41-201ENST00000315073 SH3TC1Q8TE82 1336 aa16.8■□□□□ 0.28
TRIM41-201ENST00000315073 ST3GAL1Q11201 340 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 IQCB1Q15051 598 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 APPBP2Q92624 585 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 ALS2Q96Q42 1657 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 LMTK3Q96Q04 1460 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 PRC1O43663 620 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 USPL1Q5W0Q7 1092 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 NCOA7Q8NI08 942 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 GOLGA1Q92805 767 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 ACBD3Q9H3P7 528 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 TADA3O75528 432 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 TRIM28Q13263 835 aaKnown RBP16.79■□□□□ 0.28
TRIM41-201ENST00000315073 CT47A1Q5JQC4 288 aaPredicted RBP16.79■□□□□ 0.28
TRIM41-201ENST00000315073 CPLX2Q6PUV4 134 aaKnown RBP16.79■□□□□ 0.28
TRIM41-201ENST00000315073 PUS7LQ9H0K6 701 aaKnown RBP16.79■□□□□ 0.28
TRIM41-201ENST00000315073 CXorf56Q9H5V9 222 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 LRP2BPQ9P2M1 347 aa16.79■□□□□ 0.28
TRIM41-201ENST00000315073 USP8P40818 1118 aa16.78■□□□□ 0.28
TRIM41-201ENST00000315073 GPHNQ9NQX3 736 aaPredicted RBP16.78■□□□□ 0.28
TRIM41-201ENST00000315073 SCN11AQ9UI33 1791 aa16.78■□□□□ 0.28
TRIM41-201ENST00000315073 SLC5A1P13866 664 aa16.78■□□□□ 0.28
TRIM41-201ENST00000315073 TSGA10IPQ3SY00 556 aa16.78■□□□□ 0.28
TRIM41-201ENST00000315073 IMPACTQ9P2X3 320 aa16.78■□□□□ 0.28
TRIM41-201ENST00000315073 PUF60Q9UHX1 559 aaKnown RBP16.78■□□□□ 0.28
TRIM41-201ENST00000315073 POLR3DP05423 398 aaPredicted RBP16.78■□□□□ 0.28
TRIM41-201ENST00000315073 TTF1Q15361 905 aaPredicted RBP16.78■□□□□ 0.28
TRIM41-201ENST00000315073 MCTP2Q6DN12 878 aa16.78■□□□□ 0.28
TRIM41-201ENST00000315073 FOXR1Q6PIV2 292 aa16.78■□□□□ 0.28
TRIM41-201ENST00000315073 SYNE3Q6ZMZ3 975 aa16.78■□□□□ 0.28
TRIM41-201ENST00000315073 CCDC12Q8WUD4 166 aaPredicted RBP16.78■□□□□ 0.28
TRIM41-201ENST00000315073 PGBD1Q96JS3 809 aa16.78■□□□□ 0.28
TRIM41-201ENST00000315073 FAN1Q9Y2M0 1017 aa16.78■□□□□ 0.28
TRIM41-201ENST00000315073 GIMAP7Q8NHV1 300 aa16.77■□□□□ 0.28
TRIM41-201ENST00000315073 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.28
TRIM41-201ENST00000315073 PDE8BO95263 885 aa16.77■□□□□ 0.28
TRIM41-201ENST00000315073 PHKA1P46020 1223 aa16.77■□□□□ 0.28
TRIM41-201ENST00000315073 NBPF11Q86T75 865 aa16.77■□□□□ 0.28
TRIM41-201ENST00000315073 MAP3K12Q12852 859 aa16.77■□□□□ 0.27
TRIM41-201ENST00000315073 OTUD7BQ6GQQ9 843 aa16.77■□□□□ 0.27
TRIM41-201ENST00000315073 FAM212AQ96EL1 285 aa16.77■□□□□ 0.27
TRIM41-201ENST00000315073 C8orf76Q96K31 380 aa16.77■□□□□ 0.27
TRIM41-201ENST00000315073 ZNF396Q96N95 335 aaPredicted RBP16.77■□□□□ 0.27
TRIM41-201ENST00000315073 ZSCAN16Q9H4T2 348 aaPredicted RBP16.77■□□□□ 0.27
TRIM41-201ENST00000315073 RXRAP19793 462 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 KCNQ4P56696 695 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 DHX8Q14562 1220 aaKnown RBP16.76■□□□□ 0.27
TRIM41-201ENST00000315073 CNPY4Q8N129 248 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 NAPBQ9H115 298 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 MKRN1Q9UHC7 482 aaKnown RBP16.76■□□□□ 0.27
TRIM41-201ENST00000315073 FBXO3Q9UK99 471 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 PSEN1P49768 467 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 CCDC102BQ68D86 513 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 HDXQ7Z353 690 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 CCDC87Q9NVE4 849 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 COL15A1P39059 1388 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
TRIM41-201ENST00000315073 MCAMP43121 646 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 LIG3P49916 1009 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 STK38Q15208 465 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 DNAJC21Q5F1R6 531 aaKnown RBP16.76■□□□□ 0.27
TRIM41-201ENST00000315073 MMS22LQ6ZRQ5 1243 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 REXO1L1PQ8IX06 675 aa16.76■□□□□ 0.27
TRIM41-201ENST00000315073 TOP1P11387 765 aaKnown RBP16.75■□□□□ 0.27
TRIM41-201ENST00000315073 NGLY1Q96IV0 654 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 SEC31BQ9NQW1 1179 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 PHLPP2Q6ZVD8 1323 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 UQCRFS1P1P0C7P4 283 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 RDXP35241 583 aaKnown RBP16.75■□□□□ 0.27
TRIM41-201ENST00000315073 MICU3Q86XE3 530 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 CCDC82Q8N4S0 544 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 C5P01031 1676 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 LOC102724428A0A0B4J2F2 783 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 PFKFB2O60825 505 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 CRKLP46109 303 aaKnown RBP16.75■□□□□ 0.27
TRIM41-201ENST00000315073 SIK1P57059 783 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 CCDC152Q4G0S7 254 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 ARMCX5Q6P1M9 558 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 MAGEB6Q8N7X4 407 aa16.75■□□□□ 0.27
TRIM41-201ENST00000315073 ZNF532Q9HCE3 1301 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 H3BQF6 201 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 PDIA3P30101 505 aaKnown RBP16.74■□□□□ 0.27
TRIM41-201ENST00000315073 GOLGA8FQ08AF8 430 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 GOLGA8DPQ0D2H9 430 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 KARSQ15046 597 aaKnown RBP16.74■□□□□ 0.27
TRIM41-201ENST00000315073 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
TRIM41-201ENST00000315073 CCDC93Q567U6 631 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 SLC4A9Q96Q91 983 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 RIPOR2Q9Y4F9 1068 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 ERLIN2O94905 339 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 CSF1RP07333 972 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 RHOXF2BP0C7M4 288 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 MMP14P50281 582 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 PTPN21Q16825 1174 aa16.74■□□□□ 0.27
TRIM41-201ENST00000315073 RHOXF2Q9BQY4 288 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms