RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 PRPF40AO75400 957 aaKnown RBP19.63■□□□□ 0.73
CLCF1-201ENST00000312438 SLC3A2P08195 630 aaKnown RBP19.63■□□□□ 0.73
CLCF1-201ENST00000312438 CC2D2BQ6DHV5 1058 aa19.63■□□□□ 0.73
CLCF1-201ENST00000312438 DDX11Q96FC9 970 aa19.63■□□□□ 0.73
CLCF1-201ENST00000312438 LY9Q9HBG7 655 aa19.63■□□□□ 0.73
CLCF1-201ENST00000312438 LAMA4Q16363 1823 aa19.63■□□□□ 0.73
CLCF1-201ENST00000312438 ERICH2A1L162 156 aa19.62■□□□□ 0.73
CLCF1-201ENST00000312438 PTPDC1A2A3K4 754 aa19.62■□□□□ 0.73
CLCF1-201ENST00000312438 USP5P45974 858 aa19.62■□□□□ 0.73
CLCF1-201ENST00000312438 PODNQ7Z5L7 613 aa19.62■□□□□ 0.73
CLCF1-201ENST00000312438 STK11IPQ8N1F8 1099 aa19.62■□□□□ 0.73
CLCF1-201ENST00000312438 C7orf43Q8WVR3 580 aa19.62■□□□□ 0.73
CLCF1-201ENST00000312438 RTFDC1Q9BY42 306 aaPredicted RBP19.62■□□□□ 0.73
CLCF1-201ENST00000312438 LTBP1Q14766 1721 aa19.62■□□□□ 0.73
CLCF1-201ENST00000312438 PLCG2P16885 1265 aa19.62■□□□□ 0.73
CLCF1-201ENST00000312438 DOK7Q18PE1 504 aa19.62■□□□□ 0.73
CLCF1-201ENST00000312438 NFXL1Q6ZNB6 911 aa19.62■□□□□ 0.73
CLCF1-201ENST00000312438 SH3RF3Q8TEJ3 882 aaPredicted RBP19.62■□□□□ 0.73
CLCF1-201ENST00000312438 MKRN1Q9UHC7 482 aaKnown RBP19.62■□□□□ 0.73
CLCF1-201ENST00000312438 QSER1Q2KHR3 1735 aa19.62■□□□□ 0.73
CLCF1-201ENST00000312438 CYP2D7A0A087X1C5 515 aa19.61■□□□□ 0.73
CLCF1-201ENST00000312438 CHAMP1Q96JM3 812 aa19.61■□□□□ 0.73
CLCF1-201ENST00000312438 DUOX1Q9NRD9 1551 aa19.61■□□□□ 0.73
CLCF1-201ENST00000312438 CCDC69A6NI79 296 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 CPLX1O14810 134 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 BTDP43251 543 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 KLHL40Q2TBA0 621 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 APOA5Q6Q788 366 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 SYNE3Q6ZMZ3 975 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 MCM9Q9NXL9 1143 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 SLC12A7Q9Y666 1083 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 DDX49Q9Y6V7 483 aaKnown RBP19.6■□□□□ 0.73
CLCF1-201ENST00000312438 TIAM2Q8IVF5 1701 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 ZBTB43O43298 467 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 METAP2P50579 478 aaKnown RBP eCLIP19.6■□□□□ 0.73
CLCF1-201ENST00000312438 WTAPQ15007 396 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 FOXD4L6Q3SYB3 417 aaPredicted RBP19.6■□□□□ 0.73
CLCF1-201ENST00000312438 FOXD4L3Q6VB84 417 aaPredicted RBP19.6■□□□□ 0.73
CLCF1-201ENST00000312438 CDC37L1Q7L3B6 337 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 UBAC1Q9BSL1 405 aa19.6■□□□□ 0.73
CLCF1-201ENST00000312438 MYH13Q9UKX3 1938 aa19.59■□□□□ 0.73
CLCF1-201ENST00000312438 GAKO14976 1311 aa19.59■□□□□ 0.73
CLCF1-201ENST00000312438 H3BQV1 296 aa19.59■□□□□ 0.73
CLCF1-201ENST00000312438 ORC4O43929 436 aa19.59■□□□□ 0.73
CLCF1-201ENST00000312438 NT5C2P49902 561 aa19.59■□□□□ 0.73
CLCF1-201ENST00000312438 GRIPAP1Q4V328 841 aa19.59■□□□□ 0.73
CLCF1-201ENST00000312438 IFFO2Q5TF58 517 aa19.59■□□□□ 0.73
CLCF1-201ENST00000312438 AMOTL1Q8IY63 956 aa19.59■□□□□ 0.73
CLCF1-201ENST00000312438 FBXW7Q969H0 707 aa19.59■□□□□ 0.73
CLCF1-201ENST00000312438 SENP2Q9HC62 589 aa19.59■□□□□ 0.73
CLCF1-201ENST00000312438 COL11A2P13942 1736 aaPredicted RBP19.59■□□□□ 0.73
CLCF1-201ENST00000312438 SMIM22K7EJ46 135 aa19.58■□□□□ 0.73
CLCF1-201ENST00000312438 PDE4BQ07343 736 aa19.58■□□□□ 0.73
CLCF1-201ENST00000312438 C12orf60Q5U649 245 aa19.58■□□□□ 0.73
CLCF1-201ENST00000312438 CPLX2Q6PUV4 134 aaKnown RBP19.58■□□□□ 0.73
CLCF1-201ENST00000312438 SUPT20HQ8NEM7 779 aa19.58■□□□□ 0.73
CLCF1-201ENST00000312438 TGFBRAP1Q8WUH2 860 aa19.58■□□□□ 0.73
CLCF1-201ENST00000312438 ZKSCAN3Q9BRR0 538 aa19.58■□□□□ 0.73
CLCF1-201ENST00000312438 ZNF219Q9P2Y4 722 aaPredicted RBP19.58■□□□□ 0.73
CLCF1-201ENST00000312438 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.58■□□□□ 0.73
CLCF1-201ENST00000312438 MAST2Q6P0Q8 1798 aa19.58■□□□□ 0.73
CLCF1-201ENST00000312438 RANBP6O60518 1105 aaKnown RBP19.58■□□□□ 0.72
CLCF1-201ENST00000312438 IQCA1Q86XH1 822 aa19.58■□□□□ 0.72
CLCF1-201ENST00000312438 TTLL6Q8N841 843 aa19.58■□□□□ 0.72
CLCF1-201ENST00000312438 C10orf71Q711Q0 1435 aa19.57■□□□□ 0.72
CLCF1-201ENST00000312438 CDKL5O76039 1030 aa19.57■□□□□ 0.72
CLCF1-201ENST00000312438 USP17L8P0C7I0 530 aa19.57■□□□□ 0.72
CLCF1-201ENST00000312438 FDPSP14324 419 aaKnown RBP19.57■□□□□ 0.72
CLCF1-201ENST00000312438 ZSCAN10Q96SZ4 725 aaPredicted RBP19.57■□□□□ 0.72
CLCF1-201ENST00000312438 ZSCAN16Q9H4T2 348 aaPredicted RBP19.57■□□□□ 0.72
CLCF1-201ENST00000312438 CYP2D6P10635 497 aa19.56■□□□□ 0.72
CLCF1-201ENST00000312438 ADD1P35611 737 aaKnown RBP19.56■□□□□ 0.72
CLCF1-201ENST00000312438 RCAN1P53805 252 aa19.56■□□□□ 0.72
CLCF1-201ENST00000312438 RAB11FIP4Q86YS3 637 aa19.56■□□□□ 0.72
CLCF1-201ENST00000312438 CERS5Q8N5B7 392 aa19.56■□□□□ 0.72
CLCF1-201ENST00000312438 TMEM87AQ8NBN3 555 aa19.56■□□□□ 0.72
CLCF1-201ENST00000312438 GZF1Q9H116 711 aaPredicted RBP19.56■□□□□ 0.72
CLCF1-201ENST00000312438 DBNDD1Q9H9R9 158 aa19.56■□□□□ 0.72
CLCF1-201ENST00000312438 GOLGA8AA7E2F4 631 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 PRDM1O75626 825 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 DEKP35659 375 aaKnown RBP19.55■□□□□ 0.72
CLCF1-201ENST00000312438 RHBDL3P58872 404 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 FKBP1AP62942 108 aaKnown RBP19.55■□□□□ 0.72
CLCF1-201ENST00000312438 SEC23AQ15436 765 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 CSPP1Q1MSJ5 1256 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 USP48Q86UV5 1035 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 FERMT3Q86UX7 667 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 MICU3Q86XE3 530 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 TEX11Q8IYF3 940 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 ORC3Q9UBD5 711 aaPredicted RBP19.55■□□□□ 0.72
CLCF1-201ENST00000312438 TTF2Q9UNY4 1162 aaKnown RBP19.55■□□□□ 0.72
CLCF1-201ENST00000312438 CNPY2Q9Y2B0 182 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 CCDC88AQ3V6T2 1871 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 TNKSO95271 1327 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 NCLP19338 710 aaKnown RBP19.55■□□□□ 0.72
CLCF1-201ENST00000312438 DNM1Q05193 864 aaKnown RBP19.55■□□□□ 0.72
CLCF1-201ENST00000312438 STRIP1Q5VSL9 837 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 RGS22Q8NE09 1264 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 DAGLAQ9Y4D2 1042 aa19.55■□□□□ 0.72
CLCF1-201ENST00000312438 C21orf2O43822 256 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms