RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CPDO75976 1380 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 ZFYP08048 801 aaPredicted RBP9.26□□□□□ -0.93
VPS41-202ENST00000310301 SUPT20HL1Q3ZLR7 823 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 GOLGA8AA7E2F4 631 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 TRIM21P19474 475 aaKnown RBP9.26□□□□□ -0.93
VPS41-202ENST00000310301 STMN4Q9H169 189 aaPredicted RBP9.26□□□□□ -0.93
VPS41-202ENST00000310301 ZBTB1Q9Y2K1 713 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 EIF4A1P60842 406 aaKnown RBP9.26□□□□□ -0.93
VPS41-202ENST00000310301 NCAPD2Q15021 1401 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 KARSQ15046 597 aaKnown RBP9.26□□□□□ -0.93
VPS41-202ENST00000310301 IQGAP1P46940 1657 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 IQSEC2Q5JU85 1478 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 MINDY4BA8MYZ0 360 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 APBB1IPQ7Z5R6 666 aaPredicted RBP9.25□□□□□ -0.93
VPS41-202ENST00000310301 SMC6Q96SB8 1091 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 RNF123Q5XPI4 1314 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 TMEM266Q2M3C6 531 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 TCERG1LQ5VWI1 586 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 CIAPIN1Q6FI81 312 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 CTAGE1Q96RT6 745 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 SELENOOQ9BVL4 669 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 ZSCAN16Q9H4T2 348 aaPredicted RBP9.25□□□□□ -0.93
VPS41-202ENST00000310301 USP19O94966 1318 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 GOLIM4O00461 696 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 ARID4AP29374 1257 aaPredicted RBP9.25□□□□□ -0.93
VPS41-202ENST00000310301 SYKP43405 635 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 ZBTB16Q05516 673 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 TTC14Q96N46 770 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 MROH2AA6NES4 1674 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 PPFIA3O75145 1194 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 ITGA6P23229 1130 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 NLRP5P59047 1200 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 LACTBP83111 547 aaPredicted RBP9.25□□□□□ -0.93
VPS41-202ENST00000310301 SLC5A4Q9NY91 659 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 DACT1Q9NYF0 836 aa9.25□□□□□ -0.93
VPS41-202ENST00000310301 PARD3Q8TEW0 1356 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 TUBB4BP68371 445 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 C2orf69Q8N8R5 385 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 MIPOL1Q8TD10 442 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 TRIM47Q96LD4 638 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 RAB34Q9BZG1 259 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 SAMD15Q9P1V8 674 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 RASAL2Q9UJF2 1139 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 IVNS1ABPQ9Y6Y0 642 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 MROH5Q6ZUA9 1318 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 ZNF213O14771 459 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 NOL3O60936 208 aaKnown RBP9.24□□□□□ -0.93
VPS41-202ENST00000310301 TACC1O75410 805 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 GABPB1Q06547 395 aaPredicted RBP9.24□□□□□ -0.93
VPS41-202ENST00000310301 TTC22Q5TAA0 569 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 DDX12PQ92771 950 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 GIGYF1O75420 1035 aaPredicted RBP9.24□□□□□ -0.93
VPS41-202ENST00000310301 TYRO3Q06418 890 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 AFAP1L1Q8TED9 768 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 IQCGQ9H095 443 aaKnown RBP9.24□□□□□ -0.93
VPS41-202ENST00000310301 CCDC8Q9H0W5 538 aaPredicted RBP9.24□□□□□ -0.93
VPS41-202ENST00000310301 LEMD3Q9Y2U8 911 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 SMIM23A6NLE4 172 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 PRC1O43663 620 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 AMPD3Q01432 767 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 PUM3Q15397 648 aaKnown RBP9.24□□□□□ -0.93
VPS41-202ENST00000310301 ZNF569Q5MCW4 686 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 ERO1AQ96HE7 468 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 LZTFL1Q9NQ48 299 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 USP16Q9Y5T5 823 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 KIF13AQ9H1H9 1805 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 CARMIL3Q8ND23 1372 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 CHL1O00533 1208 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 CYP7A1P22680 504 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 FAM160A1Q05DH4 1040 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 B4GALNT4Q76KP1 1039 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 NECAB1Q8N987 351 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 CTCFLQ8NI51 663 aaPredicted RBP9.24□□□□□ -0.93
VPS41-202ENST00000310301 IFT81Q8WYA0 676 aa9.24□□□□□ -0.93
VPS41-202ENST00000310301 HEG1Q9ULI3 1381 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 CCDC194A0A1B0GVG4 234 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 RIOK3O14730 519 aaKnown RBP9.23□□□□□ -0.93
VPS41-202ENST00000310301 INPP5BP32019 993 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 RRAGBQ5VZM2 374 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 CCDC144CPQ8IYA2 1237 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 MARCH10Q8NA82 808 aaPredicted RBP9.23□□□□□ -0.93
VPS41-202ENST00000310301 TSNARE1Q96NA8 513 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 AS3MTQ9HBK9 375 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 STIM2Q9P246 746 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 E9PCH4 1651 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 XDHP47989 1333 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 SETBP1Q9Y6X0 1596 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 BUB1BO60566 1050 aaPredicted RBP9.23□□□□□ -0.93
VPS41-202ENST00000310301 EVCP57679 992 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 ARFGAP2Q8N6H7 521 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 PPFIBP2Q8ND30 876 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 PTPRUQ92729 1446 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 NEXMIFQ5QGS0 1516 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 IDEP14735 1019 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 RAB3GAP1Q15042 981 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 CCDC77Q9BR77 488 aa9.23□□□□□ -0.93
VPS41-202ENST00000310301 ORC3Q9UBD5 711 aaPredicted RBP9.23□□□□□ -0.93
VPS41-202ENST00000310301 FEZ2Q9UHY8 353 aaPredicted RBP9.23□□□□□ -0.93
VPS41-202ENST00000310301 IFIT3O14879 490 aaKnown RBP9.23□□□□□ -0.93
VPS41-202ENST00000310301 PCCAP05165 728 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms