RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 NECTIN1Q15223 517 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 TBC1D9BQ66K14 1250 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 GALNT17Q6IS24 598 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 ZNF713Q8N859 430 aaPredicted RBP6.91□□□□□ -1.3
SEC22A-201ENST00000309934 ZNF513Q8N8E2 541 aaPredicted RBP6.91□□□□□ -1.3
SEC22A-201ENST00000309934 KCNG4Q8TDN1 519 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 KLF18A0A0U1RQI7 1052 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 PFKFB2O60825 505 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 RBM5P52756 815 aaKnown RBP eCLIP6.91□□□□□ -1.3
SEC22A-201ENST00000309934 DMTNQ08495 405 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 PODNQ7Z5L7 613 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 BRF1Q92994 677 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 RAB34Q9BZG1 259 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 MINPP1Q9UNW1 487 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 RANBP6O60518 1105 aaKnown RBP6.91□□□□□ -1.3
SEC22A-201ENST00000309934 HOXA7P31268 230 aaPredicted RBP6.91□□□□□ -1.3
SEC22A-201ENST00000309934 CCDC93Q567U6 631 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 CCDC17Q96LX7 622 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 FAM227BQ96M60 508 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 LRRC27Q9C0I9 530 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 SALL1Q9NSC2 1324 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 SEC24BO95487 1268 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 TSPY3P0CV98 308 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 TSPY8P0CW00 308 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 CCDC192P0DO97 292 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 RASSF8Q8NHQ8 419 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 TNPO1Q92973 898 aaKnown RBP6.9□□□□□ -1.3
SEC22A-201ENST00000309934 TEKT1Q969V4 418 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 RNF216Q9NWF9 866 aaPredicted RBP6.9□□□□□ -1.3
SEC22A-201ENST00000309934 ORC3Q9UBD5 711 aaPredicted RBP6.9□□□□□ -1.3
SEC22A-201ENST00000309934 KCNG1Q9UIX4 513 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 A0A0D9SFI3 127 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 TMCO5BA8MYB1 307 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 E7EWF7 191 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 KCNQ2O43526 872 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 DEXIO95424 95 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 F13A1P00488 732 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 TNFAIP1Q13829 316 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 NFIXQ14938 502 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 TEX35Q5T0J7 233 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 CCDC183Q5T5S1 534 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 CTR9Q6PD62 1173 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 IFNL3Q8IZI9 196 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 MNS1Q8NEH6 495 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 PUS3Q9BZE2 481 aaKnown RBP6.9□□□□□ -1.3
SEC22A-201ENST00000309934 DHX36Q9H2U1 1008 aaKnown RBP6.9□□□□□ -1.3
SEC22A-201ENST00000309934 CWC15Q9P013 229 aaKnown RBP6.9□□□□□ -1.3
SEC22A-201ENST00000309934 PRDM4Q9UKN5 801 aa6.9□□□□□ -1.3
SEC22A-201ENST00000309934 PES1O00541 588 aaKnown RBP6.9□□□□□ -1.31
SEC22A-201ENST00000309934 BAG4O95429 457 aaKnown RBP6.9□□□□□ -1.31
SEC22A-201ENST00000309934 LIFRP42702 1097 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 PHKA1P46020 1223 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 FKBP1AP62942 108 aaKnown RBP6.9□□□□□ -1.31
SEC22A-201ENST00000309934 TNIP1Q15025 636 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 LRCH2Q5VUJ6 765 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 OLFM4Q6UX06 510 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 TEX11Q8IYF3 940 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 HELBQ8NG08 1087 aaPredicted RBP6.9□□□□□ -1.31
SEC22A-201ENST00000309934 TSPY26PQ9H489 355 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 TMEM51Q9NW97 253 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 PAPPAQ13219 1627 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 HDLBPQ00341 1268 aaKnown RBP6.9□□□□□ -1.31
SEC22A-201ENST00000309934 PPARAQ07869 468 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 GPS2Q13227 327 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 UVSSAQ2YD98 709 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 SKAP1Q86WV1 359 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 NUP133Q8WUM0 1156 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 GTF3C6Q969F1 213 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 KAZALD1Q96I82 304 aa6.9□□□□□ -1.31
SEC22A-201ENST00000309934 CCDC94Q9BW85 323 aaPredicted RBP6.9□□□□□ -1.31
SEC22A-201ENST00000309934 BECN2A8MW95 431 aa6.89□□□□□ -1.31
SEC22A-201ENST00000309934 RAD21O60216 631 aa6.89□□□□□ -1.31
SEC22A-201ENST00000309934 HOXA10P31260 410 aaPredicted RBP6.89□□□□□ -1.31
SEC22A-201ENST00000309934 NIM1KQ8IY84 436 aa6.89□□□□□ -1.31
SEC22A-201ENST00000309934 AFDNP55196 1824 aaKnown RBP6.89□□□□□ -1.31
SEC22A-201ENST00000309934 PRPF40AO75400 957 aaKnown RBP6.89□□□□□ -1.31
SEC22A-201ENST00000309934 FGFR2P21802 821 aa6.89□□□□□ -1.31
SEC22A-201ENST00000309934 ZSCAN29Q8IWY8 852 aaPredicted RBP6.89□□□□□ -1.31
SEC22A-201ENST00000309934 MCM9Q9NXL9 1143 aa6.89□□□□□ -1.31
SEC22A-201ENST00000309934 ATP6V0A2Q9Y487 856 aa6.89□□□□□ -1.31
SEC22A-201ENST00000309934 FBXO33Q7Z6M2 555 aa6.89□□□□□ -1.31
SEC22A-201ENST00000309934 FBXL16Q8N461 479 aa6.89□□□□□ -1.31
SEC22A-201ENST00000309934 TTC14Q96N46 770 aa6.89□□□□□ -1.31
SEC22A-201ENST00000309934 LOC102724159A0A0B4J2E5 919 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 SMC2O95347 1197 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 TPM1P09493 284 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 GNA11P29992 359 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 EIF6P56537 245 aaKnown RBP6.88□□□□□ -1.31
SEC22A-201ENST00000309934 STK3Q13188 491 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 PWP2Q15269 919 aaKnown RBP6.88□□□□□ -1.31
SEC22A-201ENST00000309934 STAG1Q8WVM7 1258 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 CUL5Q93034 780 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 TLR7Q9NYK1 1049 aaKnown RBP6.88□□□□□ -1.31
SEC22A-201ENST00000309934 USP25Q9UHP3 1055 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 ARFGEF2Q9Y6D5 1785 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 UBN2Q6ZU65 1347 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 KDM4AO75164 1064 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 ADORA1P30542 326 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 SBK1Q52WX2 424 aa6.88□□□□□ -1.31
SEC22A-201ENST00000309934 PRR5LQ6MZQ0 368 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms