RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 ERICH2A1L162 156 aa23.46■■□□□ 1.35
SSH3-202ENST00000308298 MINDY4BA8MYZ0 360 aa23.46■■□□□ 1.35
SSH3-202ENST00000308298 CLCN1P35523 988 aa23.46■■□□□ 1.35
SSH3-202ENST00000308298 WTAPQ15007 396 aa23.46■■□□□ 1.35
SSH3-202ENST00000308298 MYL10Q9BUA6 226 aa23.46■■□□□ 1.35
SSH3-202ENST00000308298 QTRT2Q9H974 415 aaKnown RBP23.46■■□□□ 1.35
SSH3-202ENST00000308298 FAM217BQ9NTX9 383 aaPredicted RBP23.46■■□□□ 1.35
SSH3-202ENST00000308298 LAMB1P07942 1786 aa23.46■■□□□ 1.35
SSH3-202ENST00000308298 KIF23Q02241 960 aaPredicted RBP23.45■■□□□ 1.35
SSH3-202ENST00000308298 MECOMQ03112 1051 aa23.45■■□□□ 1.35
SSH3-202ENST00000308298 GJB4Q9NTQ9 266 aa23.45■■□□□ 1.35
SSH3-202ENST00000308298 MYH2Q9UKX2 1941 aa23.45■■□□□ 1.34
SSH3-202ENST00000308298 IARSP41252 1262 aaKnown RBP23.45■■□□□ 1.34
SSH3-202ENST00000308298 CHAF1AQ13111 956 aaPredicted RBP23.45■■□□□ 1.34
SSH3-202ENST00000308298 STK11IPQ8N1F8 1099 aa23.45■■□□□ 1.34
SSH3-202ENST00000308298 PHKBQ93100 1093 aa23.45■■□□□ 1.34
SSH3-202ENST00000308298 STK36Q9NRP7 1315 aa23.45■■□□□ 1.34
SSH3-202ENST00000308298 SLC27A3Q5K4L6 730 aa23.44■■□□□ 1.34
SSH3-202ENST00000308298 PRR5LQ6MZQ0 368 aa23.44■■□□□ 1.34
SSH3-202ENST00000308298 TMED8Q6PL24 325 aaPredicted RBP23.44■■□□□ 1.34
SSH3-202ENST00000308298 TXNRD3Q86VQ6 643 aa23.44■■□□□ 1.34
SSH3-202ENST00000308298 CCAR1Q8IX12 1150 aaKnown RBP23.44■■□□□ 1.34
SSH3-202ENST00000308298 TMTC2Q8N394 836 aa23.44■■□□□ 1.34
SSH3-202ENST00000308298 ZKSCAN3Q9BRR0 538 aa23.44■■□□□ 1.34
SSH3-202ENST00000308298 RANBP6O60518 1105 aaKnown RBP23.43■■□□□ 1.34
SSH3-202ENST00000308298 TYRO3Q06418 890 aa23.43■■□□□ 1.34
SSH3-202ENST00000308298 MYSM1Q5VVJ2 828 aa23.43■■□□□ 1.34
SSH3-202ENST00000308298 ZSCAN30Q86W11 494 aa23.43■■□□□ 1.34
SSH3-202ENST00000308298 ESR2Q92731 530 aa23.43■■□□□ 1.34
SSH3-202ENST00000308298 AIFM3Q96NN9 605 aa23.43■■□□□ 1.34
SSH3-202ENST00000308298 LEMD3Q9Y2U8 911 aa23.43■■□□□ 1.34
SSH3-202ENST00000308298 POLR3DP05423 398 aaPredicted RBP23.43■■□□□ 1.34
SSH3-202ENST00000308298 ME1P48163 572 aa23.43■■□□□ 1.34
SSH3-202ENST00000308298 CKAP2LQ8IYA6 745 aa23.43■■□□□ 1.34
SSH3-202ENST00000308298 UBAC1Q9BSL1 405 aa23.43■■□□□ 1.34
SSH3-202ENST00000308298 POLR3EQ9NVU0 708 aa23.43■■□□□ 1.34
SSH3-202ENST00000308298 ANKIB1Q9P2G1 1089 aa23.43■■□□□ 1.34
SSH3-202ENST00000308298 KIF28PB7ZC32 967 aa23.42■■□□□ 1.34
SSH3-202ENST00000308298 GYS1P13807 737 aa23.42■■□□□ 1.34
SSH3-202ENST00000308298 PRDX5P30044 214 aa23.42■■□□□ 1.34
SSH3-202ENST00000308298 RCAN1P53805 252 aa23.42■■□□□ 1.34
SSH3-202ENST00000308298 CCDC73Q6ZRK6 1079 aa23.42■■□□□ 1.34
SSH3-202ENST00000308298 DLEC1Q9Y238 1755 aa23.42■■□□□ 1.34
SSH3-202ENST00000308298 YEATS4O95619 227 aa23.42■■□□□ 1.34
SSH3-202ENST00000308298 KRT40Q6A162 431 aa23.42■■□□□ 1.34
SSH3-202ENST00000308298 LINC00301Q8NCQ3 95 aa23.42■■□□□ 1.34
SSH3-202ENST00000308298 USP25Q9UHP3 1055 aa23.42■■□□□ 1.34
SSH3-202ENST00000308298 XDHP47989 1333 aa23.41■■□□□ 1.34
SSH3-202ENST00000308298 PCP11498 1178 aaKnown RBP23.41■■□□□ 1.34
SSH3-202ENST00000308298 IFNAR1P17181 557 aa23.41■■□□□ 1.34
SSH3-202ENST00000308298 SSRP1Q08945 709 aaKnown RBP23.41■■□□□ 1.34
SSH3-202ENST00000308298 RTN1Q16799 776 aa23.41■■□□□ 1.34
SSH3-202ENST00000308298 GOLPH3LQ9H4A5 285 aa23.41■■□□□ 1.34
SSH3-202ENST00000308298 MRVI1Q9Y6F6 885 aa23.41■■□□□ 1.34
SSH3-202ENST00000308298 FMNL1O95466 1100 aaPredicted RBP23.4■■□□□ 1.34
SSH3-202ENST00000308298 STK38Q15208 465 aa23.4■■□□□ 1.34
SSH3-202ENST00000308298 SPTY2D1Q68D10 685 aaPredicted RBP23.4■■□□□ 1.34
SSH3-202ENST00000308298 KCNG4Q8TDN1 519 aa23.4■■□□□ 1.34
SSH3-202ENST00000308298 RPGRQ92834 1020 aaKnown RBP23.4■■□□□ 1.34
SSH3-202ENST00000308298 SLC26A6Q9BXS9 759 aa23.4■■□□□ 1.34
SSH3-202ENST00000308298 CRNKL1Q9BZJ0 848 aaKnown RBP23.4■■□□□ 1.34
SSH3-202ENST00000308298 CCDC39Q9UFE4 941 aa23.4■■□□□ 1.34
SSH3-202ENST00000308298 CLIC4Q9Y696 253 aa23.4■■□□□ 1.34
SSH3-202ENST00000308298 ST5P78524 1137 aa23.4■■□□□ 1.34
SSH3-202ENST00000308298 TRIM29Q14134 588 aa23.4■■□□□ 1.34
SSH3-202ENST00000308298 CTR9Q6PD62 1173 aa23.4■■□□□ 1.34
SSH3-202ENST00000308298 KRT27Q7Z3Y8 459 aa23.4■■□□□ 1.34
SSH3-202ENST00000308298 AATFQ9NY61 560 aaKnown RBP eCLIP23.4■■□□□ 1.34
SSH3-202ENST00000308298 PCDHA7Q9UN72 937 aa23.4■■□□□ 1.34
SSH3-202ENST00000308298 TNKSO95271 1327 aa23.39■■□□□ 1.34
SSH3-202ENST00000308298 SMIM22K7EJ46 135 aa23.39■■□□□ 1.34
SSH3-202ENST00000308298 FAM160A1Q05DH4 1040 aa23.39■■□□□ 1.34
SSH3-202ENST00000308298 SEC23AQ15436 765 aa23.39■■□□□ 1.34
SSH3-202ENST00000308298 ZNF654Q8IZM8 581 aa23.39■■□□□ 1.34
SSH3-202ENST00000308298 FAM200AQ8TCP9 573 aa23.39■■□□□ 1.34
SSH3-202ENST00000308298 WASF1Q92558 559 aa23.39■■□□□ 1.34
SSH3-202ENST00000308298 MYH6P13533 1939 aa23.39■■□□□ 1.33
SSH3-202ENST00000308298 CYP2D7A0A087X1C5 515 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 CCDC196A0A1B0GTZ2 297 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 CTAGE5O15320 804 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 SERPINB2P05120 415 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 FGRP09769 529 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 CRY2Q49AN0 593 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 ADALQ6DHV7 355 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 FSIP1Q8NA03 581 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 A0A1W2PQ27 194 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 A0A1W2PQ64 194 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 A0A1W2PQD8 194 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 IGSF3O75054 1194 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 SNW1Q13573 536 aaKnown RBP23.38■■□□□ 1.33
SSH3-202ENST00000308298 SF3A1Q15459 793 aaKnown RBP23.38■■□□□ 1.33
SSH3-202ENST00000308298 SASS6Q6UVJ0 657 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 SLC51AQ86UW1 340 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 DZIP1Q86YF9 867 aaKnown RBP23.38■■□□□ 1.33
SSH3-202ENST00000308298 ENGASEQ8NFI3 743 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 ATP8A2Q9NTI2 1148 aa23.38■■□□□ 1.33
SSH3-202ENST00000308298 USP17L12C9JPN9 530 aa23.37■■□□□ 1.33
SSH3-202ENST00000308298 USP17L21D6R901 530 aa23.37■■□□□ 1.33
SSH3-202ENST00000308298 ANO1Q5XXA6 986 aa23.37■■□□□ 1.33
SSH3-202ENST00000308298 TRIM22Q8IYM9 498 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms