RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 FKBP15Q5T1M5 1219 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 OTUD7BQ6GQQ9 843 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 PAF1Q8N7H5 531 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 TDRD7Q8NHU6 1098 aaKnown RBP12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 CAGE1Q8TC20 777 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 IFNKQ9P0W0 207 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 FMN2Q9NZ56 1722 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 LMOD1P29536 600 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 CTDSPL2Q05D32 466 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 NKX1-1Q15270 411 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 KIAA1468Q9P260 1216 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 NSFL1CQ9UNZ2 370 aaKnown RBP12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 KIF20AO95235 890 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 IQCEQ6IPM2 695 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 MLKLQ8NB16 471 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 MRFAP1L1Q96HT8 127 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 C8orf37Q96NL8 207 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 STX8Q9UNK0 236 aa12.43□□□□□ -0.42
PCDHGC4-201ENST00000306593 GNPATO15228 680 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 IQUBQ8NA54 791 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 ZKSCAN3Q9BRR0 538 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 MRVI1Q9Y6F6 885 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 HLA-DOAP06340 250 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 RFX5P48382 616 aaPredicted RBP12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 NAP1L1P55209 391 aaKnown RBP12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 RBM6P78332 1123 aaKnown RBP12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 ATG9AQ7Z3C6 839 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 FAM177A1Q8N128 213 aaPredicted RBP12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 PDLIM2Q96JY6 352 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 CDC25BP30305 580 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 CRACR2BQ8N4Y2 399 aaPredicted RBP12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 TSG101Q99816 390 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 SRRTQ9BXP5 876 aaKnown RBP12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 ZNF335Q9H4Z2 1342 aaPredicted RBP12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 RBM5P52756 815 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 TRAPPC3LQ5T215 181 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 PHKBQ93100 1093 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 FERMT2Q96AC1 680 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 CABP5Q9NP86 173 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 ARPP21Q9UBL0 812 aaPredicted RBP12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 PCDHA7Q9UN72 937 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 PXDNQ92626 1479 aa12.42□□□□□ -0.42
PCDHGC4-201ENST00000306593 MST1RQ04912 1400 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 STAT6P42226 847 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 CHRNDQ07001 517 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 DHX58Q96C10 678 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 DEF6Q9H4E7 631 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 URI1O94763 535 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 RPS8P62241 208 aaKnown RBP12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 TMED8Q6PL24 325 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 NOSTRINQ8IVI9 506 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 ZSCAN29Q8IWY8 852 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 ZNF654Q8IZM8 581 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 C6orf50Q9HD87 102 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 CCNL1Q9UK58 526 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 PPP6R2O75170 966 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 NT5C2P49902 561 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 APOA5Q6Q788 366 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 TIGD1Q96MW7 591 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 PUS7LQ9H0K6 701 aaKnown RBP12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 TMOD2Q9NZR1 351 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 PIK3C2AO00443 1686 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 TMCO3Q6UWJ1 677 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 MYRIPQ8NFW9 859 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 IL17RAQ96F46 866 aa12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 NUP88Q99567 741 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC4-201ENST00000306593 COL15A1P39059 1388 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 UBAP1LF5GYI3 381 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 MPHOSPH10O00566 681 aaKnown RBP12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 DTNBO60941 627 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 GNA11P29992 359 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 LIFRP42702 1097 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 AFMP43652 599 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 RRAGBQ5VZM2 374 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 SMARCC2Q8TAQ2 1214 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 GBP3Q9H0R5 595 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 PFKFB1P16118 471 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 SLC39A14Q15043 492 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 CNBD1Q8NA66 436 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 SH2B2O14492 632 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 FANCBQ8NB91 859 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 MTA3Q9BTC8 594 aa12.4□□□□□ -0.42
PCDHGC4-201ENST00000306593 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 N4BP3O15049 544 aa12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 EIF3JO75822 258 aaKnown RBP12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 ADD1P35611 737 aaKnown RBP12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 BCAMP50895 628 aa12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 CLEC4GQ6UXB4 293 aa12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 KIAA1328Q86T90 577 aa12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 RBM17Q96I25 401 aaKnown RBP12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 TANGO6Q9C0B7 1094 aa12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 DLG5Q8TDM6 1919 aa12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 TOPAZ1Q8N9V7 1692 aa12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 PEAK1Q9H792 1746 aa12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 KDM6AO15550 1401 aaPredicted RBP12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 CYP19A1P11511 503 aaPredicted RBP12.39□□□□□ -0.43
PCDHGC4-201ENST00000306593 CCDC96Q2M329 555 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms