RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 IRX3P78415 501 aaPredicted RBP9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 PICALMQ13492 652 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 GPR108Q9NPR9 543 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 KRT13P13646 458 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 ABCD1P33897 745 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 TTLL6Q8N841 843 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 KNDC1Q76NI1 1749 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 UQCRHLA0A096LP55 91 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 POTEB2H3BUK9 544 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 TOP1P11387 765 aaKnown RBP9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 MFSD14BQ5SR56 506 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 ORC3Q9UBD5 711 aaPredicted RBP9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
PCDHB1-201ENST00000306549 DHX32Q7L7V1 743 aaKnown RBP9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 POLR3GO15318 223 aaPredicted RBP9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 GRIN3BO60391 1043 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 CDC37L1Q7L3B6 337 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 FILIP1Q7Z7B0 1213 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 DDX11Q96FC9 970 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 HAUS2Q9NVX0 235 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 SLIT1O75093 1534 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 CEP83Q9Y592 693 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 ATP2A1O14983 1001 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 HLTFQ14527 1009 aaKnown RBP eCLIP9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 KIF4BQ2VIQ3 1234 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 MAP7D1Q3KQU3 841 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 BCS1LQ9Y276 419 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 RPAP1Q9BWH6 1393 aaPredicted RBP9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 VIMP08670 466 aaKnown RBP9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 TNNI3KQ59H18 835 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 ARHGAP27Q6ZUM4 889 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 EHBP1Q8NDI1 1231 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 SMCR8Q8TEV9 937 aaPredicted RBP9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 ANAPC4Q9UJX5 808 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 FPGT-TNNI3KV9GXZ4 949 aa9.4□□□□□ -0.9
PCDHB1-201ENST00000306549 F8W031 263 aaPredicted RBP9.4□□□□□ -0.91
PCDHB1-201ENST00000306549 KIAA0753Q2KHM9 967 aa9.4□□□□□ -0.91
PCDHB1-201ENST00000306549 SNRKQ9NRH2 765 aa9.4□□□□□ -0.91
PCDHB1-201ENST00000306549 ZBTB40Q9NUA8 1239 aa9.4□□□□□ -0.91
PCDHB1-201ENST00000306549 BCCIPQ9P287 314 aaKnown RBP eCLIP9.4□□□□□ -0.91
PCDHB1-201ENST00000306549 ANXA1P04083 346 aa9.4□□□□□ -0.91
PCDHB1-201ENST00000306549 HAUS3Q68CZ6 603 aa9.4□□□□□ -0.91
PCDHB1-201ENST00000306549 BARGINQ6ZT62 677 aa9.4□□□□□ -0.91
PCDHB1-201ENST00000306549 CCDC155Q8N6L0 562 aa9.4□□□□□ -0.91
PCDHB1-201ENST00000306549 PPEF1O14829 653 aaPredicted RBP9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 UQCRHP07919 91 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 PRPF4BQ13523 1007 aaKnown RBP9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 ARMC9Q7Z3E5 817 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 KBTBD3Q8NAB2 608 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 PIM2Q9P1W9 311 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 RIMBP2O15034 1052 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 RC3H1Q5TC82 1133 aaKnown RBP9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 TBC1D9Q6ZT07 1266 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 MKRN1Q9UHC7 482 aaKnown RBP9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 TNNT1P13805 278 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 SDSP20132 328 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 CKAP4Q07065 602 aaKnown RBP9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 CWF19L2Q2TBE0 894 aaKnown RBP9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 EXOC8Q8IYI6 725 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 CNNM3Q8NE01 707 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 MASTLQ96GX5 879 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 DHX36Q9H2U1 1008 aaKnown RBP9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 RNF216Q9NWF9 866 aaPredicted RBP9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 A0A1W2PRG0 241 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 IQCA1LA6NCM1 817 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 A1BGP04217 495 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 HCLS1P14317 486 aaPredicted RBP9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 SPAG1Q07617 926 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 SPATA5Q8NB90 893 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 CTAGE1Q96RT6 745 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 ESYT1Q9BSJ8 1104 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 RABGAP1Q9Y3P9 1069 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 GMNNO75496 209 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 IDEP14735 1019 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 FBLN1P23142 703 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 SMTNP53814 917 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 SMC5Q8IY18 1101 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 SLC26A6Q9BXS9 759 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 TSHZ2Q9NRE2 1034 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 SUGT1Q9Y2Z0 365 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 RGS12O14924 1447 aa9.39□□□□□ -0.91
PCDHB1-201ENST00000306549 RPS6KA4O75676 772 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 TFCP2Q12800 502 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 GALNT17Q6IS24 598 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 KRT2P35908 639 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 USP14P54578 494 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 GABPB2Q8TAK5 448 aaPredicted RBP9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 RASAL2Q9UJF2 1139 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 GOLGA6L9A6NEM1 432 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 CCDC102BQ68D86 513 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 SSH2Q76I76 1423 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 NOD1Q9Y239 953 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 ZNF804BA4D1E1 1349 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 SMARCA5O60264 1052 aaPredicted RBP9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 XAGE2Q96GT9 111 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 EXOC1Q9NV70 894 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 TXNDC16Q9P2K2 825 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 SLC1A4P43007 532 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 CCDC183Q5T5S1 534 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 MCF2L2Q86YR7 1114 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms