RNA–Protein interactions for RNA: ENST00000301904.3

SCARA3-201, Transcript of scavenger receptor class A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARA3, Length 3,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-201ENST00000301904 CTAGE4Q8IX94 777 aa11.88□□□□□ -0.51
SCARA3-201ENST00000301904 ZNF609O15014 1411 aa11.88□□□□□ -0.51
SCARA3-201ENST00000301904 LMTK2Q8IWU2 1503 aa11.88□□□□□ -0.51
SCARA3-201ENST00000301904 IKBKBO14920 756 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 PPFIA4O75335 1185 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 HNRNPH1P31943 449 aaKnown RBP11.87□□□□□ -0.51
SCARA3-201ENST00000301904 ARMC3Q5W041 872 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
SCARA3-201ENST00000301904 PIK3C2BO00750 1634 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 STX10O60499 249 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 NLRP6P59044 892 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 PSMD2Q13200 908 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 LLPHQ9BRT6 129 aaKnown RBP11.87□□□□□ -0.51
SCARA3-201ENST00000301904 ALDH8A1Q9H2A2 487 aaPredicted RBP11.87□□□□□ -0.51
SCARA3-201ENST00000301904 GRIN1Q05586 938 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 GPIHBP1Q8IV16 184 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 NGDNQ8NEJ9 315 aaKnown RBP11.87□□□□□ -0.51
SCARA3-201ENST00000301904 FAM71BQ8TC56 605 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 N4BP2L2Q92802 583 aaPredicted RBP11.87□□□□□ -0.51
SCARA3-201ENST00000301904 PHKBQ93100 1093 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 KAT14Q9H8E8 782 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
SCARA3-201ENST00000301904 CTAGE9A4FU28 777 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 BTBD11A6QL63 1104 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 MYO1FO00160 1098 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 GRM8O00222 908 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 SYF2O95926 243 aaKnown RBP11.86□□□□□ -0.51
SCARA3-201ENST00000301904 SMYD4Q8IYR2 804 aaPredicted RBP11.86□□□□□ -0.51
SCARA3-201ENST00000301904 CEP112Q8N8E3 955 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 DENND2AQ9ULE3 1009 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 ADGRG1Q9Y653 693 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 FAM169AQ9Y6X4 670 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 ABCA9Q8IUA7 1624 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 PPP1R12AO14974 1030 aaPredicted RBP11.86□□□□□ -0.51
SCARA3-201ENST00000301904 SSBP05455 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
SCARA3-201ENST00000301904 GGCXP38435 758 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 USPL1Q5W0Q7 1092 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 EFCAB13Q8IY85 973 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 CCDC82Q8N4S0 544 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 G3BP2Q9UN86 482 aaKnown RBP11.86□□□□□ -0.51
SCARA3-201ENST00000301904 CEP170BQ9Y4F5 1589 aaPredicted RBP11.86□□□□□ -0.51
SCARA3-201ENST00000301904 ALKQ9UM73 1620 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 A0A087WUV0 522 aaPredicted RBP11.86□□□□□ -0.51
SCARA3-201ENST00000301904 AKR1B15C9JRZ8 316 aaPredicted RBP11.86□□□□□ -0.51
SCARA3-201ENST00000301904 CMA1P23946 247 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 PPFIBP1Q86W92 1011 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 SLF1Q9BQI6 1058 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 GUCA1BQ9UMX6 200 aa11.86□□□□□ -0.51
SCARA3-201ENST00000301904 CCT6AP40227 531 aaKnown RBP11.85□□□□□ -0.51
SCARA3-201ENST00000301904 CLNS1AP54105 237 aaKnown RBP11.85□□□□□ -0.51
SCARA3-201ENST00000301904 TIMM10P62072 90 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 CEP120Q8N960 986 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 CAPN7Q9Y6W3 813 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 CASP14P31944 242 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 RBM5P52756 815 aaKnown RBP eCLIP11.85□□□□□ -0.51
SCARA3-201ENST00000301904 KCNV1Q6PIU1 500 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 KIRREL3Q8IZU9 778 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 BCAS4Q8TDM0 211 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 C19orf44Q9H6X5 657 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 CD248Q9HCU0 757 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 SEC31BQ9NQW1 1179 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 GOLGA6L9A6NEM1 432 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 TBX2Q13207 712 aaPredicted RBP11.85□□□□□ -0.51
SCARA3-201ENST00000301904 STAMQ92783 540 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 MYL10Q9BUA6 226 aa11.85□□□□□ -0.51
SCARA3-201ENST00000301904 SLC9C2Q5TAH2 1124 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 FCHSD1Q86WN1 690 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 VEZTQ9HBM0 779 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.84□□□□□ -0.51
SCARA3-201ENST00000301904 MYO5BQ9ULV0 1848 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 CCDC196A0A1B0GTZ2 297 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 YEATS4O95619 227 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 EXOSC10Q01780 885 aaKnown RBP11.84□□□□□ -0.51
SCARA3-201ENST00000301904 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
SCARA3-201ENST00000301904 CCDC102BQ68D86 513 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 POLR3EQ9NVU0 708 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 MAN1B1Q9UKM7 699 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 RAB21Q9UL25 225 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 KCNH3Q9ULD8 1083 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 XRN1Q8IZH2 1706 aaKnown RBP11.84□□□□□ -0.51
SCARA3-201ENST00000301904 FRMPD1Q5SYB0 1578 aa11.84□□□□□ -0.51
SCARA3-201ENST00000301904 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.51
SCARA3-201ENST00000301904 PTCD1O75127 700 aaKnown RBP11.83□□□□□ -0.51
SCARA3-201ENST00000301904 MYBL2P10244 700 aa11.83□□□□□ -0.51
SCARA3-201ENST00000301904 MATR3P43243 847 aaKnown RBP eCLIP11.83□□□□□ -0.51
SCARA3-201ENST00000301904 AFMP43652 599 aa11.83□□□□□ -0.51
SCARA3-201ENST00000301904 NBPF20Q3BBV1 942 aa11.83□□□□□ -0.51
SCARA3-201ENST00000301904 TNNI3KQ59H18 835 aa11.83□□□□□ -0.51
SCARA3-201ENST00000301904 MED15Q96RN5 788 aa11.83□□□□□ -0.51
SCARA3-201ENST00000301904 FAM107BQ9H098 131 aa11.83□□□□□ -0.51
SCARA3-201ENST00000301904 MED4Q9NPJ6 270 aa11.83□□□□□ -0.51
SCARA3-201ENST00000301904 SERTAD1Q9UHV2 236 aa11.83□□□□□ -0.51
SCARA3-201ENST00000301904 HOOK1Q9UJC3 728 aaKnown RBP11.83□□□□□ -0.51
SCARA3-201ENST00000301904 FPGT-TNNI3KV9GXZ4 949 aa11.83□□□□□ -0.51
SCARA3-201ENST00000301904 HECW2Q9P2P5 1572 aa11.83□□□□□ -0.52
SCARA3-201ENST00000301904 EBAG9O00559 213 aa11.83□□□□□ -0.52
SCARA3-201ENST00000301904 POLR2DO15514 142 aaKnown RBP11.83□□□□□ -0.52
SCARA3-201ENST00000301904 KIAA0754O94854 1291 aa11.83□□□□□ -0.52
SCARA3-201ENST00000301904 GBP2P32456 591 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms