RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 IL13P35225 146 aa10.48□□□□□ -0.73
MMP3-201ENST00000299855 DNAJC21Q5F1R6 531 aaKnown RBP10.48□□□□□ -0.73
MMP3-201ENST00000299855 C17orf53Q8N3J3 647 aaPredicted RBP10.48□□□□□ -0.73
MMP3-201ENST00000299855 FAM200AQ8TCP9 573 aa10.48□□□□□ -0.73
MMP3-201ENST00000299855 RNF34Q969K3 372 aa10.48□□□□□ -0.73
MMP3-201ENST00000299855 E2F7Q96AV8 911 aa10.48□□□□□ -0.73
MMP3-201ENST00000299855 VMP1Q96GC9 406 aa10.48□□□□□ -0.73
MMP3-201ENST00000299855 MAFBQ9Y5Q3 323 aaPredicted RBP10.48□□□□□ -0.73
MMP3-201ENST00000299855 CCDC61Q9Y6R9 512 aa10.48□□□□□ -0.73
MMP3-201ENST00000299855 NUTM2FA1L443 756 aa10.47□□□□□ -0.73
MMP3-201ENST00000299855 TSPAN6O43657 245 aa10.47□□□□□ -0.73
MMP3-201ENST00000299855 F13A1P00488 732 aa10.47□□□□□ -0.73
MMP3-201ENST00000299855 FANCCQ00597 558 aa10.47□□□□□ -0.73
MMP3-201ENST00000299855 RC3H1Q5TC82 1133 aaKnown RBP10.47□□□□□ -0.73
MMP3-201ENST00000299855 TMEM87BQ96K49 555 aa10.47□□□□□ -0.73
MMP3-201ENST00000299855 RNPC3Q96LT9 517 aaKnown RBP10.47□□□□□ -0.73
MMP3-201ENST00000299855 ASB16Q96NS5 453 aa10.47□□□□□ -0.73
MMP3-201ENST00000299855 PTPRHQ9HD43 1115 aa10.47□□□□□ -0.73
MMP3-201ENST00000299855 FAM53CQ9NYF3 392 aa10.47□□□□□ -0.73
MMP3-201ENST00000299855 AATKQ6ZMQ8 1374 aa10.47□□□□□ -0.73
MMP3-201ENST00000299855 CLK2P49760 499 aaKnown RBP10.46□□□□□ -0.73
MMP3-201ENST00000299855 GPSM2P81274 684 aa10.46□□□□□ -0.73
MMP3-201ENST00000299855 TERF2Q15554 542 aa10.46□□□□□ -0.73
MMP3-201ENST00000299855 MEX3CQ5U5Q3 659 aaKnown RBP10.46□□□□□ -0.73
MMP3-201ENST00000299855 POTEAQ6S8J7 498 aa10.46□□□□□ -0.73
MMP3-201ENST00000299855 NFXL1Q6ZNB6 911 aa10.46□□□□□ -0.73
MMP3-201ENST00000299855 BRSK2Q8IWQ3 736 aa10.46□□□□□ -0.73
MMP3-201ENST00000299855 ZNF496Q96IT1 587 aaPredicted RBP10.46□□□□□ -0.73
MMP3-201ENST00000299855 XPO4Q9C0E2 1151 aaKnown RBP10.46□□□□□ -0.73
MMP3-201ENST00000299855 DHX36Q9H2U1 1008 aaKnown RBP10.46□□□□□ -0.73
MMP3-201ENST00000299855 PALD1Q9ULE6 856 aa10.46□□□□□ -0.73
MMP3-201ENST00000299855 RABL2BQ9UNT1 228 aa10.46□□□□□ -0.73
MMP3-201ENST00000299855 CNPY2Q9Y2B0 182 aa10.46□□□□□ -0.73
MMP3-201ENST00000299855 NHSL1Q5SYE7 1610 aa10.46□□□□□ -0.73
MMP3-201ENST00000299855 C1orf167Q5SNV9 1468 aa10.46□□□□□ -0.73
MMP3-201ENST00000299855 CDK12Q9NYV4 1490 aaPredicted RBP10.46□□□□□ -0.73
MMP3-201ENST00000299855 LRP6O75581 1613 aa10.46□□□□□ -0.74
MMP3-201ENST00000299855 PRRT4C9JH25 899 aa10.46□□□□□ -0.74
MMP3-201ENST00000299855 AP5Z1O43299 807 aa10.46□□□□□ -0.74
MMP3-201ENST00000299855 CAVIN2O95810 425 aa10.46□□□□□ -0.74
MMP3-201ENST00000299855 CCT4P50991 539 aaKnown RBP10.46□□□□□ -0.74
MMP3-201ENST00000299855 SPECC1Q5M775 1068 aa10.46□□□□□ -0.74
MMP3-201ENST00000299855 MYSM1Q5VVJ2 828 aa10.46□□□□□ -0.74
MMP3-201ENST00000299855 KRT222Q8N1A0 295 aa10.46□□□□□ -0.74
MMP3-201ENST00000299855 THUMPD2Q9BTF0 503 aaKnown RBP10.46□□□□□ -0.74
MMP3-201ENST00000299855 LRRCC1Q9C099 1032 aa10.46□□□□□ -0.74
MMP3-201ENST00000299855 ANO2Q9NQ90 1003 aa10.46□□□□□ -0.74
MMP3-201ENST00000299855 COMMD8Q9NX08 183 aa10.46□□□□□ -0.74
MMP3-201ENST00000299855 CHCHD3Q9NX63 227 aaKnown RBP10.46□□□□□ -0.74
MMP3-201ENST00000299855 FAM177BA6PVY3 158 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 NEMFO60524 1076 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 TCEA3O75764 348 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 SYT1P21579 422 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 EXOSC10Q01780 885 aaKnown RBP10.45□□□□□ -0.74
MMP3-201ENST00000299855 DDB1Q16531 1140 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 NFE2Q16621 373 aaPredicted RBP10.45□□□□□ -0.74
MMP3-201ENST00000299855 WAPLQ7Z5K2 1190 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 SAMD14Q8IZD0 417 aaPredicted RBP10.45□□□□□ -0.74
MMP3-201ENST00000299855 CCDC112Q8NEF3 446 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 KIF18AQ8NI77 898 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 RPGRQ92834 1020 aaKnown RBP10.45□□□□□ -0.74
MMP3-201ENST00000299855 BEGAINQ9BUH8 593 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 LIMCH1Q9UPQ0 1083 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 CCDC171Q6TFL3 1326 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 YTHDC2Q9H6S0 1430 aaKnown RBP10.45□□□□□ -0.74
MMP3-201ENST00000299855 ATP7BP35670 1465 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 TNNT1P13805 278 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 MAPK1P28482 360 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 HOXC13P31276 330 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 SEC13P55735 322 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 WASHC4Q2M389 1173 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 SLFNL1Q499Z3 407 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 RNF20Q5VTR2 975 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 JAKMIP3Q5VZ66 844 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 ALKBH2Q6NS38 261 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 PLPP6Q8IY26 295 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 ZNF397Q8NF99 534 aaPredicted RBP10.45□□□□□ -0.74
MMP3-201ENST00000299855 LRRC59Q96AG4 307 aaKnown RBP10.45□□□□□ -0.74
MMP3-201ENST00000299855 AGAP3Q96P47 875 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 SERINC2Q96SA4 455 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 MEIS3Q99687 375 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 RIC8AQ9NPQ8 531 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 METTL5Q9NRN9 209 aaKnown RBP10.45□□□□□ -0.74
MMP3-201ENST00000299855 CALCOCO1Q9P1Z2 691 aa10.45□□□□□ -0.74
MMP3-201ENST00000299855 GTPBP10A4D1E9 387 aaKnown RBP10.44□□□□□ -0.74
MMP3-201ENST00000299855 NR1I2O75469 434 aa10.44□□□□□ -0.74
MMP3-201ENST00000299855 TRIM37O94972 964 aa10.44□□□□□ -0.74
MMP3-201ENST00000299855 HMOX1P09601 288 aa10.44□□□□□ -0.74
MMP3-201ENST00000299855 ZSCAN31Q96LW9 406 aaPredicted RBP10.44□□□□□ -0.74
MMP3-201ENST00000299855 NUCKS1Q9H1E3 243 aaKnown RBP10.44□□□□□ -0.74
MMP3-201ENST00000299855 ELP1O95163 1332 aa10.44□□□□□ -0.74
MMP3-201ENST00000299855 TECPR2O15040 1411 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 TMEM110-MUSTN1A8MSY1 372 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 GNAI2P04899 355 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 CDC25BP30305 580 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 HYIQ5T013 277 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 C11orf74Q86VG3 221 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 CLASRPQ8N2M8 674 aaKnown RBP10.43□□□□□ -0.74
MMP3-201ENST00000299855 PPHLN1Q8NEY8 458 aaKnown RBP10.43□□□□□ -0.74
MMP3-201ENST00000299855 SMCR8Q8TEV9 937 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms