RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 KRT23Q9C075 422 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 KIAA1468Q9P260 1216 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 LRP2BPQ9P2M1 347 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 IQSEC3Q9UPP2 1182 aaPredicted RBP10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 SLC12A7Q9Y666 1083 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 DLEC1Q9Y238 1755 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 UBE2Q2LH0YL09 131 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 KCNQ2O43526 872 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 WDHD1O75717 1129 aaPredicted RBP10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 ZNF202O95125 648 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 PFKFB1P16118 471 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 MARCKSP29966 332 aaPredicted RBP10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 SLC39A14Q15043 492 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 CCDC144BQ3MJ40 725 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 RRP12Q5JTH9 1297 aaKnown RBP10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 AOPEPQ8N6M6 819 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 STAG1Q8WVM7 1258 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 MRFAP1L1Q96HT8 127 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 NACAP1Q9BZK3 213 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 TOMM22Q9NS69 142 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 ZNF652Q9Y2D9 606 aa10.79□□□□□ -0.68
UBLCP1-201ENST00000296786 CMA1P23946 247 aa10.78□□□□□ -0.68
UBLCP1-201ENST00000296786 STK11IPQ8N1F8 1099 aa10.78□□□□□ -0.68
UBLCP1-201ENST00000296786 CDC5LQ99459 802 aaKnown RBP10.78□□□□□ -0.68
UBLCP1-201ENST00000296786 ZKSCAN3Q9BRR0 538 aa10.78□□□□□ -0.68
UBLCP1-201ENST00000296786 SLC26A6Q9BXS9 759 aa10.78□□□□□ -0.68
UBLCP1-201ENST00000296786 NAT10Q9H0A0 1025 aaKnown RBP10.78□□□□□ -0.68
UBLCP1-201ENST00000296786 FAM13BQ9NYF5 915 aa10.78□□□□□ -0.68
UBLCP1-201ENST00000296786 LAMB1P07942 1786 aa10.78□□□□□ -0.68
UBLCP1-201ENST00000296786 NID2Q14112 1375 aa10.78□□□□□ -0.68
UBLCP1-201ENST00000296786 STK36Q9NRP7 1315 aa10.78□□□□□ -0.68
UBLCP1-201ENST00000296786 COL1A1P02452 1464 aaPredicted RBP10.78□□□□□ -0.68
UBLCP1-201ENST00000296786 U2AF2P26368 475 aaKnown RBP eCLIP10.77□□□□□ -0.68
UBLCP1-201ENST00000296786 TRIM29Q14134 588 aa10.77□□□□□ -0.68
UBLCP1-201ENST00000296786 DPCR1Q3MIW9 517 aa10.77□□□□□ -0.68
UBLCP1-201ENST00000296786 ADGRA1Q86SQ6 560 aa10.77□□□□□ -0.68
UBLCP1-201ENST00000296786 CACTINQ8WUQ7 758 aaKnown RBP10.77□□□□□ -0.68
UBLCP1-201ENST00000296786 NUTM2BA6NNL0 878 aaPredicted RBP10.77□□□□□ -0.69
UBLCP1-201ENST00000296786 NUTM2EB1AL46 878 aaPredicted RBP10.77□□□□□ -0.69
UBLCP1-201ENST00000296786 SLC3A2P08195 630 aaKnown RBP10.77□□□□□ -0.69
UBLCP1-201ENST00000296786 SSRP1Q08945 709 aaKnown RBP10.77□□□□□ -0.69
UBLCP1-201ENST00000296786 PTPAQ15257 358 aa10.77□□□□□ -0.69
UBLCP1-201ENST00000296786 ZRSR1Q15695 479 aaKnown RBP10.77□□□□□ -0.69
UBLCP1-201ENST00000296786 ERFEQ4G0M1 354 aa10.77□□□□□ -0.69
UBLCP1-201ENST00000296786 NUTM2AQ8IVF1 878 aaPredicted RBP10.77□□□□□ -0.69
UBLCP1-201ENST00000296786 ABCF2Q9UG63 623 aa10.77□□□□□ -0.69
UBLCP1-201ENST00000296786 BAZ2BQ9UIF8 2168 aaKnown RBP10.77□□□□□ -0.69
UBLCP1-201ENST00000296786 ZNF804BA4D1E1 1349 aa10.77□□□□□ -0.69
UBLCP1-201ENST00000296786 DUOX1Q9NRD9 1551 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 WTIPA6NIX2 430 aaPredicted RBP10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 PPP6R2O75170 966 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 FMNL1O95466 1100 aaPredicted RBP10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 IFNAR1P17181 557 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 CYP7A1P22680 504 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 GYG1P46976 350 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 WTAPQ15007 396 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 SART3Q15020 963 aaKnown RBP10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 CLEC4GQ6UXB4 293 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 C3orf67Q6ZVT6 689 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 SDR42E1Q8WUS8 393 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 SMARCC1Q92922 1105 aaPredicted RBP10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 MAP3K14Q99558 947 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 BIN1O00499 593 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 GUCY1A2P33402 732 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 PPARAQ07869 468 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 BARGINQ6ZT62 677 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 ANKRD18AQ8IVF6 992 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 JMYQ8N9B5 988 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 COL24A1Q17RW2 1714 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 BTAF1O14981 1849 aa10.76□□□□□ -0.69
UBLCP1-201ENST00000296786 LTBP4Q8N2S1 1624 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 ERICH2A1L162 156 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 SYKP43405 635 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 RTN1Q16799 776 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 SHC4Q6S5L8 630 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 LINC00116Q8NCU8 138 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 BPIFA3Q9BQP9 254 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 PDCL3Q9H2J4 239 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 RNF41Q9H4P4 317 aaPredicted RBP10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 RAI14Q9P0K7 980 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 HPSEQ9Y251 543 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 MINDY4BA8MYZ0 360 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 GTF2F1P35269 517 aaKnown RBP eCLIP10.75□□□□□ -0.692e-6■□□□□ 10.8
UBLCP1-201ENST00000296786 KCNQ4P56696 695 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 NLRP12P59046 1061 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 LRRC8AQ8IWT6 810 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 CMTR1Q8N1G2 835 aaKnown RBP10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 CCDC82Q8N4S0 544 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 WASF1Q92558 559 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 CLIC6Q96NY7 704 aa10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 GNL3LQ9NVN8 582 aaKnown RBP10.75□□□□□ -0.69
UBLCP1-201ENST00000296786 MAST2Q6P0Q8 1798 aa10.74□□□□□ -0.69
UBLCP1-201ENST00000296786 MAGEB6P1A0A0J9YX57 407 aa10.74□□□□□ -0.69
UBLCP1-201ENST00000296786 MMP1P03956 469 aa10.74□□□□□ -0.69
UBLCP1-201ENST00000296786 RBM6P78332 1123 aaKnown RBP10.74□□□□□ -0.69
UBLCP1-201ENST00000296786 CHAF1AQ13111 956 aaPredicted RBP10.74□□□□□ -0.69
UBLCP1-201ENST00000296786 UBE4AQ14139 1066 aa10.74□□□□□ -0.69
UBLCP1-201ENST00000296786 ARID5BQ14865 1188 aa10.74□□□□□ -0.69
UBLCP1-201ENST00000296786 SF3B3Q15393 1217 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms