RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 MAP3K9P80192 1104 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 SLC9C2Q5TAH2 1124 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 ADGRA1Q86SQ6 560 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 CLMNQ96JQ2 1002 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 DDX4Q9NQI0 724 aaKnown RBP14.65□□□□□ -0.06
HMGB2-201ENST00000296503 WBP1LQ9NX94 342 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 UNCXA6NJT0 531 aa14.64□□□□□ -0.07
HMGB2-201ENST00000296503 IGHDP01880 384 aa14.64□□□□□ -0.07
HMGB2-201ENST00000296503 DYNLL1P63167 89 aaKnown RBP14.64□□□□□ -0.07
HMGB2-201ENST00000296503 MKRN3Q13064 507 aaKnown RBP14.64□□□□□ -0.07
HMGB2-201ENST00000296503 B4GALNT3Q6L9W6 998 aa14.64□□□□□ -0.07
HMGB2-201ENST00000296503 MIGA1Q8NAN2 632 aa14.64□□□□□ -0.07
HMGB2-201ENST00000296503 TSHZ3Q63HK5 1081 aa14.63□□□□□ -0.07
HMGB2-201ENST00000296503 TMED8Q6PL24 325 aaPredicted RBP14.63□□□□□ -0.07
HMGB2-201ENST00000296503 CSRNP1Q96S65 589 aa14.63□□□□□ -0.07
HMGB2-201ENST00000296503 ZNF341Q9BYN7 854 aa14.63□□□□□ -0.07
HMGB2-201ENST00000296503 TGFBRAP1Q8WUH2 860 aa14.63□□□□□ -0.07
HMGB2-201ENST00000296503 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.63□□□□□ -0.075e-67■□□□□ 9.1
HMGB2-201ENST00000296503 ELP3Q9H9T3 547 aa14.63□□□□□ -0.07
HMGB2-201ENST00000296503 CSADQ9Y600 493 aa14.63□□□□□ -0.07
HMGB2-201ENST00000296503 RPAP1Q9BWH6 1393 aaPredicted RBP14.62□□□□□ -0.07
HMGB2-201ENST00000296503 DDTLA6NHG4 134 aaPredicted RBP14.62□□□□□ -0.07
HMGB2-201ENST00000296503 ERC2O15083 957 aa14.62□□□□□ -0.07
HMGB2-201ENST00000296503 NPM3O75607 178 aaKnown RBP14.62□□□□□ -0.07
HMGB2-201ENST00000296503 PRKCSHP14314 528 aaPredicted RBP14.62□□□□□ -0.07
HMGB2-201ENST00000296503 PDE6AP16499 860 aa14.62□□□□□ -0.07
HMGB2-201ENST00000296503 SH3BP5LQ7L8J4 393 aa14.62□□□□□ -0.07
HMGB2-201ENST00000296503 OTUD7AQ8TE49 926 aaPredicted RBP14.62□□□□□ -0.07
HMGB2-201ENST00000296503 WRNIP1Q96S55 665 aa14.62□□□□□ -0.07
HMGB2-201ENST00000296503 ZNF532Q9HCE3 1301 aa14.62□□□□□ -0.07
HMGB2-201ENST00000296503 SPRYD7Q5W111 196 aa14.61□□□□□ -0.07
HMGB2-201ENST00000296503 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.61□□□□□ -0.07
HMGB2-201ENST00000296503 CERS3Q8IU89 383 aa14.61□□□□□ -0.07
HMGB2-201ENST00000296503 MAPKAPK5Q8IW41 473 aa14.61□□□□□ -0.07
HMGB2-201ENST00000296503 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.61□□□□□ -0.073e-18■■□□□ 13.6
HMGB2-201ENST00000296503 TTC41PQ6P2S7 1318 aa14.61□□□□□ -0.07
HMGB2-201ENST00000296503 MAGEB6P1A0A0J9YX57 407 aa14.61□□□□□ -0.07
HMGB2-201ENST00000296503 FOXN1O15353 648 aa14.61□□□□□ -0.07
HMGB2-201ENST00000296503 MX1P20591 662 aa14.61□□□□□ -0.07
HMGB2-201ENST00000296503 USP5P45974 858 aa14.61□□□□□ -0.07
HMGB2-201ENST00000296503 ZSCAN25Q6NSZ9 544 aa14.61□□□□□ -0.07
HMGB2-201ENST00000296503 SMC5Q8IY18 1101 aa14.61□□□□□ -0.07
HMGB2-201ENST00000296503 REM2Q8IYK8 340 aaPredicted RBP14.61□□□□□ -0.07
HMGB2-201ENST00000296503 ZKSCAN4Q969J2 545 aaPredicted RBP14.61□□□□□ -0.07
HMGB2-201ENST00000296503 LNPKQ9C0E8 428 aa14.61□□□□□ -0.07
HMGB2-201ENST00000296503 OSBPL5Q9H0X9 879 aaPredicted RBP14.61□□□□□ -0.07
HMGB2-201ENST00000296503 GLRX3O76003 335 aaKnown RBP14.6□□□□□ -0.07
HMGB2-201ENST00000296503 VGLL4Q14135 290 aa14.6□□□□□ -0.07
HMGB2-201ENST00000296503 WNK4Q96J92 1243 aa14.6□□□□□ -0.07
HMGB2-201ENST00000296503 IPO9Q96P70 1041 aaKnown RBP14.6□□□□□ -0.07
HMGB2-201ENST00000296503 PCNTO95613 3336 aa14.6□□□□□ -0.07
HMGB2-201ENST00000296503 ADD2P35612 726 aa14.59□□□□□ -0.07
HMGB2-201ENST00000296503 OPTNQ96CV9 577 aa14.59□□□□□ -0.07
HMGB2-201ENST00000296503 RFX7Q2KHR2 1363 aa14.59□□□□□ -0.07
HMGB2-201ENST00000296503 MAST2Q6P0Q8 1798 aa14.59□□□□□ -0.07
HMGB2-201ENST00000296503 ZBTB48P10074 688 aaPredicted RBP14.59□□□□□ -0.07
HMGB2-201ENST00000296503 INPP5BP32019 993 aa14.59□□□□□ -0.07
HMGB2-201ENST00000296503 CTCFP49711 727 aaPredicted RBP14.59□□□□□ -0.07
HMGB2-201ENST00000296503 SLFNL1Q499Z3 407 aa14.59□□□□□ -0.07
HMGB2-201ENST00000296503 DHX36Q9H2U1 1008 aaKnown RBP14.59□□□□□ -0.07
HMGB2-201ENST00000296503 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.59□□□□□ -0.07
HMGB2-201ENST00000296503 TCRBV5S4A2TA0A5A2 114 aa14.58□□□□□ -0.08
HMGB2-201ENST00000296503 SLURP2P0DP57 97 aa14.58□□□□□ -0.08
HMGB2-201ENST00000296503 SREBF2Q12772 1141 aa14.58□□□□□ -0.08
HMGB2-201ENST00000296503 CHD1LQ86WJ1 897 aa14.58□□□□□ -0.08
HMGB2-201ENST00000296503 KBTBD3Q8NAB2 608 aa14.58□□□□□ -0.08
HMGB2-201ENST00000296503 PI4K2BQ8TCG2 481 aa14.58□□□□□ -0.08
HMGB2-201ENST00000296503 RIOK1Q9BRS2 568 aaKnown RBP14.58□□□□□ -0.08
HMGB2-201ENST00000296503 CRNKL1Q9BZJ0 848 aaKnown RBP14.58□□□□□ -0.08
HMGB2-201ENST00000296503 PI4KBQ9UBF8 816 aa14.58□□□□□ -0.08
HMGB2-201ENST00000296503 SAP30BPQ9UHR5 308 aaKnown RBP14.58□□□□□ -0.08
HMGB2-201ENST00000296503 ZNF112Q9UJU3 913 aa14.58□□□□□ -0.08
HMGB2-201ENST00000296503 PALD1Q9ULE6 856 aa14.58□□□□□ -0.08
HMGB2-201ENST00000296503 FLT1P17948 1338 aa14.58□□□□□ -0.08
HMGB2-201ENST00000296503 DOCK2Q92608 1830 aa14.58□□□□□ -0.08
HMGB2-201ENST00000296503 MANSC4A6NHS7 340 aaPredicted RBP14.57□□□□□ -0.08
HMGB2-201ENST00000296503 CA12O43570 354 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 TRPA1O75762 1119 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 TM4SF4P48230 202 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 UBE3CQ15386 1083 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 CNKSR2Q8WXI2 1034 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 OTUD5Q96G74 571 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 TSKSQ9UJT2 592 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 TBC1D12O60347 775 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 CHGBP05060 677 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 GJA5P36382 358 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 LBX1P52954 281 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 PDE1AP54750 535 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 INHBEP58166 350 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 MAP3K10Q02779 954 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 NUCB1Q02818 461 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 SLC4A8Q2Y0W8 1093 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 ATRNL1Q5VV63 1379 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 ERO1BQ86YB8 467 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 TRIM34Q9BYJ4 488 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 ARMT1Q9H993 441 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 RNF186Q9NXI6 227 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 SNCAIPQ9Y6H5 919 aa14.57□□□□□ -0.08
HMGB2-201ENST00000296503 SALL3Q9BXA9 1300 aa14.56□□□□□ -0.08
HMGB2-201ENST00000296503 FAM196BA6NMK8 535 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms