RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 ZBTB22O15209 634 aa19.6■□□□□ 0.73
HIF3A-203ENST00000291300 IL1R1P14778 569 aa19.6■□□□□ 0.73
HIF3A-203ENST00000291300 WDR66Q8TBY9 1149 aa19.6■□□□□ 0.73
HIF3A-203ENST00000291300 CAMKK2Q96RR4 588 aa19.6■□□□□ 0.73
HIF3A-203ENST00000291300 PDGFDQ9GZP0 370 aaPredicted RBP19.6■□□□□ 0.73
HIF3A-203ENST00000291300 CNNM2Q9H8M5 875 aa19.6■□□□□ 0.73
HIF3A-203ENST00000291300 PARP3Q9Y6F1 533 aa19.6■□□□□ 0.73
HIF3A-203ENST00000291300 MBD3O95983 291 aa19.6■□□□□ 0.73
HIF3A-203ENST00000291300 NFXL1Q6ZNB6 911 aa19.6■□□□□ 0.73
HIF3A-203ENST00000291300 SP8Q8IXZ3 490 aa19.6■□□□□ 0.73
HIF3A-203ENST00000291300 AIFM3Q96NN9 605 aa19.6■□□□□ 0.73
HIF3A-203ENST00000291300 ATP6V0A2Q9Y487 856 aa19.6■□□□□ 0.73
HIF3A-203ENST00000291300 KIAA1551Q9HCM1 1747 aa19.59■□□□□ 0.73
HIF3A-203ENST00000291300 ILDR1Q86SU0 546 aaPredicted RBP19.59■□□□□ 0.73
HIF3A-203ENST00000291300 SGMS1Q86VZ5 419 aa19.59■□□□□ 0.73
HIF3A-203ENST00000291300 FLAD1Q8NFF5 587 aa19.59■□□□□ 0.73
HIF3A-203ENST00000291300 RGPD3A6NKT7 1758 aaPredicted RBP19.58■□□□□ 0.73
HIF3A-203ENST00000291300 METAP2P50579 478 aaKnown RBP eCLIP19.58■□□□□ 0.73
HIF3A-203ENST00000291300 RGPD4Q7Z3J3 1758 aa19.58■□□□□ 0.73
HIF3A-203ENST00000291300 SH3RF3Q8TEJ3 882 aaPredicted RBP19.58■□□□□ 0.73
HIF3A-203ENST00000291300 FTOQ9C0B1 505 aaKnown RBP eCLIP19.58■□□□□ 0.73
HIF3A-203ENST00000291300 SYCE3A1L190 88 aa19.58■□□□□ 0.72
HIF3A-203ENST00000291300 NPR1P16066 1061 aa19.58■□□□□ 0.72
HIF3A-203ENST00000291300 ZNF445P59923 1031 aa19.58■□□□□ 0.72
HIF3A-203ENST00000291300 SPTY2D1Q68D10 685 aaPredicted RBP19.58■□□□□ 0.72
HIF3A-203ENST00000291300 PHKBQ93100 1093 aa19.58■□□□□ 0.72
HIF3A-203ENST00000291300 GRPEL1Q9HAV7 217 aa19.58■□□□□ 0.72
HIF3A-203ENST00000291300 ORC3Q9UBD5 711 aaPredicted RBP19.58■□□□□ 0.72
HIF3A-203ENST00000291300 ZBTB43O43298 467 aa19.57■□□□□ 0.72
HIF3A-203ENST00000291300 RANBP6O60518 1105 aaKnown RBP19.57■□□□□ 0.72
HIF3A-203ENST00000291300 USP17L8P0C7I0 530 aa19.57■□□□□ 0.72
HIF3A-203ENST00000291300 PDIA4P13667 645 aaKnown RBP19.57■□□□□ 0.72
HIF3A-203ENST00000291300 LIFRP42702 1097 aa19.57■□□□□ 0.72
HIF3A-203ENST00000291300 KRT85P78386 507 aa19.57■□□□□ 0.72
HIF3A-203ENST00000291300 SLC15A2Q16348 729 aa19.57■□□□□ 0.72
HIF3A-203ENST00000291300 CRNKL1Q9BZJ0 848 aaKnown RBP19.57■□□□□ 0.72
HIF3A-203ENST00000291300 ECM29Q5VYK3 1845 aa19.57■□□□□ 0.72
HIF3A-203ENST00000291300 MYH15Q9Y2K3 1946 aa19.57■□□□□ 0.72
HIF3A-203ENST00000291300 CPLX1O14810 134 aa19.57■□□□□ 0.72
HIF3A-203ENST00000291300 HMGB2P26583 209 aaKnown RBP19.57■□□□□ 0.72
HIF3A-203ENST00000291300 UBE2HP62256 183 aa19.57■□□□□ 0.72
HIF3A-203ENST00000291300 NTRK3Q16288 839 aa19.57■□□□□ 0.72
HIF3A-203ENST00000291300 TAOK2Q9UL54 1235 aa19.57■□□□□ 0.72
HIF3A-203ENST00000291300 LAMB1P07942 1786 aa19.56■□□□□ 0.72
HIF3A-203ENST00000291300 RNF41Q9H4P4 317 aaPredicted RBP19.56■□□□□ 0.72
HIF3A-203ENST00000291300 MKRN1Q9UHC7 482 aaKnown RBP19.56■□□□□ 0.72
HIF3A-203ENST00000291300 GOLGA8AA7E2F4 631 aa19.55■□□□□ 0.72
HIF3A-203ENST00000291300 SEC23AQ15436 765 aa19.55■□□□□ 0.72
HIF3A-203ENST00000291300 L1TD1Q5T7N2 865 aaKnown RBP19.55■□□□□ 0.72
HIF3A-203ENST00000291300 GIMAP6Q6P9H5 292 aa19.55■□□□□ 0.72
HIF3A-203ENST00000291300 SLC12A7Q9Y666 1083 aa19.55■□□□□ 0.72
HIF3A-203ENST00000291300 PDE6BP35913 854 aa19.55■□□□□ 0.72
HIF3A-203ENST00000291300 WTAPQ15007 396 aa19.55■□□□□ 0.72
HIF3A-203ENST00000291300 CMTR1Q8N1G2 835 aaKnown RBP19.55■□□□□ 0.72
HIF3A-203ENST00000291300 LEO1Q8WVC0 666 aaPredicted RBP19.55■□□□□ 0.72
HIF3A-203ENST00000291300 ZNF622Q969S3 477 aaKnown RBP eCLIP19.55■□□□□ 0.72
HIF3A-203ENST00000291300 MXD3Q9BW11 206 aa19.55■□□□□ 0.72
HIF3A-203ENST00000291300 RTFDC1Q9BY42 306 aaPredicted RBP19.55■□□□□ 0.72
HIF3A-203ENST00000291300 ATP8A2Q9NTI2 1148 aa19.55■□□□□ 0.72
HIF3A-203ENST00000291300 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.55■□□□□ 0.72
HIF3A-203ENST00000291300 TNKSO95271 1327 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 CCDC69A6NI79 296 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 DHX16O60231 1041 aaKnown RBP19.54■□□□□ 0.72
HIF3A-203ENST00000291300 FGRP09769 529 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 CHRNA5P30532 468 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 CEBPZQ03701 1054 aaKnown RBP19.54■□□□□ 0.72
HIF3A-203ENST00000291300 MFSD14BQ5SR56 506 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 MASTLQ96GX5 879 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 CDK5RAP2Q96SN8 1893 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 NMT2O60551 498 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 MRE11P49959 708 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 GTF2IP78347 998 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 DOK7Q18PE1 504 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 DEFB132Q7Z7B7 95 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 MPNDQ8N594 471 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 ENAHQ8N8S7 591 aaPredicted RBP19.54■□□□□ 0.72
HIF3A-203ENST00000291300 ESR2Q92731 530 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 MCM9Q9NXL9 1143 aa19.54■□□□□ 0.72
HIF3A-203ENST00000291300 MROH7-TTC4A0A0A0MT08 1334 aa19.53■□□□□ 0.72
HIF3A-203ENST00000291300 FAM47AQ5JRC9 791 aa19.53■□□□□ 0.72
HIF3A-203ENST00000291300 C2CD5Q86YS7 1000 aa19.53■□□□□ 0.72
HIF3A-203ENST00000291300 C8orf76Q96K31 380 aa19.53■□□□□ 0.72
HIF3A-203ENST00000291300 ZSCAN16Q9H4T2 348 aaPredicted RBP19.53■□□□□ 0.72
HIF3A-203ENST00000291300 SLX4Q8IY92 1834 aa19.53■□□□□ 0.72
HIF3A-203ENST00000291300 KIF28PB7ZC32 967 aa19.52■□□□□ 0.72
HIF3A-203ENST00000291300 TMC4Q7Z404 712 aa19.52■□□□□ 0.72
HIF3A-203ENST00000291300 TGFBRAP1Q8WUH2 860 aa19.52■□□□□ 0.72
HIF3A-203ENST00000291300 DYNLL2Q96FJ2 89 aa19.52■□□□□ 0.72
HIF3A-203ENST00000291300 PGBD1Q96JS3 809 aa19.52■□□□□ 0.72
HIF3A-203ENST00000291300 SPATA32Q96LK8 384 aa19.52■□□□□ 0.72
HIF3A-203ENST00000291300 ZNF219Q9P2Y4 722 aaPredicted RBP19.52■□□□□ 0.72
HIF3A-203ENST00000291300 KIF3AQ9Y496 699 aa19.52■□□□□ 0.72
HIF3A-203ENST00000291300 CERS5Q8N5B7 392 aa19.52■□□□□ 0.72
HIF3A-203ENST00000291300 FBXO18Q8NFZ0 1043 aa19.52■□□□□ 0.72
HIF3A-203ENST00000291300 UBAC1Q9BSL1 405 aa19.52■□□□□ 0.72
HIF3A-203ENST00000291300 RBSNQ9H1K0 784 aa19.52■□□□□ 0.72
HIF3A-203ENST00000291300 LIG1P18858 919 aa19.51■□□□□ 0.71
HIF3A-203ENST00000291300 ALDH1B1P30837 517 aa19.51■□□□□ 0.71
HIF3A-203ENST00000291300 GUCY1A2P33402 732 aa19.51■□□□□ 0.71
HIF3A-203ENST00000291300 BTDP43251 543 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms