RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ALDH8A1Q9H2A2 487 aaPredicted RBP10□□□□□ -0.81
PTPDC1-201ENST00000288976 EPB41L4AQ9HCS5 686 aaPredicted RBP10□□□□□ -0.81
PTPDC1-201ENST00000288976 JAG2Q9Y219 1238 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 CHGBP05060 677 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 APOBEC3HQ6NTF7 200 aaKnown RBP10□□□□□ -0.81
PTPDC1-201ENST00000288976 AATFQ9NY61 560 aaKnown RBP eCLIP10□□□□□ -0.81
PTPDC1-201ENST00000288976 DIXDC1Q155Q3 683 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 OGFOD1Q8N543 542 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 ATRNL1Q5VV63 1379 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 SPDYE2BA6NHP3 402 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 RAD17O75943 681 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 HMGB1P09429 215 aaKnown RBP9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 FGRP09769 529 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 SPDYE6P0CI01 402 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 PSMA5P28066 241 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 MIGA1Q8NAN2 632 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 GREB1LQ9C091 1923 aaPredicted RBP9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 IKQ13123 557 aaPredicted RBP9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 GPR162Q16538 588 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 AMOTL1Q8IY63 956 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 SH3RF3Q8TEJ3 882 aaPredicted RBP9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 CHMP4CQ96CF2 233 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 DYNLL1P63167 89 aaKnown RBP9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 CFAP100Q494V2 611 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 SLFNL1Q499Z3 407 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 MTA3Q9BTC8 594 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 MXD3Q9BW11 206 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 RNF181Q9P0P0 153 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 SNX14Q9Y5W7 946 aa9.99□□□□□ -0.81
PTPDC1-201ENST00000288976 ENTPD3O75355 529 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 SPDYE2Q495Y8 402 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 NAPBQ9H115 298 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 DCP1AQ9NPI6 582 aaPredicted RBP9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 FLT1P17948 1338 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 FGAP02671 866 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 C9orf131Q5VYM1 1079 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 FBXL16Q8N461 479 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 STAG1Q8WVM7 1258 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 KIF2CQ99661 725 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 CDC42EP5Q6NZY7 148 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 KIAA0825Q8IV33 1275 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 TEX11Q8IYF3 940 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 EHD4Q9H223 541 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 RNF41Q9H4P4 317 aaPredicted RBP9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 CNNM2Q9H8M5 875 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 MYOZ2Q9NPC6 264 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 PITPNM2Q9BZ72 1349 aa9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 BAZ2AQ9UIF9 1905 aaKnown RBP9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 MYCNP04198 464 aaPredicted RBP9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 SLC3A2P08195 630 aaKnown RBP9.98□□□□□ -0.81
PTPDC1-201ENST00000288976 MYH8P13535 1937 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 GMPSP49915 693 aaPredicted RBP9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 DHX36Q9H2U1 1008 aaKnown RBP9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 ZNF213O14771 459 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 MYO1BO43795 1136 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 TDO2P48775 406 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 DLGAP5Q15398 846 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 SNX21Q969T3 373 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 PPP2R3BQ9Y5P8 575 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 PAPPA2Q9BXP8 1791 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 USP5P45974 858 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 PPARAQ07869 468 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 CTR9Q6PD62 1173 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 TRIM44Q96DX7 344 aaPredicted RBP9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 USP40Q9NVE5 1235 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 GPRC5DQ9NZD1 345 aa9.97□□□□□ -0.81
PTPDC1-201ENST00000288976 WDHD1O75717 1129 aaPredicted RBP9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 CYP21A2P08686 494 aa9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 FOXD4L6Q3SYB3 417 aaPredicted RBP9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 FOXD4L3Q6VB84 417 aaPredicted RBP9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 FAM83AQ86UY5 434 aa9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 ORC4O43929 436 aa9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 SCNN1DP51172 638 aa9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 KRT23Q9C075 422 aa9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 OSBPL5Q9H0X9 879 aaPredicted RBP9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 ZNF287Q9HBT7 754 aa9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 TMOD2Q9NZR1 351 aa9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 SWAP70Q9UH65 585 aa9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 PLIN4Q96Q06 1357 aa9.96□□□□□ -0.81
PTPDC1-201ENST00000288976 F8W031 263 aaPredicted RBP9.96□□□□□ -0.82
PTPDC1-201ENST00000288976 PRKAB2O43741 272 aa9.96□□□□□ -0.82
PTPDC1-201ENST00000288976 MCM2P49736 904 aa9.96□□□□□ -0.82
PTPDC1-201ENST00000288976 MICALL2Q8IY33 904 aa9.96□□□□□ -0.82
PTPDC1-201ENST00000288976 ATP2B2Q01814 1243 aa9.96□□□□□ -0.82
PTPDC1-201ENST00000288976 C12orf60Q5U649 245 aa9.96□□□□□ -0.82
PTPDC1-201ENST00000288976 METTL16Q86W50 562 aaKnown RBP9.96□□□□□ -0.82
PTPDC1-201ENST00000288976 NBPF3Q9H094 633 aa9.96□□□□□ -0.82
PTPDC1-201ENST00000288976 PALD1Q9ULE6 856 aa9.96□□□□□ -0.82
PTPDC1-201ENST00000288976 LMOD1P29536 600 aaPredicted RBP9.95□□□□□ -0.82
PTPDC1-201ENST00000288976 RBM5P52756 815 aaKnown RBP eCLIP9.95□□□□□ -0.82
PTPDC1-201ENST00000288976 FOXD4L5Q5VV16 416 aaPredicted RBP9.95□□□□□ -0.82
PTPDC1-201ENST00000288976 DPY19L2Q6NUT2 758 aa9.95□□□□□ -0.82
PTPDC1-201ENST00000288976 FOXD4L4Q8WXT5 416 aaPredicted RBP9.95□□□□□ -0.82
PTPDC1-201ENST00000288976 ADARB2Q9NS39 739 aaKnown RBP9.95□□□□□ -0.82
PTPDC1-201ENST00000288976 ZNF70Q9UC06 446 aaPredicted RBP9.95□□□□□ -0.82
PTPDC1-201ENST00000288976 E7EWF7 191 aa9.95□□□□□ -0.82
PTPDC1-201ENST00000288976 H7C1D1 291 aa9.95□□□□□ -0.82
PTPDC1-201ENST00000288976 TNFAIP1Q13829 316 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms