RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CCT6AP40227 531 aaKnown RBP18.21■□□□□ 0.51
SMAD6-201ENST00000288840 DDB1Q16531 1140 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 FAM47AQ5JRC9 791 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 GPR108Q9NPR9 543 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 ANKIB1Q9P2G1 1089 aa18.21■□□□□ 0.51
SMAD6-201ENST00000288840 AKNAD1Q5T1N1 836 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 ANKRD18AQ8IVF6 992 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 AMOTL1Q8IY63 956 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 DACH1Q9UI36 760 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 CIAO1O76071 339 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 LONRF3Q496Y0 759 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 PLA2G4DQ86XP0 818 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 FMR1NBQ8N0W7 255 aaPredicted RBP18.2■□□□□ 0.5
SMAD6-201ENST00000288840 CCDC12Q8WUD4 166 aaPredicted RBP18.2■□□□□ 0.5
SMAD6-201ENST00000288840 MRFAP1L1Q96HT8 127 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 TRIM75PA6NK02 468 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 G3V3G9 751 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 WDHD1O75717 1129 aaPredicted RBP18.2■□□□□ 0.5
SMAD6-201ENST00000288840 RASGRF1Q13972 1273 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 DCAF8Q5TAQ9 597 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 DZIP1Q86YF9 867 aaKnown RBP18.2■□□□□ 0.5
SMAD6-201ENST00000288840 LCORLQ8N3X6 602 aa18.2■□□□□ 0.5
SMAD6-201ENST00000288840 CASQ1P31415 396 aa18.19■□□□□ 0.5
SMAD6-201ENST00000288840 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
SMAD6-201ENST00000288840 IQCB1Q15051 598 aa18.19■□□□□ 0.5
SMAD6-201ENST00000288840 SMYD4Q8IYR2 804 aaPredicted RBP18.19■□□□□ 0.5
SMAD6-201ENST00000288840 TMEM87BQ96K49 555 aa18.19■□□□□ 0.5
SMAD6-201ENST00000288840 CEP131Q9UPN4 1083 aa18.19■□□□□ 0.5
SMAD6-201ENST00000288840 NEDD4P46934 1319 aa18.19■□□□□ 0.5
SMAD6-201ENST00000288840 CNNM2Q9H8M5 875 aa18.19■□□□□ 0.5
SMAD6-201ENST00000288840 ATG3Q9NT62 314 aa18.19■□□□□ 0.5
SMAD6-201ENST00000288840 PATL2C9JE40 543 aaKnown RBP18.19■□□□□ 0.5
SMAD6-201ENST00000288840 CMA1P23946 247 aa18.19■□□□□ 0.5
SMAD6-201ENST00000288840 ANTXR2P58335 489 aa18.19■□□□□ 0.5
SMAD6-201ENST00000288840 TMCO3Q6UWJ1 677 aa18.19■□□□□ 0.5
SMAD6-201ENST00000288840 CDC5LQ99459 802 aaKnown RBP18.19■□□□□ 0.5
SMAD6-201ENST00000288840 SLC39A14Q15043 492 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 KIF4BQ2VIQ3 1234 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 BLZF1Q9H2G9 400 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 AATFQ9NY61 560 aaKnown RBP eCLIP18.18■□□□□ 0.5
SMAD6-201ENST00000288840 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 ERCC3P19447 782 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 MB21D2Q8IYB1 491 aaPredicted RBP18.18■□□□□ 0.5
SMAD6-201ENST00000288840 CARD10Q9BWT7 1032 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 SPTLC3Q9NUV7 552 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 ZMYM6O95789 1325 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 ZSCAN12O43309 604 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 CDC25AP30304 524 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 GUCY1A2P33402 732 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 TXLNAP40222 546 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 DHX40Q8IX18 779 aaKnown RBP18.18■□□□□ 0.5
SMAD6-201ENST00000288840 NUP88Q99567 741 aaPredicted RBP18.18■□□□□ 0.5
SMAD6-201ENST00000288840 CARD6Q9BX69 1037 aa18.18■□□□□ 0.5
SMAD6-201ENST00000288840 N4BP3O15049 544 aa18.17■□□□□ 0.5
SMAD6-201ENST00000288840 RRAGBQ5VZM2 374 aa18.17■□□□□ 0.5
SMAD6-201ENST00000288840 ZNF335Q9H4Z2 1342 aaPredicted RBP18.17■□□□□ 0.5
SMAD6-201ENST00000288840 IPO7O95373 1038 aaKnown RBP18.17■□□□□ 0.5
SMAD6-201ENST00000288840 DYNLL1P63167 89 aaKnown RBP18.17■□□□□ 0.5
SMAD6-201ENST00000288840 ZNF710Q8N1W2 664 aa18.17■□□□□ 0.5
SMAD6-201ENST00000288840 UIMC1Q96RL1 719 aa18.17■□□□□ 0.5
SMAD6-201ENST00000288840 PIK3C2AO00443 1686 aa18.17■□□□□ 0.5
SMAD6-201ENST00000288840 CCP110O43303 1012 aa18.17■□□□□ 0.5
SMAD6-201ENST00000288840 NOSTRINQ8IVI9 506 aa18.17■□□□□ 0.5
SMAD6-201ENST00000288840 ZNF654Q8IZM8 581 aa18.17■□□□□ 0.5
SMAD6-201ENST00000288840 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
SMAD6-201ENST00000288840 PUF60Q9UHX1 559 aaKnown RBP18.17■□□□□ 0.5
SMAD6-201ENST00000288840 KIF2AO00139 706 aaPredicted RBP18.16■□□□□ 0.5
SMAD6-201ENST00000288840 CASP7P55210 303 aa18.16■□□□□ 0.5
SMAD6-201ENST00000288840 FAM182BQ5T319 152 aa18.16■□□□□ 0.5
SMAD6-201ENST00000288840 ZFP91Q96JP5 570 aaPredicted RBP18.16■□□□□ 0.5
SMAD6-201ENST00000288840 ISCA1Q9BUE6 129 aa18.16■□□□□ 0.5
SMAD6-201ENST00000288840 TMEM232C9JQI7 657 aa18.16■□□□□ 0.5
SMAD6-201ENST00000288840 SSBP05455 408 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMAD6-201ENST00000288840 NAP1L1P55209 391 aaKnown RBP18.16■□□□□ 0.5
SMAD6-201ENST00000288840 SUSD4Q5VX71 490 aa18.16■□□□□ 0.5
SMAD6-201ENST00000288840 DHX37Q8IY37 1157 aaKnown RBP18.16■□□□□ 0.5
SMAD6-201ENST00000288840 MCM9Q9NXL9 1143 aa18.16■□□□□ 0.5
SMAD6-201ENST00000288840 USP17L12C9JPN9 530 aa18.16■□□□□ 0.5
SMAD6-201ENST00000288840 USP17L21D6R901 530 aa18.16■□□□□ 0.5
SMAD6-201ENST00000288840 SH2B2O14492 632 aaPredicted RBP18.16■□□□□ 0.5
SMAD6-201ENST00000288840 PIK3AP1Q6ZUJ8 805 aa18.16■□□□□ 0.5
SMAD6-201ENST00000288840 VPS16Q9H269 839 aa18.16■□□□□ 0.5
SMAD6-201ENST00000288840 PCDHB6Q9Y5E3 794 aa18.16■□□□□ 0.5
SMAD6-201ENST00000288840 NCBP1Q09161 790 aaKnown RBP18.15■□□□□ 0.5
SMAD6-201ENST00000288840 POSTNQ15063 836 aa18.15■□□□□ 0.5
SMAD6-201ENST00000288840 STRBPQ96SI9 672 aaKnown RBP18.15■□□□□ 0.5
SMAD6-201ENST00000288840 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
SMAD6-201ENST00000288840 BAG1Q99933 345 aaPredicted RBP18.15■□□□□ 0.5
SMAD6-201ENST00000288840 BAZ2BQ9UIF8 2168 aaKnown RBP18.15■□□□□ 0.5
SMAD6-201ENST00000288840 TNKSO95271 1327 aa18.15■□□□□ 0.5
SMAD6-201ENST00000288840 A0A1W2PQ27 194 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 A0A1W2PQ64 194 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 A0A1W2PQD8 194 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 NBPF5PQ86XG9 351 aaPredicted RBP18.14■□□□□ 0.49
SMAD6-201ENST00000288840 FANCBQ8NB91 859 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 DPF2Q92785 391 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.14■□□□□ 0.49
SMAD6-201ENST00000288840 CUTAO60888 179 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 CHRNDQ07001 517 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 ZHX3Q9H4I2 956 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms