RNA–Protein interactions for RNA: ENST00000288135.5

KIT-201, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIT, Length 5,186 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-201ENST00000288135 CCDC194A0A1B0GVG4 234 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 ALDH1B1P30837 517 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 TOB2Q14106 344 aaPredicted RBP9.25□□□□□ -0.93
KIT-201ENST00000288135 FNBP4Q8N3X1 1017 aaPredicted RBP9.25□□□□□ -0.93
KIT-201ENST00000288135 ZNF592Q92610 1267 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 PLIN2Q99541 437 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 FEZ1Q99689 392 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 CABP5Q9NP86 173 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 TNKSO95271 1327 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 CLRN2A0PK11 232 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 PSDA5PKW4 1024 aaPredicted RBP9.25□□□□□ -0.93
KIT-201ENST00000288135 NRDCO43847 1150 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 NMT2O60551 498 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 SLC51AQ86UW1 340 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 NOC3LQ8WTT2 800 aaKnown RBP9.25□□□□□ -0.93
KIT-201ENST00000288135 PLA2G12BQ9BX93 195 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 SCAF8Q9UPN6 1271 aaKnown RBP9.25□□□□□ -0.93
KIT-201ENST00000288135 TNS2Q63HR2 1409 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 JDP2Q8WYK2 163 aa9.25□□□□□ -0.93
KIT-201ENST00000288135 FAM196BA6NMK8 535 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 ATP2B4P23634 1241 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 FILIP1Q7Z7B0 1213 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 TCEAL9Q9UHQ7 104 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 KIF5BP33176 963 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 FAM13BQ9NYF5 915 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 A0A087WWV3 80 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 CYB5R4Q7L1T6 521 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 ZNF654Q8IZM8 581 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 TMEM63CQ9P1W3 806 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 NEDD4P46934 1319 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 CDK5RAP3Q96JB5 506 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 PCMTD1Q96MG8 357 aaPredicted RBP9.24□□□□□ -0.93
KIT-201ENST00000288135 CPVLQ9H3G5 476 aa9.24□□□□□ -0.93
KIT-201ENST00000288135 CARMIL3Q8ND23 1372 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 USP42Q9H9J4 1324 aaKnown RBP9.23□□□□□ -0.93
KIT-201ENST00000288135 TCP10L2B9ZVM9 353 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 AFMP43652 599 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 KRT40Q6A162 431 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 LRRC47Q8N1G4 583 aaKnown RBP9.23□□□□□ -0.93
KIT-201ENST00000288135 TMTC2Q8N394 836 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 TMEM87BQ96K49 555 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 ZSCAN16Q9H4T2 348 aaPredicted RBP9.23□□□□□ -0.93
KIT-201ENST00000288135 HOOK1Q9UJC3 728 aaKnown RBP9.23□□□□□ -0.93
KIT-201ENST00000288135 GYS1P13807 737 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 ZNF174Q15697 407 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 COL23A1Q86Y22 540 aaPredicted RBP9.23□□□□□ -0.93
KIT-201ENST00000288135 SH3RF3Q8TEJ3 882 aaPredicted RBP9.23□□□□□ -0.93
KIT-201ENST00000288135 BBOX1O75936 387 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 HMGB2P26583 209 aaKnown RBP9.23□□□□□ -0.93
KIT-201ENST00000288135 MCM7P33993 719 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 GPT2Q8TD30 523 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 LEMD3Q9Y2U8 911 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 ABCC12Q96J65 1359 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 USP17L3A6NCW0 530 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 USP17L4A6NCW7 530 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 SPTLC2O15270 562 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 NAPAP54920 295 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 USP17L1Q7RTZ2 530 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 AMIGO3Q86WK7 504 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 DIS3L2Q8IYB7 885 aaKnown RBP9.23□□□□□ -0.93
KIT-201ENST00000288135 CNNM3Q8NE01 707 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 ZNF830Q96NB3 372 aaPredicted RBP9.23□□□□□ -0.93
KIT-201ENST00000288135 SENP2Q9HC62 589 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 CD209Q9NNX6 404 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 RGPD5Q99666 1765 aa9.23□□□□□ -0.93
KIT-201ENST00000288135 TTC14Q96N46 770 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 ZDHHC9Q9Y397 364 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 FRMPD2Q68DX3 1309 aaPredicted RBP9.22□□□□□ -0.93
KIT-201ENST00000288135 PFKFB2O60825 505 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 LETM1O95202 739 aaPredicted RBP9.22□□□□□ -0.93
KIT-201ENST00000288135 ZNF76P36508 570 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 CUL4AQ13619 759 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 TTLL12Q14166 644 aaPredicted RBP9.22□□□□□ -0.93
KIT-201ENST00000288135 RC3H1Q5TC82 1133 aaKnown RBP9.22□□□□□ -0.93
KIT-201ENST00000288135 APOA5Q6Q788 366 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 GPKOWQ92917 476 aaPredicted RBP eCLIP9.22□□□□□ -0.93
KIT-201ENST00000288135 USP28Q96RU2 1077 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 UBA5Q9GZZ9 404 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 DNAJC25Q9H1X3 360 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 GAS2L3Q86XJ1 694 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 NSUN7Q8NE18 718 aaKnown RBP9.22□□□□□ -0.93
KIT-201ENST00000288135 LEO1Q8WVC0 666 aaPredicted RBP9.22□□□□□ -0.93
KIT-201ENST00000288135 CLIP2Q9UDT6 1046 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 GSG1L2A8MUP6 293 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 LIG1P18858 919 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 TXLNAP40222 546 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 SF3B3Q15393 1217 aaKnown RBP9.22□□□□□ -0.93
KIT-201ENST00000288135 TTC6Q86TZ1 520 aa9.22□□□□□ -0.93
KIT-201ENST00000288135 ZSCAN10Q96SZ4 725 aaPredicted RBP9.22□□□□□ -0.93
KIT-201ENST00000288135 BTBD18B2RXH4 712 aa9.21□□□□□ -0.93
KIT-201ENST00000288135 SMIM22K7EJ46 135 aa9.21□□□□□ -0.93
KIT-201ENST00000288135 PLCG2P16885 1265 aa9.21□□□□□ -0.93
KIT-201ENST00000288135 AOC3Q16853 763 aa9.21□□□□□ -0.93
KIT-201ENST00000288135 SLC27A3Q5K4L6 730 aa9.21□□□□□ -0.93
KIT-201ENST00000288135 ZNF142P52746 1687 aaPredicted RBP9.21□□□□□ -0.93
KIT-201ENST00000288135 CNTNAP4Q9C0A0 1308 aa9.21□□□□□ -0.93
KIT-201ENST00000288135 SERPINC1P01008 464 aa9.21□□□□□ -0.93
KIT-201ENST00000288135 PIK3AP1Q6ZUJ8 805 aa9.21□□□□□ -0.93
KIT-201ENST00000288135 FLAD1Q8NFF5 587 aa9.21□□□□□ -0.93
KIT-201ENST00000288135 TEKT1Q969V4 418 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms