RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 PPP2R5BQ15173 497 aa13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 AXDND1Q5T1B0 1012 aaPredicted RBP13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 OTUD7BQ6GQQ9 843 aa13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 ELOA2Q8IYF1 753 aaPredicted RBP13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 IFIT3O14879 490 aaKnown RBP13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 CUTAO60888 179 aa13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 FMNL1O95466 1100 aaPredicted RBP13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 IFNAR1P17181 557 aa13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 SYKP43405 635 aa13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 KCND1Q9NSA2 647 aa13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
SIRPB1-202ENST00000279477 PPFIA3O75145 1194 aa13.18□□□□□ -0.3
SIRPB1-202ENST00000279477 TDO2P48775 406 aa13.18□□□□□ -0.3
SIRPB1-202ENST00000279477 CACTINQ8WUQ7 758 aaKnown RBP13.18□□□□□ -0.3
SIRPB1-202ENST00000279477 OSBPL5Q9H0X9 879 aaPredicted RBP13.18□□□□□ -0.3
SIRPB1-202ENST00000279477 NRBP1Q9UHY1 535 aa13.18□□□□□ -0.3
SIRPB1-202ENST00000279477 RGL2O15211 777 aa13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 LRMPQ12912 555 aa13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 NTRK3Q16288 839 aa13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 TPD52L1Q16890 204 aaPredicted RBP13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 SUSD4Q5VX71 490 aa13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 EPB41L4AQ9HCS5 686 aaPredicted RBP13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 GNL3LQ9NVN8 582 aaKnown RBP13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 HPSEQ9Y251 543 aa13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 KCNJ6P48051 423 aa13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 WTAPQ15007 396 aa13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 CCDC144BQ3MJ40 725 aa13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 CCDC144CPQ8IYA2 1237 aa13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 SMARCC1Q92922 1105 aaPredicted RBP13.17□□□□□ -0.3
SIRPB1-202ENST00000279477 CTIFO43310 598 aaKnown RBP13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 CBFA2T2O43439 604 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 CAMTA2O94983 1202 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 PCP11498 1178 aaKnown RBP13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 TNNT1P13805 278 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 CDC27P30260 824 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 DDB1Q16531 1140 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 RTN1Q16799 776 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 DPCR1Q3MIW9 517 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 RESP18Q5W5W9 173 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 INTS5Q6P9B9 1019 aaKnown RBP13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 RAB11FIP4Q86YS3 637 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 TUBE1Q9UJT0 475 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 MROH7-TTC4A0A0A0MT08 1334 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 SCN7AQ01118 1682 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 GSG1L2A8MUP6 293 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 RIOK3O14730 519 aaKnown RBP13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 DEXIO95424 95 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 NTSR2O95665 410 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 TUBB4AP04350 444 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 PTPAQ15257 358 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 SLC26A6Q9BXS9 759 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 FOXP1Q9H334 677 aaPredicted RBP13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 ARMT1Q9H993 441 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 ZSWIM5Q9P217 1185 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 SLC4A4Q9Y6R1 1079 aa13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 MORC2Q9Y6X9 1032 aaPredicted RBP13.16□□□□□ -0.3
SIRPB1-202ENST00000279477 MYH6P13533 1939 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 CCP110O43303 1012 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 MMP1P03956 469 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 SKILP12757 684 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 RILPL1Q5EBL4 403 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 SPATA31A1Q5TZJ5 1347 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 CASZ1Q86V15 1759 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 NOSTRINQ8IVI9 506 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 KRI1Q8N9T8 703 aaKnown RBP13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 HELBQ8NG08 1087 aaPredicted RBP13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 CCDC34Q96HJ3 373 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 C16orf45Q96MC5 204 aaPredicted RBP13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 MAP3K14Q99558 947 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 LRP2BPQ9P2M1 347 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 DLEC1Q9Y238 1755 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 MAST2Q6P0Q8 1798 aa13.15□□□□□ -0.3
SIRPB1-202ENST00000279477 ZNF804BA4D1E1 1349 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 LOC102724428A0A0B4J2F2 783 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 RANBP6O60518 1105 aaKnown RBP13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 XBP1P17861 261 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 SIK1P57059 783 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 OLFM4Q6UX06 510 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 CLEC4GQ6UXB4 293 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 CCDC112Q8NEF3 446 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 PHKBQ93100 1093 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 UBAC1Q9BSL1 405 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 DACH1Q9UI36 760 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 ANAPC4Q9UJX5 808 aa13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 NIP7Q9Y221 180 aaKnown RBP eCLIP13.15□□□□□ -0.31
SIRPB1-202ENST00000279477 WDHD1O75717 1129 aaPredicted RBP13.14□□□□□ -0.31
SIRPB1-202ENST00000279477 SMC2O95347 1197 aa13.14□□□□□ -0.31
SIRPB1-202ENST00000279477 MYL5Q02045 173 aa13.14□□□□□ -0.31
SIRPB1-202ENST00000279477 ESR2Q92731 530 aa13.14□□□□□ -0.31
SIRPB1-202ENST00000279477 BCL2L12Q9HB09 334 aa13.14□□□□□ -0.31
SIRPB1-202ENST00000279477 FAM217BQ9NTX9 383 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms