RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 UBAC1Q9BSL1 405 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 ALG1Q9BT22 464 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 KRT23Q9C075 422 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 NUP62CLQ9H1M0 184 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 ANO8Q9HCE9 1232 aaPredicted RBP20.94■□□□□ 0.94
CAPN1-201ENST00000279247 BAZ2AQ9UIF9 1905 aaKnown RBP20.94■□□□□ 0.94
CAPN1-201ENST00000279247 CCDC173Q0VFZ6 552 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 SYNE3Q6ZMZ3 975 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 ZMYM6O95789 1325 aa20.93■□□□□ 0.94
CAPN1-201ENST00000279247 ST5P78524 1137 aa20.93■□□□□ 0.94
CAPN1-201ENST00000279247 GNL2Q13823 731 aaKnown RBP20.93■□□□□ 0.94
CAPN1-201ENST00000279247 DIXDC1Q155Q3 683 aa20.93■□□□□ 0.94
CAPN1-201ENST00000279247 CNNM2Q9H8M5 875 aa20.93■□□□□ 0.94
CAPN1-201ENST00000279247 UFL1O94874 794 aa20.93■□□□□ 0.94
CAPN1-201ENST00000279247 GRIK5Q16478 980 aa20.93■□□□□ 0.94
CAPN1-201ENST00000279247 FBXL16Q8N461 479 aa20.93■□□□□ 0.94
CAPN1-201ENST00000279247 TNRC6CQ9HCJ0 1690 aaKnown RBP20.92■□□□□ 0.94
CAPN1-201ENST00000279247 CYP2D6P10635 497 aa20.92■□□□□ 0.94
CAPN1-201ENST00000279247 SART3Q15020 963 aaKnown RBP20.92■□□□□ 0.94
CAPN1-201ENST00000279247 TNMDQ9H2S6 317 aa20.92■□□□□ 0.94
CAPN1-201ENST00000279247 DOCK2Q92608 1830 aa20.92■□□□□ 0.94
CAPN1-201ENST00000279247 KIF28PB7ZC32 967 aa20.92■□□□□ 0.94
CAPN1-201ENST00000279247 IARSP41252 1262 aaKnown RBP20.92■□□□□ 0.94
CAPN1-201ENST00000279247 CPLX2Q6PUV4 134 aaKnown RBP20.92■□□□□ 0.94
CAPN1-201ENST00000279247 FBXO18Q8NFZ0 1043 aa20.92■□□□□ 0.94
CAPN1-201ENST00000279247 PLSCR1O15162 318 aa20.91■□□□□ 0.94
CAPN1-201ENST00000279247 GPSM2P81274 684 aa20.91■□□□□ 0.94
CAPN1-201ENST00000279247 BAZ2BQ9UIF8 2168 aaKnown RBP20.91■□□□□ 0.94
CAPN1-201ENST00000279247 MYH13Q9UKX3 1938 aa20.91■□□□□ 0.94
CAPN1-201ENST00000279247 ZNF831Q5JPB2 1677 aa20.91■□□□□ 0.94
CAPN1-201ENST00000279247 ELP1O95163 1332 aa20.91■□□□□ 0.94
CAPN1-201ENST00000279247 C4AP0C0L4 1744 aa20.91■□□□□ 0.94
CAPN1-201ENST00000279247 hCG_1642624A0A1W2PR95 340 aa20.91■□□□□ 0.94
CAPN1-201ENST00000279247 STAG1Q8WVM7 1258 aa20.91■□□□□ 0.94
CAPN1-201ENST00000279247 FBXW7Q969H0 707 aa20.91■□□□□ 0.94
CAPN1-201ENST00000279247 SF3A1Q15459 793 aaKnown RBP20.91■□□□□ 0.94
CAPN1-201ENST00000279247 ERCC4Q92889 916 aaPredicted RBP20.91■□□□□ 0.94
CAPN1-201ENST00000279247 USP25Q9UHP3 1055 aa20.91■□□□□ 0.94
CAPN1-201ENST00000279247 CLIC4Q9Y696 253 aa20.91■□□□□ 0.94
CAPN1-201ENST00000279247 C6orf229H3BNL8 230 aa20.9■□□□□ 0.94
CAPN1-201ENST00000279247 OLFM4Q6UX06 510 aa20.9■□□□□ 0.94
CAPN1-201ENST00000279247 FAM47AQ5JRC9 791 aa20.9■□□□□ 0.94
CAPN1-201ENST00000279247 TNKSO95271 1327 aa20.9■□□□□ 0.94
CAPN1-201ENST00000279247 NMT2O60551 498 aa20.89■□□□□ 0.94
CAPN1-201ENST00000279247 GUCY1A2P33402 732 aa20.89■□□□□ 0.94
CAPN1-201ENST00000279247 CCAR1Q8IX12 1150 aaKnown RBP20.89■□□□□ 0.94
CAPN1-201ENST00000279247 PIBF1Q8WXW3 757 aa20.89■□□□□ 0.94
CAPN1-201ENST00000279247 AKT1S1Q96B36 256 aa20.89■□□□□ 0.94
CAPN1-201ENST00000279247 ZNF396Q96N95 335 aaPredicted RBP20.89■□□□□ 0.94
CAPN1-201ENST00000279247 RNF41Q9H4P4 317 aaPredicted RBP20.89■□□□□ 0.94
CAPN1-201ENST00000279247 FAM217BQ9NTX9 383 aaPredicted RBP20.89■□□□□ 0.94
CAPN1-201ENST00000279247 MTMR7Q9Y216 660 aa20.89■□□□□ 0.94
CAPN1-201ENST00000279247 WDR19Q8NEZ3 1342 aa20.89■□□□□ 0.93
CAPN1-201ENST00000279247 A0A087WWV3 80 aa20.89■□□□□ 0.93
CAPN1-201ENST00000279247 STK38Q15208 465 aa20.89■□□□□ 0.93
CAPN1-201ENST00000279247 MAP3K11Q16584 847 aa20.89■□□□□ 0.93
CAPN1-201ENST00000279247 CTR9Q6PD62 1173 aa20.89■□□□□ 0.93
CAPN1-201ENST00000279247 RIMBP2O15034 1052 aa20.88■□□□□ 0.93
CAPN1-201ENST00000279247 ADRA2BP18089 450 aa20.88■□□□□ 0.93
CAPN1-201ENST00000279247 MCM9Q9NXL9 1143 aa20.88■□□□□ 0.93
CAPN1-201ENST00000279247 XDHP47989 1333 aa20.88■□□□□ 0.93
CAPN1-201ENST00000279247 LDHBP07195 334 aaKnown RBP20.88■□□□□ 0.93
CAPN1-201ENST00000279247 RTN1Q16799 776 aa20.88■□□□□ 0.93
CAPN1-201ENST00000279247 KRT40Q6A162 431 aa20.88■□□□□ 0.93
CAPN1-201ENST00000279247 ESR2Q92731 530 aa20.88■□□□□ 0.93
CAPN1-201ENST00000279247 MYH2Q9UKX2 1941 aa20.88■□□□□ 0.93
CAPN1-201ENST00000279247 RGL2O15211 777 aa20.88■□□□□ 0.93
CAPN1-201ENST00000279247 FAM43AQ8N2R8 423 aa20.88■□□□□ 0.93
CAPN1-201ENST00000279247 CHD4Q14839 1912 aa20.88■□□□□ 0.93
CAPN1-201ENST00000279247 CDKL5O76039 1030 aa20.87■□□□□ 0.93
CAPN1-201ENST00000279247 USP17L8P0C7I0 530 aa20.87■□□□□ 0.93
CAPN1-201ENST00000279247 CRNKL1Q9BZJ0 848 aaKnown RBP20.87■□□□□ 0.93
CAPN1-201ENST00000279247 KCNJ14Q9UNX9 436 aa20.87■□□□□ 0.93
CAPN1-201ENST00000279247 UBR3Q6ZT12 1888 aa20.87■□□□□ 0.93
CAPN1-201ENST00000279247 LETM1O95202 739 aaPredicted RBP20.87■□□□□ 0.93
CAPN1-201ENST00000279247 MARCKSP29966 332 aaPredicted RBP20.87■□□□□ 0.93
CAPN1-201ENST00000279247 LIFRP42702 1097 aa20.87■□□□□ 0.93
CAPN1-201ENST00000279247 SGMS1Q86VZ5 419 aa20.87■□□□□ 0.93
CAPN1-201ENST00000279247 DCP1AQ9NPI6 582 aaPredicted RBP20.87■□□□□ 0.93
CAPN1-201ENST00000279247 CACNA1SQ13698 1873 aa20.87■□□□□ 0.93
CAPN1-201ENST00000279247 SEMA3EO15041 775 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 ATP2B1P20020 1258 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 SSRP1Q08945 709 aaKnown RBP20.86■□□□□ 0.93
CAPN1-201ENST00000279247 TRIM29Q14134 588 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 ZNF654Q8IZM8 581 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 GOLPH3LQ9H4A5 285 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 A0A1B0GUL6 1792 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 POLRMTO00411 1230 aaKnown RBP20.86■□□□□ 0.93
CAPN1-201ENST00000279247 PTMAP06454 111 aaKnown RBP20.86■□□□□ 0.93
CAPN1-201ENST00000279247 USP5P45974 858 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 A0A1B0GVL5 298 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 ESPNB1AK53 854 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 MMP10P09238 476 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 KIF23Q02241 960 aaPredicted RBP20.86■□□□□ 0.93
CAPN1-201ENST00000279247 NTRK3Q16288 839 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 MYSM1Q5VVJ2 828 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 FSIP1Q8NA03 581 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 PPP1R9BQ96SB3 815 aa20.86■□□□□ 0.93
CAPN1-201ENST00000279247 CCDC192P0DO97 292 aa20.85■□□□□ 0.93
CAPN1-201ENST00000279247 COL24A1Q17RW2 1714 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms