RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 GPR75-ASB3A0A0A6YYF3 556 aa17.71■□□□□ 0.43
HMGN3-201ENST00000275036 CCL15-CCL14A0A0B4J2E2 113 aa17.71■□□□□ 0.43
HMGN3-201ENST00000275036 IRF6O14896 467 aa17.71■□□□□ 0.43
HMGN3-201ENST00000275036 CCL15Q16663 113 aa17.71■□□□□ 0.43
HMGN3-201ENST00000275036 CCDC158Q5M9N0 1113 aa17.71■□□□□ 0.43
HMGN3-201ENST00000275036 DCAF15Q66K64 600 aa17.71■□□□□ 0.43
HMGN3-201ENST00000275036 FAM43AQ8N2R8 423 aa17.71■□□□□ 0.43
HMGN3-201ENST00000275036 ZNF512BQ96KM6 892 aaPredicted RBP17.71■□□□□ 0.43
HMGN3-201ENST00000275036 HPS5Q9UPZ3 1129 aa17.71■□□□□ 0.43
HMGN3-201ENST00000275036 DDTLA6NHG4 134 aaPredicted RBP17.7■□□□□ 0.42
HMGN3-201ENST00000275036 ENTPD3O75355 529 aa17.7■□□□□ 0.42
HMGN3-201ENST00000275036 CYP2E1P05181 493 aaPredicted RBP17.7■□□□□ 0.42
HMGN3-201ENST00000275036 RGS19P49795 217 aa17.7■□□□□ 0.42
HMGN3-201ENST00000275036 GTF2A2P52657 109 aa17.7■□□□□ 0.42
HMGN3-201ENST00000275036 ERO1BQ86YB8 467 aa17.7■□□□□ 0.42
HMGN3-201ENST00000275036 SLF2Q8IX21 1173 aa17.7■□□□□ 0.42
HMGN3-201ENST00000275036 HOOK2Q96ED9 719 aa17.7■□□□□ 0.42
HMGN3-201ENST00000275036 RAI14Q9P0K7 980 aa17.7■□□□□ 0.42
HMGN3-201ENST00000275036 FOCADQ5VW36 1801 aa17.7■□□□□ 0.42
HMGN3-201ENST00000275036 ZAP70P43403 619 aa17.69■□□□□ 0.42
HMGN3-201ENST00000275036 PPIL2Q13356 520 aa17.69■□□□□ 0.42
HMGN3-201ENST00000275036 PICALMQ13492 652 aa17.69■□□□□ 0.42
HMGN3-201ENST00000275036 ERC1Q8IUD2 1116 aa17.69■□□□□ 0.42
HMGN3-201ENST00000275036 RHPN1Q8TCX5 695 aa17.69■□□□□ 0.42
HMGN3-201ENST00000275036 IL1RAPL2Q9NP60 686 aa17.69■□□□□ 0.42
HMGN3-201ENST00000275036 ZSWIM8A7E2V4 1837 aa17.68■□□□□ 0.42
HMGN3-201ENST00000275036 PHF20L1A8MW92 1017 aa17.68■□□□□ 0.42
HMGN3-201ENST00000275036 AACSQ86V21 672 aa17.68■□□□□ 0.42
HMGN3-201ENST00000275036 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
HMGN3-201ENST00000275036 PIH1D3Q9NQM4 214 aaKnown RBP17.68■□□□□ 0.42
HMGN3-201ENST00000275036 LRP2BPQ9P2M1 347 aa17.68■□□□□ 0.42
HMGN3-201ENST00000275036 NDUFB9Q9Y6M9 179 aa17.68■□□□□ 0.42
HMGN3-201ENST00000275036 BTBD19C9JJ37 291 aa17.67■□□□□ 0.42
HMGN3-201ENST00000275036 APBB1O00213 710 aa17.67■□□□□ 0.42
HMGN3-201ENST00000275036 SOX10P56693 466 aa17.67■□□□□ 0.42
HMGN3-201ENST00000275036 PPATQ06203 517 aa17.67■□□□□ 0.42
HMGN3-201ENST00000275036 HSP90AB4PQ58FF6 505 aa17.67■□□□□ 0.42
HMGN3-201ENST00000275036 NOL9Q5SY16 702 aaKnown RBP17.67■□□□□ 0.42
HMGN3-201ENST00000275036 OTUD7BQ6GQQ9 843 aa17.67■□□□□ 0.42
HMGN3-201ENST00000275036 ADGRA1Q86SQ6 560 aa17.67■□□□□ 0.42
HMGN3-201ENST00000275036 CD99L2Q8TCZ2 262 aa17.67■□□□□ 0.42
HMGN3-201ENST00000275036 SIPA1L1O43166 1804 aa17.67■□□□□ 0.42
HMGN3-201ENST00000275036 PHIPQ8WWQ0 1821 aa17.66■□□□□ 0.42
HMGN3-201ENST00000275036 CENPFP49454 3210 aa17.66■□□□□ 0.42
HMGN3-201ENST00000275036 HMMRO75330 724 aa17.66■□□□□ 0.42
HMGN3-201ENST00000275036 LDHCP07864 332 aa17.66■□□□□ 0.42
HMGN3-201ENST00000275036 GSTO1P78417 241 aa17.66■□□□□ 0.42
HMGN3-201ENST00000275036 MAP3K10Q02779 954 aa17.66■□□□□ 0.42
HMGN3-201ENST00000275036 MOGSQ13724 837 aa17.66■□□□□ 0.42
HMGN3-201ENST00000275036 TAF1CQ15572 869 aaPredicted RBP17.66■□□□□ 0.42
HMGN3-201ENST00000275036 PKN2Q16513 984 aaKnown RBP17.66■□□□□ 0.42
HMGN3-201ENST00000275036 FBXO46Q6PJ61 603 aaPredicted RBP17.66■□□□□ 0.42
HMGN3-201ENST00000275036 OTOP1Q7RTM1 612 aa17.66■□□□□ 0.42
HMGN3-201ENST00000275036 YTHDC1Q96MU7 727 aaKnown RBP17.66■□□□□ 0.42
HMGN3-201ENST00000275036 CHMP4BQ9H444 224 aaKnown RBP17.66■□□□□ 0.42
HMGN3-201ENST00000275036 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.66■□□□□ 0.42
HMGN3-201ENST00000275036 KCNH4Q9UQ05 1017 aa17.66■□□□□ 0.42
HMGN3-201ENST00000275036 DOCK1Q14185 1865 aa17.66■□□□□ 0.42
HMGN3-201ENST00000275036 CETPP11597 493 aa17.65■□□□□ 0.42
HMGN3-201ENST00000275036 SNAPC2Q13487 334 aa17.65■□□□□ 0.42
HMGN3-201ENST00000275036 SH3RF3Q8TEJ3 882 aaPredicted RBP17.65■□□□□ 0.42
HMGN3-201ENST00000275036 KIF1BPQ96EK5 621 aa17.65■□□□□ 0.42
HMGN3-201ENST00000275036 TRIM17Q9Y577 477 aa17.65■□□□□ 0.42
HMGN3-201ENST00000275036 PTPRFP10586 1907 aa17.64■□□□□ 0.42
HMGN3-201ENST00000275036 FAM196BA6NMK8 535 aa17.64■□□□□ 0.41
HMGN3-201ENST00000275036 NAA16Q6N069 864 aaPredicted RBP17.64■□□□□ 0.41
HMGN3-201ENST00000275036 ZSCAN29Q8IWY8 852 aaPredicted RBP17.64■□□□□ 0.41
HMGN3-201ENST00000275036 ANTXR1Q9H6X2 564 aa17.64■□□□□ 0.41
HMGN3-201ENST00000275036 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
HMGN3-201ENST00000275036 ATAD5Q96QE3 1844 aa17.63■□□□□ 0.41
HMGN3-201ENST00000275036 TNRC18O15417 2968 aaPredicted RBP17.63■□□□□ 0.41
HMGN3-201ENST00000275036 NPM3O75607 178 aaKnown RBP17.63■□□□□ 0.41
HMGN3-201ENST00000275036 SP3Q02447 781 aa17.63■□□□□ 0.41
HMGN3-201ENST00000275036 SCYL3Q8IZE3 742 aa17.63■□□□□ 0.41
HMGN3-201ENST00000275036 OSBPL5Q9H0X9 879 aaPredicted RBP17.63■□□□□ 0.41
HMGN3-201ENST00000275036 AATFQ9NY61 560 aaKnown RBP eCLIP17.63■□□□□ 0.41
HMGN3-201ENST00000275036 MYH1P12882 1939 aa17.62■□□□□ 0.41
HMGN3-201ENST00000275036 RAB11FIP3O75154 756 aa17.62■□□□□ 0.41
HMGN3-201ENST00000275036 PTPRAP18433 802 aa17.62■□□□□ 0.41
HMGN3-201ENST00000275036 MLLT1Q03111 559 aaPredicted RBP17.62■□□□□ 0.41
HMGN3-201ENST00000275036 RRP1BQ14684 758 aaKnown RBP17.62■□□□□ 0.41
HMGN3-201ENST00000275036 CCDC84Q86UT8 332 aaPredicted RBP17.62■□□□□ 0.41
HMGN3-201ENST00000275036 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
HMGN3-201ENST00000275036 ERO1AQ96HE7 468 aa17.62■□□□□ 0.41
HMGN3-201ENST00000275036 BCL11AQ9H165 835 aa17.62■□□□□ 0.41
HMGN3-201ENST00000275036 ZFYVE28Q9HCC9 887 aa17.62■□□□□ 0.41
HMGN3-201ENST00000275036 ADGRA2Q96PE1 1338 aa17.62■□□□□ 0.41
HMGN3-201ENST00000275036 MAP4K4O95819 1239 aaPredicted RBP17.61■□□□□ 0.41
HMGN3-201ENST00000275036 RRP1P56182 461 aaKnown RBP17.61■□□□□ 0.41
HMGN3-201ENST00000275036 PPP4CP60510 307 aa17.61■□□□□ 0.41
HMGN3-201ENST00000275036 TEX11Q8IYF3 940 aa17.61■□□□□ 0.41
HMGN3-201ENST00000275036 ARHGAP39Q9C0H5 1083 aa17.61■□□□□ 0.41
HMGN3-201ENST00000275036 PTPN22Q9Y2R2 807 aa17.61■□□□□ 0.41
HMGN3-201ENST00000275036 MYH7P12883 1935 aa17.6■□□□□ 0.41
HMGN3-201ENST00000275036 BRCA2P51587 3418 aa17.6■□□□□ 0.41
HMGN3-201ENST00000275036 TLR2O60603 784 aa17.6■□□□□ 0.41
HMGN3-201ENST00000275036 IDH1O75874 414 aaKnown RBP17.6■□□□□ 0.41
HMGN3-201ENST00000275036 DYNLL1P63167 89 aaKnown RBP17.6■□□□□ 0.41
HMGN3-201ENST00000275036 GPAT2Q6NUI2 795 aa17.6■□□□□ 0.41
HMGN3-201ENST00000275036 ANKRD23Q86SG2 305 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms