RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 TTC6Q86TZ1 520 aa10.23□□□□□ -0.77
TRIM43-201ENST00000272395 DSCC1Q9BVC3 393 aa10.23□□□□□ -0.77
TRIM43-201ENST00000272395 NUP62CLQ9H1M0 184 aa10.23□□□□□ -0.77
TRIM43-201ENST00000272395 ZSCAN16Q9H4T2 348 aaPredicted RBP10.23□□□□□ -0.77
TRIM43-201ENST00000272395 USP25Q9UHP3 1055 aa10.23□□□□□ -0.77
TRIM43-201ENST00000272395 TAOK2Q9UL54 1235 aa10.23□□□□□ -0.77
TRIM43-201ENST00000272395 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRIM43-201ENST00000272395 CAVIN2O95810 425 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 VIL1P09327 827 aaKnown RBP10.22□□□□□ -0.77
TRIM43-201ENST00000272395 RASGRF1Q13972 1273 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 TNIP1Q15025 636 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 MAP3K11Q16584 847 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 DACT2Q5SW24 774 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 DPY19L2Q6NUT2 758 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 SASS6Q6UVJ0 657 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 GPC2Q8N158 579 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 CERS5Q8N5B7 392 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.22□□□□□ -0.77
TRIM43-201ENST00000272395 SPATA32Q96LK8 384 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 MAP7D2Q96T17 732 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 NMRK2Q9NPI5 230 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 CCDC88AQ3V6T2 1871 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 GOLGA6L4A6NEF3 574 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 GOLGA6L6A8MZA4 724 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 GRIK5Q16478 980 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 LRRFIP1Q32MZ4 808 aaKnown RBP10.22□□□□□ -0.77
TRIM43-201ENST00000272395 GLIPR1L2Q4G1C9 344 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 TTC39AQ5SRH9 613 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 STRIP1Q5VSL9 837 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 ATL3Q6DD88 541 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 NAA16Q6N069 864 aaPredicted RBP10.22□□□□□ -0.77
TRIM43-201ENST00000272395 GIMAP6Q6P9H5 292 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 RSBN1LQ6PCB5 846 aaPredicted RBP10.22□□□□□ -0.77
TRIM43-201ENST00000272395 RBM43Q6ZSC3 357 aaKnown RBP10.22□□□□□ -0.77
TRIM43-201ENST00000272395 PIBF1Q8WXW3 757 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 GNL3LQ9NVN8 582 aaKnown RBP10.22□□□□□ -0.77
TRIM43-201ENST00000272395 CFAP45Q9UL16 551 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 NDUFB9Q9Y6M9 179 aa10.22□□□□□ -0.77
TRIM43-201ENST00000272395 SCN9AQ15858 1988 aa10.21□□□□□ -0.77
TRIM43-201ENST00000272395 POTECB2RU33 542 aa10.21□□□□□ -0.78
TRIM43-201ENST00000272395 F8W031 263 aaPredicted RBP10.21□□□□□ -0.78
TRIM43-201ENST00000272395 DYNC1I1O14576 645 aa10.21□□□□□ -0.78
TRIM43-201ENST00000272395 PFKFB2O60825 505 aa10.21□□□□□ -0.78
TRIM43-201ENST00000272395 MCAMP43121 646 aa10.21□□□□□ -0.78
TRIM43-201ENST00000272395 SCNN1DP51172 638 aa10.21□□□□□ -0.78
TRIM43-201ENST00000272395 HMGN5P82970 282 aaKnown RBP10.21□□□□□ -0.78
TRIM43-201ENST00000272395 CCDC158Q5M9N0 1113 aa10.21□□□□□ -0.78
TRIM43-201ENST00000272395 DHX32Q7L7V1 743 aaKnown RBP10.21□□□□□ -0.78
TRIM43-201ENST00000272395 FAM200AQ8TCP9 573 aa10.21□□□□□ -0.78
TRIM43-201ENST00000272395 LEO1Q8WVC0 666 aaPredicted RBP10.21□□□□□ -0.78
TRIM43-201ENST00000272395 DNAJC2Q99543 621 aaKnown RBP10.21□□□□□ -0.78
TRIM43-201ENST00000272395 AGXT2Q9BYV1 514 aa10.21□□□□□ -0.78
TRIM43-201ENST00000272395 RRAGCQ9HB90 399 aa10.21□□□□□ -0.78
TRIM43-201ENST00000272395 PAG1Q9NWQ8 432 aa10.21□□□□□ -0.78
TRIM43-201ENST00000272395 R3HCC1Q9Y3T6 440 aaKnown RBP10.21□□□□□ -0.78
TRIM43-201ENST00000272395 TAF6LQ9Y6J9 622 aa10.21□□□□□ -0.78
TRIM43-201ENST00000272395 FAM205AQ6ZU69 1335 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 ARAP2Q8WZ64 1704 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 CYP21A2P08686 494 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 ARID4AP29374 1257 aaPredicted RBP10.2□□□□□ -0.78
TRIM43-201ENST00000272395 EPS15P42566 896 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 MFSD14BQ5SR56 506 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 ZMYM1Q5SVZ6 1142 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 Q6ZUG5 572 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 MTERF4Q7Z6M4 381 aaKnown RBP10.2□□□□□ -0.78
TRIM43-201ENST00000272395 KIAA0825Q8IV33 1275 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 FBXL16Q8N461 479 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 ZNF784Q8NCA9 323 aaPredicted RBP10.2□□□□□ -0.78
TRIM43-201ENST00000272395 SMARCC2Q8TAQ2 1214 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 UBE2Q2Q8WVN8 375 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 EDC3Q96F86 508 aaKnown RBP10.2□□□□□ -0.78
TRIM43-201ENST00000272395 GMLQ99445 158 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 PDCL3Q9H2J4 239 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 TNMDQ9H2S6 317 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 SPTLC3Q9NUV7 552 aa10.2□□□□□ -0.78
TRIM43-201ENST00000272395 DICER1Q9UPY3 1922 aaKnown RBP10.2□□□□□ -0.78
TRIM43-201ENST00000272395 UQCRFS1P1P0C7P4 283 aa10.19□□□□□ -0.78
TRIM43-201ENST00000272395 RESTQ13127 1097 aa10.19□□□□□ -0.78
TRIM43-201ENST00000272395 FERMT3Q86UX7 667 aa10.19□□□□□ -0.78
TRIM43-201ENST00000272395 MICALL2Q8IY33 904 aa10.19□□□□□ -0.78
TRIM43-201ENST00000272395 SPATA5Q8NB90 893 aa10.19□□□□□ -0.78
TRIM43-201ENST00000272395 SP7Q8TDD2 431 aaPredicted RBP10.19□□□□□ -0.78
TRIM43-201ENST00000272395 L3MBTL3Q96JM7 780 aaPredicted RBP10.19□□□□□ -0.78
TRIM43-201ENST00000272395 PRIMPOLQ96LW4 560 aa10.19□□□□□ -0.78
TRIM43-201ENST00000272395 CLSTN2Q9H4D0 955 aa10.19□□□□□ -0.78
TRIM43-201ENST00000272395 GPBP1L1Q9HC44 474 aaPredicted RBP10.19□□□□□ -0.78
TRIM43-201ENST00000272395 GPRC5DQ9NZD1 345 aa10.19□□□□□ -0.78
TRIM43-201ENST00000272395 DENND2AQ9ULE3 1009 aa10.19□□□□□ -0.78
TRIM43-201ENST00000272395 CHD4Q14839 1912 aa10.19□□□□□ -0.78
TRIM43-201ENST00000272395 H3BQV1 296 aa10.18□□□□□ -0.78
TRIM43-201ENST00000272395 SEMA3EO15041 775 aa10.18□□□□□ -0.78
TRIM43-201ENST00000272395 EGFRP00533 1210 aa10.18□□□□□ -0.78
TRIM43-201ENST00000272395 ZFYP08048 801 aaPredicted RBP10.18□□□□□ -0.78
TRIM43-201ENST00000272395 LIG1P18858 919 aa10.18□□□□□ -0.78
TRIM43-201ENST00000272395 ZAP70P43403 619 aa10.18□□□□□ -0.78
TRIM43-201ENST00000272395 FGD1P98174 961 aa10.18□□□□□ -0.78
TRIM43-201ENST00000272395 TYRO3Q06418 890 aa10.18□□□□□ -0.78
TRIM43-201ENST00000272395 IFFO2Q5TF58 517 aa10.18□□□□□ -0.78
TRIM43-201ENST00000272395 BRF1Q92994 677 aa10.18□□□□□ -0.78
TRIM43-201ENST00000272395 TCEANC2Q96MN5 208 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms