RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 PEX19P40855 299 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 CCDC170Q8IYT3 715 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 ADGRL1O94910 1474 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 MAGEB6P1A0A0J9YX57 407 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 F8W8V4 182 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 UBL4BQ8N7F7 174 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 SLC4A4Q9Y6R1 1079 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 CPLX3Q8WVH0 158 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 PLCD1P51178 756 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 FYB2Q5VWT5 728 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 DTHD1Q6ZMT9 781 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 IQUBQ8NA54 791 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 PPP1R12AO14974 1030 aaPredicted RBP14.74□□□□□ -0.05
PRDM16-201ENST00000270722 ITIH3Q06033 890 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 LZTS2Q9BRK4 669 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 VPS18Q9P253 973 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 NCAPD3P42695 1498 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 ATP6V1E1P36543 226 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 PLCB1Q9NQ66 1216 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 FAM212AQ96EL1 285 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 ITGB1BP2Q9UKP3 347 aa14.74□□□□□ -0.05
PRDM16-201ENST00000270722 TYW5A2RUC4 315 aaKnown RBP14.73□□□□□ -0.05
PRDM16-201ENST00000270722 KRT10P13645 584 aa14.73□□□□□ -0.05
PRDM16-201ENST00000270722 BIRC3Q13489 604 aa14.73□□□□□ -0.05
PRDM16-201ENST00000270722 PPP2R5BQ15173 497 aa14.73□□□□□ -0.05
PRDM16-201ENST00000270722 SDCCAG8Q86SQ7 713 aaPredicted RBP14.73□□□□□ -0.05
PRDM16-201ENST00000270722 CCT2P78371 535 aaKnown RBP14.73□□□□□ -0.05
PRDM16-201ENST00000270722 IQCDQ96DY2 449 aa14.73□□□□□ -0.05
PRDM16-201ENST00000270722 BRAPQ7Z569 592 aa14.73□□□□□ -0.05
PRDM16-201ENST00000270722 CEP85LQ5SZL2 805 aa14.73□□□□□ -0.05
PRDM16-201ENST00000270722 AFAP1L1Q8TED9 768 aa14.73□□□□□ -0.05
PRDM16-201ENST00000270722 LRRC59Q96AG4 307 aaKnown RBP14.73□□□□□ -0.05
PRDM16-201ENST00000270722 NIP7Q9Y221 180 aaKnown RBP eCLIP14.73□□□□□ -0.05
PRDM16-201ENST00000270722 H0YCG3 227 aa14.73□□□□□ -0.05
PRDM16-201ENST00000270722 NOP14P78316 857 aaKnown RBP14.73□□□□□ -0.05
PRDM16-201ENST00000270722 ALG1Q9BT22 464 aa14.73□□□□□ -0.05
PRDM16-201ENST00000270722 CCDC8Q9H0W5 538 aaPredicted RBP14.73□□□□□ -0.05
PRDM16-201ENST00000270722 MMRN2Q9H8L6 949 aa14.73□□□□□ -0.05
PRDM16-201ENST00000270722 DPH6Q7L8W6 267 aa14.73□□□□□ -0.05
PRDM16-201ENST00000270722 POLR2BP30876 1174 aaKnown RBP14.72□□□□□ -0.05
PRDM16-201ENST00000270722 KRT2P35908 639 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 DPY19L2Q6NUT2 758 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 SYF2O95926 243 aaKnown RBP14.72□□□□□ -0.05
PRDM16-201ENST00000270722 NFKBIAP25963 317 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 PPP1R21Q6ZMI0 780 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 CFTRP13569 1480 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 PDZD4Q76G19 769 aaPredicted RBP14.72□□□□□ -0.05
PRDM16-201ENST00000270722 ARHGEF37A1IGU5 675 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 VPS41P49754 854 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 MYSM1Q5VVJ2 828 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 CNGA4Q8IV77 575 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 SKOR1P84550 965 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 MCMDC2Q4G0Z9 681 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 PARP10Q53GL7 1025 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 AFG3L2Q9Y4W6 797 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 GIGYF1O75420 1035 aaPredicted RBP14.72□□□□□ -0.05
PRDM16-201ENST00000270722 MUM1Q2TAK8 710 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 CENPKQ9BS16 269 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 BACH2Q9BYV9 841 aa14.72□□□□□ -0.05
PRDM16-201ENST00000270722 PARP1P09874 1014 aaKnown RBP14.72□□□□□ -0.05
PRDM16-201ENST00000270722 ARHGEF9O43307 516 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 PPFIA1Q13136 1202 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 BMP2KLQ5H9B9 411 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 SLC12A2P55011 1212 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 TRIM14Q14142 442 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 SERPINA10Q9UK55 444 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 DENND2AQ9ULE3 1009 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 LMNB2Q03252 620 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 RASA3Q14644 834 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 DIXDC1Q155Q3 683 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 FLAD1Q8NFF5 587 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 MRPS27Q92552 414 aaKnown RBP14.71□□□□□ -0.05
PRDM16-201ENST00000270722 HAUS1Q96CS2 278 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 SPOUT1Q5T280 376 aaKnown RBP14.71□□□□□ -0.05
PRDM16-201ENST00000270722 GJC2Q5T442 439 aaPredicted RBP14.71□□□□□ -0.05
PRDM16-201ENST00000270722 INTS8Q75QN2 995 aaKnown RBP14.71□□□□□ -0.05
PRDM16-201ENST00000270722 MCM9Q9NXL9 1143 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 TUBB2AQ13885 445 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 TUBB2BQ9BVA1 445 aa14.71□□□□□ -0.05
PRDM16-201ENST00000270722 NCOA1Q15788 1441 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 RALGAPBQ86X10 1494 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 KLF18A0A0U1RQI7 1052 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 A0A1B0GW55 424 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 DUX4L2P0CJ85 424 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 DUX4L3P0CJ86 424 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 DUX4L4P0CJ87 422 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 DUX4L5P0CJ88 424 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 DUX4L6P0CJ89 424 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 DUX4L7P0CJ90 424 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 DUX4Q9UBX2 424 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.71□□□□□ -0.06
PRDM16-201ENST00000270722 RAD50Q92878 1312 aa14.71□□□□□ -0.06
PRDM16-201ENST00000270722 YY1AP1Q9H869 796 aa14.7□□□□□ -0.06
PRDM16-201ENST00000270722 RAP1GDS1P52306 607 aa14.7□□□□□ -0.06
PRDM16-201ENST00000270722 FAM210AQ96ND0 272 aa14.7□□□□□ -0.06
PRDM16-201ENST00000270722 PALM2Q8IXS6 379 aa14.7□□□□□ -0.06
PRDM16-201ENST00000270722 FAM200AQ8TCP9 573 aa14.7□□□□□ -0.06
PRDM16-201ENST00000270722 KRT7P08729 469 aa14.7□□□□□ -0.06
PRDM16-201ENST00000270722 IL2RBP14784 551 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms