RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 NUP188Q5SRE5 1749 aa19.43■□□□□ 0.7
RTN1-201ENST00000267484 TMEM94Q12767 1356 aa19.43■□□□□ 0.7
RTN1-201ENST00000267484 VWA3AA6NCI4 1184 aa19.43■□□□□ 0.7
RTN1-201ENST00000267484 PNMA6AP0CW24 399 aaPredicted RBP19.43■□□□□ 0.7
RTN1-201ENST00000267484 TMEM139Q8IV31 216 aa19.43■□□□□ 0.7
RTN1-201ENST00000267484 LY9Q9HBG7 655 aa19.43■□□□□ 0.7
RTN1-201ENST00000267484 TOMM22Q9NS69 142 aa19.43■□□□□ 0.7
RTN1-201ENST00000267484 PCDH11XQ9BZA7 1347 aa19.43■□□□□ 0.7
RTN1-201ENST00000267484 PCDH11YQ9BZA8 1340 aa19.43■□□□□ 0.7
RTN1-201ENST00000267484 RIC1Q4ADV7 1423 aa19.43■□□□□ 0.7
RTN1-201ENST00000267484 TOGARAM2Q6ZUX3 1019 aa19.42■□□□□ 0.7
RTN1-201ENST00000267484 PARP3Q9Y6F1 533 aa19.42■□□□□ 0.7
RTN1-201ENST00000267484 C4AP0C0L4 1744 aa19.42■□□□□ 0.7
RTN1-201ENST00000267484 C4BP0C0L5 1744 aa19.42■□□□□ 0.7
RTN1-201ENST00000267484 PPP2R2CQ9Y2T4 447 aa19.42■□□□□ 0.7
RTN1-201ENST00000267484 LAMB4A4D0S4 1761 aa19.42■□□□□ 0.7
RTN1-201ENST00000267484 CBFA2T2O43439 604 aa19.42■□□□□ 0.7
RTN1-201ENST00000267484 PDE6AP16499 860 aa19.42■□□□□ 0.7
RTN1-201ENST00000267484 BMS1Q14692 1282 aaKnown RBP19.42■□□□□ 0.7
RTN1-201ENST00000267484 CPLX2Q6PUV4 134 aaKnown RBP19.42■□□□□ 0.7
RTN1-201ENST00000267484 TICAM2Q86XR7 235 aa19.42■□□□□ 0.7
RTN1-201ENST00000267484 PRDM11Q9NQV5 511 aa19.42■□□□□ 0.7
RTN1-201ENST00000267484 ZSWIM5Q9P217 1185 aa19.42■□□□□ 0.7
RTN1-201ENST00000267484 IFIT3O14879 490 aaKnown RBP19.41■□□□□ 0.7
RTN1-201ENST00000267484 POLR2DO15514 142 aaKnown RBP19.41■□□□□ 0.7
RTN1-201ENST00000267484 CDKL5O76039 1030 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 PLA2G4AP47712 749 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 KCNJ6P48051 423 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 TOB1P50616 345 aaPredicted RBP19.41■□□□□ 0.7
RTN1-201ENST00000267484 USP49Q70CQ1 688 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 SEC31BQ9NQW1 1179 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 STRN4Q9NRL3 753 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 ASAP1Q9ULH1 1129 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 MYO5AQ9Y4I1 1855 aaKnown RBP19.41■□□□□ 0.7
RTN1-201ENST00000267484 POLR3GO15318 223 aaPredicted RBP19.41■□□□□ 0.7
RTN1-201ENST00000267484 CDK11BP21127 795 aaKnown RBP19.41■□□□□ 0.7
RTN1-201ENST00000267484 GNG11P61952 73 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 NR5A1Q13285 461 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 SERTAD1Q9UHV2 236 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 MAN1B1Q9UKM7 699 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 NFE2L3Q9Y4A8 694 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 PHLPP2Q6ZVD8 1323 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 ZBTB22O15209 634 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 PCCAP05165 728 aaPredicted RBP19.41■□□□□ 0.7
RTN1-201ENST00000267484 CSF1RP07333 972 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 TTLL11Q8NHH1 800 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 AIDAQ96BJ3 306 aa19.41■□□□□ 0.7
RTN1-201ENST00000267484 EPB41L4AQ9HCS5 686 aaPredicted RBP19.41■□□□□ 0.7
RTN1-201ENST00000267484 KCPQ6ZWJ8 1503 aa19.4■□□□□ 0.7
RTN1-201ENST00000267484 KARSQ15046 597 aaKnown RBP19.4■□□□□ 0.7
RTN1-201ENST00000267484 ZBTB38Q8NAP3 1195 aaPredicted RBP19.4■□□□□ 0.7
RTN1-201ENST00000267484 SLC12A7Q9Y666 1083 aa19.4■□□□□ 0.7
RTN1-201ENST00000267484 SPEF2Q9C093 1822 aa19.4■□□□□ 0.7
RTN1-201ENST00000267484 ERVV-2B6SEH9 535 aa19.4■□□□□ 0.7
RTN1-201ENST00000267484 PRKAB2O43741 272 aa19.4■□□□□ 0.7
RTN1-201ENST00000267484 CUTAO60888 179 aa19.4■□□□□ 0.7
RTN1-201ENST00000267484 TADA3O75528 432 aa19.4■□□□□ 0.7
RTN1-201ENST00000267484 MTF1Q14872 753 aa19.4■□□□□ 0.7
RTN1-201ENST00000267484 NOL10Q9BSC4 688 aaKnown RBP19.4■□□□□ 0.7
RTN1-201ENST00000267484 IRX2Q9BZI1 471 aaPredicted RBP19.4■□□□□ 0.7
RTN1-201ENST00000267484 SAMSN1Q9NSI8 373 aaKnown RBP19.4■□□□□ 0.7
RTN1-201ENST00000267484 KRI1Q8N9T8 703 aaKnown RBP19.39■□□□□ 0.7
RTN1-201ENST00000267484 BAG1Q99933 345 aaPredicted RBP19.39■□□□□ 0.7
RTN1-201ENST00000267484 ARMT1Q9H993 441 aa19.39■□□□□ 0.7
RTN1-201ENST00000267484 SSRP1Q08945 709 aaKnown RBP19.39■□□□□ 0.69
RTN1-201ENST00000267484 DIS3L2Q8IYB7 885 aaKnown RBP19.39■□□□□ 0.69
RTN1-201ENST00000267484 MED15Q96RN5 788 aa19.39■□□□□ 0.69
RTN1-201ENST00000267484 PCDHB6Q9Y5E3 794 aa19.39■□□□□ 0.69
RTN1-201ENST00000267484 MST1RQ04912 1400 aa19.39■□□□□ 0.69
RTN1-201ENST00000267484 CASP1P29466 404 aa19.39■□□□□ 0.69
RTN1-201ENST00000267484 MDM2Q00987 491 aaPredicted RBP19.39■□□□□ 0.69
RTN1-201ENST00000267484 KIF6Q6ZMV9 814 aa19.39■□□□□ 0.69
RTN1-201ENST00000267484 NOSTRINQ8IVI9 506 aa19.39■□□□□ 0.69
RTN1-201ENST00000267484 STRBPQ96SI9 672 aaKnown RBP19.39■□□□□ 0.69
RTN1-201ENST00000267484 ZSWIM4Q9H7M6 989 aa19.39■□□□□ 0.69
RTN1-201ENST00000267484 A0A0U1RQJ8 604 aa19.38■□□□□ 0.69
RTN1-201ENST00000267484 TEX35Q5T0J7 233 aa19.38■□□□□ 0.69
RTN1-201ENST00000267484 TMCO3Q6UWJ1 677 aa19.38■□□□□ 0.69
RTN1-201ENST00000267484 ATRIPQ8WXE1 791 aa19.38■□□□□ 0.69
RTN1-201ENST00000267484 WDR19Q8NEZ3 1342 aa19.38■□□□□ 0.69
RTN1-201ENST00000267484 MBD4O95243 580 aa19.38■□□□□ 0.69
RTN1-201ENST00000267484 POSTNQ15063 836 aa19.38■□□□□ 0.69
RTN1-201ENST00000267484 MAGEB6Q8N7X4 407 aa19.38■□□□□ 0.69
RTN1-201ENST00000267484 OXER1Q8TDS5 423 aa19.38■□□□□ 0.69
RTN1-201ENST00000267484 PKD1L3Q7Z443 1732 aa19.38■□□□□ 0.69
RTN1-201ENST00000267484 TC2NQ8N9U0 490 aa19.38■□□□□ 0.69
RTN1-201ENST00000267484 ZCCHC17Q9NP64 241 aaKnown RBP19.38■□□□□ 0.69
RTN1-201ENST00000267484 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.38■□□□□ 0.69
RTN1-201ENST00000267484 NAPBQ9H115 298 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 ARHGAP6O43182 974 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 COBLO75128 1261 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 CPLX3Q8WVH0 158 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 FAM237AA0A1B0GTK4 181 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 hCG_1642624A0A1W2PR95 340 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 FAM205CA6NFA0 338 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 SMIM22K7EJ46 135 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 CCP110O43303 1012 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 KLHL10Q6JEL2 608 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 IFNL3Q8IZI9 196 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 NUP133Q8WUM0 1156 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms