RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 NID2Q14112 1375 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 RREB1Q92766 1687 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 MYH14Q7Z406 1995 aaKnown RBP14.43□□□□□ -0.1
BEST3-201ENST00000266661 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.42□□□□□ -0.1
BEST3-201ENST00000266661 IRS4O14654 1257 aaPredicted RBP14.42□□□□□ -0.1
BEST3-201ENST00000266661 PLSCR1O15162 318 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 PHKA1P46020 1223 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 PPP4R3BQ5MIZ7 849 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 CEP135Q66GS9 1140 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 KRT40Q6A162 431 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 SYNE3Q6ZMZ3 975 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 CCAR2Q8N163 923 aaKnown RBP14.42□□□□□ -0.1
BEST3-201ENST00000266661 TMEM87BQ96K49 555 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 ALG1Q9BT22 464 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 LY9Q9HBG7 655 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 WWC3Q9ULE0 1092 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 MYO5AQ9Y4I1 1855 aaKnown RBP14.42□□□□□ -0.1
BEST3-201ENST00000266661 IKBKBO14920 756 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 RANBP6O60518 1105 aaKnown RBP14.42□□□□□ -0.1
BEST3-201ENST00000266661 GPTP24298 496 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 KCNJ6P48051 423 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 ITPK1Q13572 414 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 SHC4Q6S5L8 630 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 FILIP1Q7Z7B0 1213 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 VPS37DQ86XT2 251 aa14.42□□□□□ -0.1
BEST3-201ENST00000266661 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.42□□□□□ -0.1
BEST3-201ENST00000266661 TIAM2Q8IVF5 1701 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 MYH3P11055 1940 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 LOC102724428A0A0B4J2F2 783 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 ERVV-1B6SEH8 477 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 PDE8AO60658 829 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 UQCRFS1P1P0C7P4 283 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 METAP2P50579 478 aaKnown RBP eCLIP14.41□□□□□ -0.1
BEST3-201ENST00000266661 SIK1P57059 783 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 TRDNQ13061 729 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 ARMCX5Q6P1M9 558 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 ZNF34Q8IZ26 560 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 XPO4Q9C0E2 1151 aaKnown RBP14.41□□□□□ -0.1
BEST3-201ENST00000266661 EPB41L4AQ9HCS5 686 aaPredicted RBP14.41□□□□□ -0.1
BEST3-201ENST00000266661 CCNL1Q9UK58 526 aaPredicted RBP14.41□□□□□ -0.1
BEST3-201ENST00000266661 PRDM4Q9UKN5 801 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 ZNF330Q9Y3S2 320 aaPredicted RBP14.41□□□□□ -0.1
BEST3-201ENST00000266661 ECM29Q5VYK3 1845 aa14.41□□□□□ -0.1
BEST3-201ENST00000266661 B4E1Z4 1266 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 CDKL5O76039 1030 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 ATP6V1AP38606 617 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 LIFRP42702 1097 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 RESP18Q5W5W9 173 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 CNNM1Q9NRU3 951 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 UBN2Q6ZU65 1347 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 STK36Q9NRP7 1315 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 RGPD3A6NKT7 1758 aaPredicted RBP14.4□□□□□ -0.1
BEST3-201ENST00000266661 RGPD4Q7Z3J3 1758 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 DOCK2Q92608 1830 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 PATL2C9JE40 543 aaKnown RBP14.4□□□□□ -0.1
BEST3-201ENST00000266661 E4F1Q66K89 784 aaPredicted RBP14.4□□□□□ -0.1
BEST3-201ENST00000266661 ELOA2Q8IYF1 753 aaPredicted RBP14.4□□□□□ -0.1
BEST3-201ENST00000266661 CCDC112Q8NEF3 446 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 LPIN2Q92539 896 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.4□□□□□ -0.1
BEST3-201ENST00000266661 ZBTB1Q9Y2K1 713 aa14.4□□□□□ -0.1
BEST3-201ENST00000266661 NUP98P52948 1817 aa14.39□□□□□ -0.11
BEST3-201ENST00000266661 IDH1O75874 414 aaKnown RBP14.39□□□□□ -0.11
BEST3-201ENST00000266661 MARCKSP29966 332 aaPredicted RBP14.39□□□□□ -0.11
BEST3-201ENST00000266661 NAA30Q147X3 362 aaPredicted RBP14.39□□□□□ -0.11
BEST3-201ENST00000266661 PTPN14Q15678 1187 aa14.39□□□□□ -0.11
BEST3-201ENST00000266661 IFNKQ9P0W0 207 aa14.39□□□□□ -0.11
BEST3-201ENST00000266661 MROH5Q6ZUA9 1318 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 ZBTB43O43298 467 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 ZSCAN20P17040 1043 aaPredicted RBP14.38□□□□□ -0.11
BEST3-201ENST00000266661 RXRAP19793 462 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 PUM3Q15397 648 aaKnown RBP14.38□□□□□ -0.11
BEST3-201ENST00000266661 AMIGO3Q86WK7 504 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 IFNL3Q8IZI9 196 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 LINC00116Q8NCU8 138 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 CCDC150Q8NCX0 1101 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 PHKBQ93100 1093 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 FBXW7Q969H0 707 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 AK7Q96M32 723 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 ARID3AQ99856 593 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 INCENPQ9NQS7 918 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 TRMT112Q9UI30 125 aaKnown RBP14.38□□□□□ -0.11
BEST3-201ENST00000266661 PSDA5PKW4 1024 aaPredicted RBP14.38□□□□□ -0.11
BEST3-201ENST00000266661 GSG1L2A8MUP6 293 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 BIN1O00499 593 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 SYKP43405 635 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 MDM2Q00987 491 aaPredicted RBP14.38□□□□□ -0.11
BEST3-201ENST00000266661 FOXP4Q8IVH2 680 aaPredicted RBP14.38□□□□□ -0.11
BEST3-201ENST00000266661 SMARCC1Q92922 1105 aaPredicted RBP14.38□□□□□ -0.11
BEST3-201ENST00000266661 ZSWIM5Q9P217 1185 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 TBC1D2BQ9UPU7 963 aa14.38□□□□□ -0.11
BEST3-201ENST00000266661 COL5A3P25940 1745 aaPredicted RBP14.37□□□□□ -0.11
BEST3-201ENST00000266661 UBE2Q2LH0YL09 131 aa14.37□□□□□ -0.11
BEST3-201ENST00000266661 CUTAO60888 179 aa14.37□□□□□ -0.11
BEST3-201ENST00000266661 FMNL1O95466 1100 aaPredicted RBP14.37□□□□□ -0.11
BEST3-201ENST00000266661 IFNAR1P17181 557 aa14.37□□□□□ -0.11
BEST3-201ENST00000266661 IL6STP40189 918 aaPredicted RBP14.37□□□□□ -0.11
BEST3-201ENST00000266661 IARSP41252 1262 aaKnown RBP14.37□□□□□ -0.11
BEST3-201ENST00000266661 FANCCQ00597 558 aa14.37□□□□□ -0.11
BEST3-201ENST00000266661 DHX8Q14562 1220 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms