RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
SCAF11-201ENST00000266589 HPS5Q9UPZ3 1129 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 CDK5RAP2Q96SN8 1893 aa13.58□□□□□ -0.23
SCAF11-201ENST00000266589 HMGN5P82970 282 aaKnown RBP13.58□□□□□ -0.24
SCAF11-201ENST00000266589 GSE1Q14687 1217 aa13.58□□□□□ -0.24
SCAF11-201ENST00000266589 DOK7Q18PE1 504 aa13.58□□□□□ -0.24
SCAF11-201ENST00000266589 SKOR2Q2VWA4 1001 aaPredicted RBP13.58□□□□□ -0.24
SCAF11-201ENST00000266589 CDC37L1Q7L3B6 337 aa13.58□□□□□ -0.24
SCAF11-201ENST00000266589 FAM184AQ8NB25 1140 aa13.58□□□□□ -0.24
SCAF11-201ENST00000266589 SH3RF3Q8TEJ3 882 aaPredicted RBP13.58□□□□□ -0.24
SCAF11-201ENST00000266589 RTFDC1Q9BY42 306 aaPredicted RBP13.58□□□□□ -0.24
SCAF11-201ENST00000266589 LY9Q9HBG7 655 aa13.58□□□□□ -0.24
SCAF11-201ENST00000266589 SENP2Q9HC62 589 aa13.58□□□□□ -0.24
SCAF11-201ENST00000266589 ARPP21Q9UBL0 812 aaPredicted RBP13.58□□□□□ -0.24
SCAF11-201ENST00000266589 G3V3G9 751 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 IFIT3O14879 490 aaKnown RBP13.57□□□□□ -0.24
SCAF11-201ENST00000266589 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
SCAF11-201ENST00000266589 USP5P45974 858 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 DCAF8Q5TAQ9 597 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 NFXL1Q6ZNB6 911 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 ATP6V1DQ9Y5K8 247 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 TCHHQ07283 1943 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 DHX16O60231 1041 aaKnown RBP13.57□□□□□ -0.24
SCAF11-201ENST00000266589 LIFRP42702 1097 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 BTDP43251 543 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 PPP4CP60510 307 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 SART3Q15020 963 aaKnown RBP13.57□□□□□ -0.24
SCAF11-201ENST00000266589 APOA5Q6Q788 366 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 SLF2Q8IX21 1173 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 SLC16A10Q8TF71 515 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 ESR2Q92731 530 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 ZKSCAN3Q9BRR0 538 aa13.57□□□□□ -0.24
SCAF11-201ENST00000266589 PCP11498 1178 aaKnown RBP13.56□□□□□ -0.24
SCAF11-201ENST00000266589 EVX2Q03828 476 aa13.56□□□□□ -0.24
SCAF11-201ENST00000266589 SBK1Q52WX2 424 aa13.56□□□□□ -0.24
SCAF11-201ENST00000266589 SGMS1Q86VZ5 419 aa13.56□□□□□ -0.24
SCAF11-201ENST00000266589 CCDC125Q86Z20 511 aa13.56□□□□□ -0.24
SCAF11-201ENST00000266589 CERS3Q8IU89 383 aa13.56□□□□□ -0.24
SCAF11-201ENST00000266589 MTA3Q9BTC8 594 aa13.56□□□□□ -0.24
SCAF11-201ENST00000266589 KIF3AQ9Y496 699 aa13.56□□□□□ -0.24
SCAF11-201ENST00000266589 GPR75-ASB3A0A0A6YYF3 556 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 ERICH2A1L162 156 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 PPFIA3O75145 1194 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 USP17L8P0C7I0 530 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 CYP2D6P10635 497 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 METAP2P50579 478 aaKnown RBP eCLIP13.55□□□□□ -0.24
SCAF11-201ENST00000266589 ILDR2Q71H61 639 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 MICU3Q86XE3 530 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 GZF1Q9H116 711 aaPredicted RBP13.55□□□□□ -0.24
SCAF11-201ENST00000266589 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 MKRN1Q9UHC7 482 aaKnown RBP13.55□□□□□ -0.24
SCAF11-201ENST00000266589 DDX49Q9Y6V7 483 aaKnown RBP13.55□□□□□ -0.24
SCAF11-201ENST00000266589 CCDC69A6NI79 296 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 H3BQV1 296 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 CPLX1O14810 134 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 ZBTB43O43298 467 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 PRDM1O75626 825 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 SLC3A2P08195 630 aaKnown RBP13.55□□□□□ -0.24
SCAF11-201ENST00000266589 FGRP09769 529 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 RXRAP19793 462 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 DEKP35659 375 aaKnown RBP13.55□□□□□ -0.24
SCAF11-201ENST00000266589 WTAPQ15007 396 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 IFFO2Q5TF58 517 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 FERMT3Q86UX7 667 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 TGFBRAP1Q8WUH2 860 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 C7orf43Q8WVR3 580 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 FAM163AQ96GL9 167 aaPredicted RBP13.55□□□□□ -0.24
SCAF11-201ENST00000266589 UBAC1Q9BSL1 405 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 DBNDD1Q9H9R9 158 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 SLC12A7Q9Y666 1083 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 GAKO14976 1311 aa13.55□□□□□ -0.24
SCAF11-201ENST00000266589 FOCADQ5VW36 1801 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 KIF13BQ9NQT8 1826 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 DDX60LQ5H9U9 1706 aaKnown RBP13.54□□□□□ -0.24
SCAF11-201ENST00000266589 RANBP6O60518 1105 aaKnown RBP13.54□□□□□ -0.24
SCAF11-201ENST00000266589 KLHL40Q2TBA0 621 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 SLC4A8Q2Y0W8 1093 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 CERS5Q8N5B7 392 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 MYL10Q9BUA6 226 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 GDPD2Q9HCC8 539 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 CNPY2Q9Y2B0 182 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCAF11-201ENST00000266589 SUGT1Q9Y2Z0 365 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 SNED1Q8TER0 1413 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 ADAMTSL1Q8N6G6 1762 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 F8W031 263 aaPredicted RBP13.54□□□□□ -0.24
SCAF11-201ENST00000266589 FDPSP14324 419 aaKnown RBP13.54□□□□□ -0.24
SCAF11-201ENST00000266589 PLCG2P16885 1265 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 FOSBP53539 338 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 PODNQ7Z5L7 613 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 MXD3Q9BW11 206 aa13.54□□□□□ -0.24
SCAF11-201ENST00000266589 ZNF646O15015 1829 aaPredicted RBP13.54□□□□□ -0.24
SCAF11-201ENST00000266589 TNKSO95271 1327 aa13.53□□□□□ -0.24
SCAF11-201ENST00000266589 ECM29Q5VYK3 1845 aa13.53□□□□□ -0.24
SCAF11-201ENST00000266589 GOLGA8AA7E2F4 631 aa13.53□□□□□ -0.24
SCAF11-201ENST00000266589 ORC4O43929 436 aa13.53□□□□□ -0.24
SCAF11-201ENST00000266589 NCLP19338 710 aaKnown RBP13.53□□□□□ -0.24
SCAF11-201ENST00000266589 DNM1Q05193 864 aaKnown RBP13.53□□□□□ -0.24
SCAF11-201ENST00000266589 PDE4BQ07343 736 aa13.53□□□□□ -0.24
SCAF11-201ENST00000266589 C12orf60Q5U649 245 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms