RNA–Protein interactions for RNA: ENST00000265807.7

SH2D4A-201, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH2D4A, Length 3,352 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-201ENST00000265807 LIG1P18858 919 aa13.25□□□□□ -0.29
SH2D4A-201ENST00000265807 TMEM67Q5HYA8 995 aa13.25□□□□□ -0.29
SH2D4A-201ENST00000265807 SH3RF3Q8TEJ3 882 aaPredicted RBP13.25□□□□□ -0.29
SH2D4A-201ENST00000265807 MKRN1Q9UHC7 482 aaKnown RBP13.25□□□□□ -0.29
SH2D4A-201ENST00000265807 PDS5AQ29RF7 1337 aaKnown RBP13.25□□□□□ -0.29
SH2D4A-201ENST00000265807 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
SH2D4A-201ENST00000265807 PTMSP20962 102 aa13.24□□□□□ -0.29
SH2D4A-201ENST00000265807 RBM17Q96I25 401 aaKnown RBP13.24□□□□□ -0.29
SH2D4A-201ENST00000265807 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
SH2D4A-201ENST00000265807 TRDNQ13061 729 aa13.24□□□□□ -0.29
SH2D4A-201ENST00000265807 TOMM22Q9NS69 142 aa13.24□□□□□ -0.29
SH2D4A-201ENST00000265807 GNAT2P19087 354 aa13.24□□□□□ -0.29
SH2D4A-201ENST00000265807 SEC23AQ15436 765 aa13.24□□□□□ -0.29
SH2D4A-201ENST00000265807 FAM184AQ8NB25 1140 aa13.24□□□□□ -0.29
SH2D4A-201ENST00000265807 LEO1Q8WVC0 666 aaPredicted RBP13.24□□□□□ -0.29
SH2D4A-201ENST00000265807 ANAPC4Q9UJX5 808 aa13.24□□□□□ -0.29
SH2D4A-201ENST00000265807 DLEC1Q9Y238 1755 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 IFIT3O14879 490 aaKnown RBP13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 PDCP20941 246 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 SGMS1Q86VZ5 419 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 SCN9AQ15858 1988 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 IL1R1P14778 569 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 FAM47AQ5JRC9 791 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 C15orf52Q6ZUT6 534 aaKnown RBP13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 CCDC82Q8N4S0 544 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 DYNLL2Q96FJ2 89 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 USP28Q96RU2 1077 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 CRAMP1Q96RY5 1269 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 PODXL2Q9NZ53 605 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 GGA1Q9UJY5 639 aa13.23□□□□□ -0.29
SH2D4A-201ENST00000265807 H3BQV1 296 aa13.22□□□□□ -0.29
SH2D4A-201ENST00000265807 PPEF1O14829 653 aaPredicted RBP13.22□□□□□ -0.29
SH2D4A-201ENST00000265807 UBE2HP62256 183 aa13.22□□□□□ -0.29
SH2D4A-201ENST00000265807 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
SH2D4A-201ENST00000265807 CAMKK2Q96RR4 588 aa13.22□□□□□ -0.29
SH2D4A-201ENST00000265807 BRIP1Q9BX63 1249 aa13.22□□□□□ -0.29
SH2D4A-201ENST00000265807 METAP2P50579 478 aaKnown RBP eCLIP13.22□□□□□ -0.29
SH2D4A-201ENST00000265807 CERS5Q8N5B7 392 aa13.22□□□□□ -0.29
SH2D4A-201ENST00000265807 ENAHQ8N8S7 591 aaPredicted RBP13.22□□□□□ -0.29
SH2D4A-201ENST00000265807 NACAP1Q9BZK3 213 aa13.22□□□□□ -0.29
SH2D4A-201ENST00000265807 ZNF646O15015 1829 aaPredicted RBP13.22□□□□□ -0.29
SH2D4A-201ENST00000265807 BBOX1O75936 387 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 FGRP09769 529 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 CHRNA5P30532 468 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 L1TD1Q5T7N2 865 aaKnown RBP13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 RTFDC1Q9BY42 306 aaPredicted RBP13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 MYH6P13533 1939 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 C6orf229H3BNL8 230 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 POLR3DP05423 398 aaPredicted RBP13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 SLURP2P0DP57 97 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 LIFRP42702 1097 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 MRE11P49959 708 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 NBPF11Q86T75 865 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 NLGN1Q8N2Q7 840 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 SLC44A5Q8NCS7 719 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 TMEM87BQ96K49 555 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 DDX60LQ5H9U9 1706 aaKnown RBP13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 NAV1Q8NEY1 1877 aa13.21□□□□□ -0.29
SH2D4A-201ENST00000265807 MBD3O95983 291 aa13.21□□□□□ -0.3
SH2D4A-201ENST00000265807 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.3
SH2D4A-201ENST00000265807 PLCD1P51178 756 aa13.21□□□□□ -0.3
SH2D4A-201ENST00000265807 DOK7Q18PE1 504 aa13.21□□□□□ -0.3
SH2D4A-201ENST00000265807 LRSAM1Q6UWE0 723 aa13.21□□□□□ -0.3
SH2D4A-201ENST00000265807 DEFB132Q7Z7B7 95 aa13.21□□□□□ -0.3
SH2D4A-201ENST00000265807 DZIP1Q86YF9 867 aaKnown RBP13.21□□□□□ -0.3
SH2D4A-201ENST00000265807 ATP6V0A2Q9Y487 856 aa13.21□□□□□ -0.3
SH2D4A-201ENST00000265807 TNKSO95271 1327 aa13.21□□□□□ -0.3
SH2D4A-201ENST00000265807 hCG_1642624A0A1W2PR95 340 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 ZBTB43O43298 467 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 KRT85P78386 507 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 GIMAP6Q6P9H5 292 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 FBXO18Q8NFZ0 1043 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 PCDHAC2Q9Y5I4 1007 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 ZNF804AQ7Z570 1209 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 RNF214Q8ND24 703 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 CHMP4CQ96CF2 233 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 RGPD3A6NKT7 1758 aaPredicted RBP13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 RGPD4Q7Z3J3 1758 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 ADAMTS3O15072 1205 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 ATP2B4P23634 1241 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 RASGRP2Q7LDG7 609 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 SP8Q8IXZ3 490 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 SPATA32Q96LK8 384 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 KRT23Q9C075 422 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 ATP6V1DQ9Y5K8 247 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 CLIC4Q9Y696 253 aa13.2□□□□□ -0.3
SH2D4A-201ENST00000265807 TGFBRAP1Q8WUH2 860 aa13.19□□□□□ -0.3
SH2D4A-201ENST00000265807 GOLPH3LQ9H4A5 285 aa13.19□□□□□ -0.3
SH2D4A-201ENST00000265807 SAP30BPQ9UHR5 308 aaKnown RBP13.19□□□□□ -0.3
SH2D4A-201ENST00000265807 GOLGA8AA7E2F4 631 aa13.19□□□□□ -0.3
SH2D4A-201ENST00000265807 NR1I2O75469 434 aa13.19□□□□□ -0.3
SH2D4A-201ENST00000265807 GTF2IP78347 998 aa13.19□□□□□ -0.3
SH2D4A-201ENST00000265807 CAMK4Q16566 473 aa13.19□□□□□ -0.3
SH2D4A-201ENST00000265807 CNNM2Q9H8M5 875 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms