RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TSGA10IPQ3SY00 556 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 OGFOD1Q8N543 542 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 RASSF8Q8NHQ8 419 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 ZNF274Q96GC6 653 aaPredicted RBP10.85□□□□□ -0.67
SSR3-201ENST00000265044 TOGARAM1Q9Y4F4 1720 aa10.85□□□□□ -0.67
SSR3-201ENST00000265044 C21orf2O43822 256 aa10.84□□□□□ -0.67
SSR3-201ENST00000265044 KLHL40Q2TBA0 621 aa10.84□□□□□ -0.67
SSR3-201ENST00000265044 RTL9Q8NET4 1388 aa10.84□□□□□ -0.67
SSR3-201ENST00000265044 LAMB4A4D0S4 1761 aa10.84□□□□□ -0.67
SSR3-201ENST00000265044 PFKFB2O60825 505 aa10.84□□□□□ -0.67
SSR3-201ENST00000265044 HLA-DOAP06340 250 aa10.84□□□□□ -0.67
SSR3-201ENST00000265044 SP8Q8IXZ3 490 aa10.84□□□□□ -0.67
SSR3-201ENST00000265044 NSUN4Q96CB9 384 aaKnown RBP10.84□□□□□ -0.67
SSR3-201ENST00000265044 SDF4Q9BRK5 362 aa10.84□□□□□ -0.67
SSR3-201ENST00000265044 TCP10Q12799 353 aa10.84□□□□□ -0.67
SSR3-201ENST00000265044 CMTR1Q8N1G2 835 aaKnown RBP10.84□□□□□ -0.67
SSR3-201ENST00000265044 USP17L8P0C7I0 530 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 LLPHQ9BRT6 129 aaKnown RBP10.83□□□□□ -0.68
SSR3-201ENST00000265044 ZSCAN16Q9H4T2 348 aaPredicted RBP10.83□□□□□ -0.68
SSR3-201ENST00000265044 VAT1LQ9HCJ6 419 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 ATP8A2Q9NTI2 1148 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 NWD2Q9ULI1 1742 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 TM4SF1P30408 202 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 TFAP4Q01664 338 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 ARPP21Q9UBL0 812 aaPredicted RBP10.83□□□□□ -0.68
SSR3-201ENST00000265044 MTMR6Q9Y217 621 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 AK9Q5TCS8 1911 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 CAMK4Q16566 473 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 FBXO41Q8TF61 875 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 ATP6V0A2Q9Y487 856 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 TNKSO95271 1327 aa10.83□□□□□ -0.68
SSR3-201ENST00000265044 COL9A3Q14050 684 aaPredicted RBP10.82□□□□□ -0.68
SSR3-201ENST00000265044 JDP2Q8WYK2 163 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 COA1Q9GZY4 146 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 RTN4Q9NQC3 1192 aaKnown RBP10.82□□□□□ -0.68
SSR3-201ENST00000265044 USP40Q9NVE5 1235 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 POLLQ9UGP5 575 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 NEDD4P46934 1319 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 hCG_1642624A0A1W2PR95 340 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 KINO60870 393 aaKnown RBP10.82□□□□□ -0.68
SSR3-201ENST00000265044 SRGNP10124 158 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 APOA5Q6Q788 366 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 CYB5R4Q7L1T6 521 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 TEKT1Q969V4 418 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 MYH14Q7Z406 1995 aaKnown RBP10.82□□□□□ -0.68
SSR3-201ENST00000265044 MARCH6O60337 910 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 KIF5BP33176 963 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 MRE11P49959 708 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 UBE2HP62256 183 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 RBM26Q5T8P6 1007 aaKnown RBP10.82□□□□□ -0.68
SSR3-201ENST00000265044 TTC6Q86TZ1 520 aa10.82□□□□□ -0.68
SSR3-201ENST00000265044 SH3RF3Q8TEJ3 882 aaPredicted RBP10.82□□□□□ -0.68
SSR3-201ENST00000265044 EPB41L4AQ9HCS5 686 aaPredicted RBP10.82□□□□□ -0.68
SSR3-201ENST00000265044 CYP2D6P10635 497 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 EIF6P56537 245 aaKnown RBP10.81□□□□□ -0.68
SSR3-201ENST00000265044 HOMER1Q86YM7 354 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 VEZTQ9HBM0 779 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 BCS1LQ9Y276 419 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 SASS6Q6UVJ0 657 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 ADGRA1Q86SQ6 560 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 MB21D2Q8IYB1 491 aaPredicted RBP10.81□□□□□ -0.68
SSR3-201ENST00000265044 ZNF654Q8IZM8 581 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 TTLL6Q8N841 843 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 NSUN7Q8NE18 718 aaKnown RBP10.81□□□□□ -0.68
SSR3-201ENST00000265044 KCNB2Q92953 911 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 DYNLL2Q96FJ2 89 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 DCP1AQ9NPI6 582 aaPredicted RBP10.81□□□□□ -0.68
SSR3-201ENST00000265044 LMBRD1Q9NUN5 540 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 ZDHHC9Q9Y397 364 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 RPAP1Q9BWH6 1393 aaPredicted RBP10.81□□□□□ -0.68
SSR3-201ENST00000265044 NASPP49321 788 aaPredicted RBP10.81□□□□□ -0.68
SSR3-201ENST00000265044 TDRD7Q8NHU6 1098 aaKnown RBP10.81□□□□□ -0.68
SSR3-201ENST00000265044 TNMDQ9H2S6 317 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 BRPF3Q9ULD4 1205 aa10.81□□□□□ -0.68
SSR3-201ENST00000265044 NLRP5P59047 1200 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 EXOSC10Q01780 885 aaKnown RBP10.8□□□□□ -0.68
SSR3-201ENST00000265044 ALX1Q15699 326 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 SLC51AQ86UW1 340 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 JMYQ8N9B5 988 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 SUPT20HQ8NEM7 779 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 ZSCAN10Q96SZ4 725 aaPredicted RBP10.8□□□□□ -0.68
SSR3-201ENST00000265044 HDAC9Q9UKV0 1011 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 NUP98P52948 1817 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 PNPLA7Q6ZV29 1317 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 GADD45BO75293 160 aaPredicted RBP10.8□□□□□ -0.68
SSR3-201ENST00000265044 GRPEL1Q9HAV7 217 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 TCRBV5S4A2TA0A5A2 114 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 SH2B2O14492 632 aaPredicted RBP10.8□□□□□ -0.68
SSR3-201ENST00000265044 AOC3Q16853 763 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 CCDC96Q2M329 555 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 DRC7Q8IY82 874 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 CCDC34Q96HJ3 373 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 MXD3Q9BW11 206 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 NUP62CLQ9H1M0 184 aa10.8□□□□□ -0.68
SSR3-201ENST00000265044 V9GY48 417 aaPredicted RBP10.8□□□□□ -0.68
SSR3-201ENST00000265044 GLI3P10071 1580 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 RAD17O75943 681 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 SOGA3Q5TF21 947 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 CERS3Q8IU89 383 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 ANO8Q9HCE9 1232 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms