RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 ADCY9O60503 1353 aa18.42■□□□□ 0.54
GPC1-201ENST00000264039 UNC13BO14795 1591 aa18.42■□□□□ 0.54
GPC1-201ENST00000264039 A0A1W2PQ27 194 aa18.41■□□□□ 0.54
GPC1-201ENST00000264039 A0A1W2PQ64 194 aa18.41■□□□□ 0.54
GPC1-201ENST00000264039 A0A1W2PQD8 194 aa18.41■□□□□ 0.54
GPC1-201ENST00000264039 IKBKBO14920 756 aa18.41■□□□□ 0.54
GPC1-201ENST00000264039 CDC25AP30304 524 aa18.41■□□□□ 0.54
GPC1-201ENST00000264039 NCOA7Q8NI08 942 aa18.41■□□□□ 0.54
GPC1-201ENST00000264039 PPANQ9NQ55 473 aaKnown RBP18.41■□□□□ 0.54
GPC1-201ENST00000264039 MYOM2P54296 1465 aa18.41■□□□□ 0.54
GPC1-201ENST00000264039 TRIM21P19474 475 aaKnown RBP18.41■□□□□ 0.54
GPC1-201ENST00000264039 STOX1Q6ZVD7 989 aa18.41■□□□□ 0.54
GPC1-201ENST00000264039 CEP83Q9Y592 693 aa18.41■□□□□ 0.54
GPC1-201ENST00000264039 KRI1Q8N9T8 703 aaKnown RBP18.41■□□□□ 0.54
GPC1-201ENST00000264039 LINS1Q8NG48 757 aa18.41■□□□□ 0.54
GPC1-201ENST00000264039 XAGE3Q8WTP9 111 aa18.41■□□□□ 0.54
GPC1-201ENST00000264039 IFIT3O14879 490 aaKnown RBP18.4■□□□□ 0.54
GPC1-201ENST00000264039 TNNI3KQ59H18 835 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 N4BP2L2Q92802 583 aaPredicted RBP18.4■□□□□ 0.54
GPC1-201ENST00000264039 ZKSCAN3Q9BRR0 538 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 CEP126Q9P2H0 1117 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 TFR2Q9UP52 801 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 FPGT-TNNI3KV9GXZ4 949 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 LRRIQ3A6PVS8 624 aaPredicted RBP18.4■□□□□ 0.54
GPC1-201ENST00000264039 KIRREL3Q8IZU9 778 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 LRRC59Q96AG4 307 aaKnown RBP18.4■□□□□ 0.54
GPC1-201ENST00000264039 hCG_1642624A0A1W2PR95 340 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 IFT88Q13099 833 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 MICALCLQ6ZW33 695 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 TAX1BP1Q86VP1 789 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 CNGA4Q8IV77 575 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 CTNND2Q9UQB3 1225 aa18.4■□□□□ 0.54
GPC1-201ENST00000264039 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.4■□□□□ 0.54
GPC1-201ENST00000264039 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.54
GPC1-201ENST00000264039 SLC7A5Q01650 507 aa18.39■□□□□ 0.54
GPC1-201ENST00000264039 SPA17Q15506 151 aa18.39■□□□□ 0.54
GPC1-201ENST00000264039 CALRP27797 417 aaKnown RBP18.39■□□□□ 0.53
GPC1-201ENST00000264039 PDE4BQ07343 736 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 PLEKHO1Q53GL0 409 aaPredicted RBP18.39■□□□□ 0.53
GPC1-201ENST00000264039 TMEM67Q5HYA8 995 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 SLC12A7Q9Y666 1083 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 SAR1BQ9Y6B6 198 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 MYO1FO00160 1098 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 HGSO14964 777 aaPredicted RBP18.39■□□□□ 0.53
GPC1-201ENST00000264039 PAFAH1B1P43034 410 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 IQCEQ6IPM2 695 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 BLZF1Q9H2G9 400 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 C19orf44Q9H6X5 657 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 KAT14Q9H8E8 782 aa18.39■□□□□ 0.53
GPC1-201ENST00000264039 TTF2Q9UNY4 1162 aaKnown RBP18.39■□□□□ 0.53
GPC1-201ENST00000264039 CTDNEP1O95476 244 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 CCDC121Q6ZUS5 278 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 PLIN2Q99541 437 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 TULP4Q9NRJ4 1543 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 CEP85LQ5SZL2 805 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 FCHSD1Q86WN1 690 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 TRIM10Q9UDY6 481 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 ZBTB43O43298 467 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 HSPD1P10809 573 aaKnown RBP18.38■□□□□ 0.53
GPC1-201ENST00000264039 EZRP15311 586 aaKnown RBP18.38■□□□□ 0.53
GPC1-201ENST00000264039 HNRNPH1P31943 449 aaKnown RBP18.38■□□□□ 0.53
GPC1-201ENST00000264039 CXCR5P32302 372 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 GUCY2FP51841 1108 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 SSRP1Q08945 709 aaKnown RBP18.38■□□□□ 0.53
GPC1-201ENST00000264039 NCAPHQ15003 741 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 RAD9BQ6WBX8 426 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 TC2NQ8N9U0 490 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 TBC1D31Q96DN5 1066 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 CABP5Q9NP86 173 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 ADGRG1Q9Y653 693 aa18.38■□□□□ 0.53
GPC1-201ENST00000264039 KIF28PB7ZC32 967 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 ALDH1L1O75891 902 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 LRCH2Q5VUJ6 765 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 L1RE1Q9UN81 338 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 FAM170AA1A519 330 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 BTBD18B2RXH4 712 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 OPA1O60313 960 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 ODF2LQ9ULJ1 636 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 E7EVH7 732 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 MYO1BO43795 1136 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 SLC39A14Q15043 492 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 ZNF594Q96JF6 807 aaPredicted RBP18.37■□□□□ 0.53
GPC1-201ENST00000264039 CABS1Q96KC9 395 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 ANKZF1Q9H8Y5 726 aa18.37■□□□□ 0.53
GPC1-201ENST00000264039 B4E1Z4 1266 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 C2orf54Q08AI8 447 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 WHAMMP3Q1A5X7 153 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 TANGO6Q9C0B7 1094 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 CCDC113Q9H0I3 377 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 LUC7L2Q9Y383 392 aaKnown RBP18.36■□□□□ 0.53
GPC1-201ENST00000264039 POGZQ7Z3K3 1410 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 SYNRGQ9UMZ2 1314 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 FMR1Q06787 632 aaKnown RBP eCLIP18.36■□□□□ 0.53
GPC1-201ENST00000264039 CFAP58Q5T655 872 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 ANKRD13CQ8N6S4 541 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 KBTBD3Q8NAB2 608 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 MLKLQ8NB16 471 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 POLR3EQ9NVU0 708 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms