RNA–Protein interactions for RNA: ENST00000263233.8

SYP-201, Transcript of synaptophysin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYP, Length 2,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-201ENST00000263233 CCDC66A2RUB6 948 aa17.15■□□□□ 0.34
SYP-201ENST00000263233 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
SYP-201ENST00000263233 MDM2Q00987 491 aaPredicted RBP17.15■□□□□ 0.34
SYP-201ENST00000263233 SLC9C2Q5TAH2 1124 aa17.15■□□□□ 0.34
SYP-201ENST00000263233 CREBRFQ8IUR6 639 aa17.15■□□□□ 0.34
SYP-201ENST00000263233 IGDCC4Q8TDY8 1250 aa17.15■□□□□ 0.34
SYP-201ENST00000263233 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
SYP-201ENST00000263233 FAM217BQ9NTX9 383 aaPredicted RBP17.15■□□□□ 0.34
SYP-201ENST00000263233 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
SYP-201ENST00000263233 ATRNO75882 1429 aa17.15■□□□□ 0.34
SYP-201ENST00000263233 CSF1RP07333 972 aa17.14■□□□□ 0.34
SYP-201ENST00000263233 ERICH4A6NGS2 130 aa17.14■□□□□ 0.33
SYP-201ENST00000263233 ZBTB43O43298 467 aa17.14■□□□□ 0.33
SYP-201ENST00000263233 IFIT5Q13325 482 aaKnown RBP17.14■□□□□ 0.33
SYP-201ENST00000263233 HSP90AA4PQ58FG1 418 aa17.14■□□□□ 0.33
SYP-201ENST00000263233 SPECC1Q5M775 1068 aa17.14■□□□□ 0.33
SYP-201ENST00000263233 CADPS2Q86UW7 1296 aa17.14■□□□□ 0.33
SYP-201ENST00000263233 FAM177A1Q8N128 213 aaPredicted RBP17.14■□□□□ 0.33
SYP-201ENST00000263233 MYL10Q9BUA6 226 aa17.14■□□□□ 0.33
SYP-201ENST00000263233 PLA2G12BQ9BX93 195 aa17.14■□□□□ 0.33
SYP-201ENST00000263233 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
SYP-201ENST00000263233 ERVV-2B6SEH9 535 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 APPP05067 770 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 TRIM29Q14134 588 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 TMEM87BQ96K49 555 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 BAG1Q99933 345 aaPredicted RBP17.13■□□□□ 0.33
SYP-201ENST00000263233 LY9Q9HBG7 655 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 PIH1D3Q9NQM4 214 aaKnown RBP17.13■□□□□ 0.33
SYP-201ENST00000263233 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 GOLGA8AA7E2F4 631 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 PCCAP05165 728 aaPredicted RBP17.13■□□□□ 0.33
SYP-201ENST00000263233 METTL24Q5JXM2 366 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 ELOA2Q8IYF1 753 aaPredicted RBP17.13■□□□□ 0.33
SYP-201ENST00000263233 STK11IPQ8N1F8 1099 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 KRI1Q8N9T8 703 aaKnown RBP17.13■□□□□ 0.33
SYP-201ENST00000263233 WDR24Q96S15 920 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 MPHOSPH8Q99549 860 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 MAN1B1Q9UKM7 699 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 RIPOR2Q9Y4F9 1068 aa17.13■□□□□ 0.33
SYP-201ENST00000263233 SEC31AO94979 1220 aaKnown RBP17.12■□□□□ 0.33
SYP-201ENST00000263233 CYP2C19P33261 490 aa17.12■□□□□ 0.33
SYP-201ENST00000263233 NFXL1Q6ZNB6 911 aa17.12■□□□□ 0.33
SYP-201ENST00000263233 SGMS1Q86VZ5 419 aa17.12■□□□□ 0.33
SYP-201ENST00000263233 TC2NQ8N9U0 490 aa17.12■□□□□ 0.33
SYP-201ENST00000263233 ZCRB1Q8TBF4 217 aaKnown RBP17.12■□□□□ 0.33
SYP-201ENST00000263233 EPC1Q9H2F5 836 aa17.12■□□□□ 0.33
SYP-201ENST00000263233 INCENPQ9NQS7 918 aa17.12■□□□□ 0.33
SYP-201ENST00000263233 MYO5AQ9Y4I1 1855 aaKnown RBP17.12■□□□□ 0.33
SYP-201ENST00000263233 TPM1P09493 284 aa17.12■□□□□ 0.33
SYP-201ENST00000263233 MAP3K9P80192 1104 aa17.12■□□□□ 0.33
SYP-201ENST00000263233 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.33
SYP-201ENST00000263233 TRIM28Q13263 835 aaKnown RBP17.12■□□□□ 0.33
SYP-201ENST00000263233 UBE3CQ15386 1083 aa17.12■□□□□ 0.33
SYP-201ENST00000263233 ZNF532Q9HCE3 1301 aa17.12■□□□□ 0.33
SYP-201ENST00000263233 STX10O60499 249 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 ZNF18P17022 549 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 CASQ1P31415 396 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 GRIN1Q05586 938 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 TOGARAM2Q6ZUX3 1019 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 PDILTQ8N807 584 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 SLC26A6Q9BXS9 759 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 IDH1O75874 414 aaKnown RBP17.11■□□□□ 0.33
SYP-201ENST00000263233 PRR29P0C7W0 189 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 TOB1P50616 345 aaPredicted RBP17.11■□□□□ 0.33
SYP-201ENST00000263233 ADKP55263 362 aaKnown RBP17.11■□□□□ 0.33
SYP-201ENST00000263233 GNG11P61952 73 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 POSTNQ15063 836 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 TMEM67Q5HYA8 995 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 NOSTRINQ8IVI9 506 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 SYNE4Q8N205 404 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 ZBTB38Q8NAP3 1195 aaPredicted RBP17.11■□□□□ 0.33
SYP-201ENST00000263233 ZNF512BQ96KM6 892 aaPredicted RBP17.11■□□□□ 0.33
SYP-201ENST00000263233 ZNF330Q9Y3S2 320 aaPredicted RBP17.11■□□□□ 0.33
SYP-201ENST00000263233 NFE2L3Q9Y4A8 694 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 STK36Q9NRP7 1315 aa17.11■□□□□ 0.33
SYP-201ENST00000263233 GOLGA6L9A6NEM1 432 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 SSRP1Q08945 709 aaKnown RBP17.1■□□□□ 0.33
SYP-201ENST00000263233 TTF1Q15361 905 aaPredicted RBP17.1■□□□□ 0.33
SYP-201ENST00000263233 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 SPECC1LQ69YQ0 1117 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 MRFAP1Q9Y605 127 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 MAP3K15Q6ZN16 1313 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 TNS2Q63HR2 1409 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 BTBD18B2RXH4 712 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 FMNL1O95466 1100 aaPredicted RBP17.1■□□□□ 0.33
SYP-201ENST00000263233 SARSP49591 514 aaKnown RBP17.1■□□□□ 0.33
SYP-201ENST00000263233 LDHAL6AQ6ZMR3 332 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 KIFC2Q96AC6 838 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 PODXL2Q9NZ53 605 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 HOOK1Q9UJC3 728 aaKnown RBP17.1■□□□□ 0.33
SYP-201ENST00000263233 FBXO2Q9UK22 296 aaPredicted RBP17.1■□□□□ 0.33
SYP-201ENST00000263233 WWC3Q9ULE0 1092 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 TNS3Q68CZ2 1445 aa17.1■□□□□ 0.33
SYP-201ENST00000263233 ATP8B1O43520 1251 aa17.09■□□□□ 0.33
SYP-201ENST00000263233 PDE6AP16499 860 aa17.09■□□□□ 0.33
SYP-201ENST00000263233 GUCY1A2P33402 732 aa17.09■□□□□ 0.33
SYP-201ENST00000263233 TRMT44Q8IYL2 757 aaKnown RBP17.09■□□□□ 0.33
SYP-201ENST00000263233 ENOX1Q8TC92 643 aaKnown RBP17.09■□□□□ 0.33
SYP-201ENST00000263233 UBXN6Q9BZV1 441 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms