RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ZFYP08048 801 aaPredicted RBP10.52□□□□□ -0.73
MSH4-201ENST00000263187 BMP6P22004 513 aa10.52□□□□□ -0.73
MSH4-201ENST00000263187 SEC31BQ9NQW1 1179 aa10.52□□□□□ -0.73
MSH4-201ENST00000263187 ZNF446Q9NWS9 450 aa10.52□□□□□ -0.73
MSH4-201ENST00000263187 RIPOR2Q9Y4F9 1068 aa10.52□□□□□ -0.73
MSH4-201ENST00000263187 UBN2Q6ZU65 1347 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 ANKRD18BA2A2Z9 1011 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 FANCGO15287 622 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 SEC31AO94979 1220 aaKnown RBP10.51□□□□□ -0.73
MSH4-201ENST00000263187 TOP1P11387 765 aaKnown RBP10.51□□□□□ -0.73
MSH4-201ENST00000263187 KARSQ15046 597 aaKnown RBP10.51□□□□□ -0.73
MSH4-201ENST00000263187 OLFM4Q6UX06 510 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 ZNF397Q8NF99 534 aaPredicted RBP10.51□□□□□ -0.73
MSH4-201ENST00000263187 OXER1Q8TDS5 423 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 OSBPL5Q9H0X9 879 aaPredicted RBP10.51□□□□□ -0.73
MSH4-201ENST00000263187 ARFGEF2Q9Y6D5 1785 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 ZMYM6O95789 1325 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 PRDM1O75626 825 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 AFMP43652 599 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 TDO2P48775 406 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 CPLX2Q6PUV4 134 aaKnown RBP10.51□□□□□ -0.73
MSH4-201ENST00000263187 ZBTB38Q8NAP3 1195 aaPredicted RBP10.51□□□□□ -0.73
MSH4-201ENST00000263187 FEZ1Q99689 392 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 ZBTB1Q9Y2K1 713 aa10.51□□□□□ -0.73
MSH4-201ENST00000263187 POLR3GO15318 223 aaPredicted RBP10.5□□□□□ -0.73
MSH4-201ENST00000263187 MYL5Q02045 173 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 FMR1Q06787 632 aaKnown RBP eCLIP10.5□□□□□ -0.73
MSH4-201ENST00000263187 SMYD4Q8IYR2 804 aaPredicted RBP10.5□□□□□ -0.73
MSH4-201ENST00000263187 ERO1AQ96HE7 468 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 TRERF1Q96PN7 1200 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.5□□□□□ -0.73
MSH4-201ENST00000263187 CARD6Q9BX69 1037 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 IRX2Q9BZI1 471 aaPredicted RBP10.5□□□□□ -0.73
MSH4-201ENST00000263187 EPB41L4AQ9HCS5 686 aaPredicted RBP10.5□□□□□ -0.73
MSH4-201ENST00000263187 FAM217BQ9NTX9 383 aaPredicted RBP10.5□□□□□ -0.73
MSH4-201ENST00000263187 ABCF2Q9UG63 623 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 SERTAD1Q9UHV2 236 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 SCN11AQ9UI33 1791 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 SPATA31A3Q5VYP0 1347 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 BCAMP50895 628 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 EVCP57679 992 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 SSRP1Q08945 709 aaKnown RBP10.5□□□□□ -0.73
MSH4-201ENST00000263187 PTPAQ15257 358 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 NLRP10Q86W26 655 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 DIS3L2Q8IYB7 885 aaKnown RBP10.5□□□□□ -0.73
MSH4-201ENST00000263187 CCDC150Q8NCX0 1101 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 SDR42E1Q8WUS8 393 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 LY9Q9HBG7 655 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 PCDHB6Q9Y5E3 794 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 ERVV-2B6SEH9 535 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 PCCAP05165 728 aaPredicted RBP10.5□□□□□ -0.73
MSH4-201ENST00000263187 IGDCC4Q8TDY8 1250 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 CABP5Q9NP86 173 aa10.5□□□□□ -0.73
MSH4-201ENST00000263187 SAMSN1Q9NSI8 373 aaKnown RBP10.5□□□□□ -0.73
MSH4-201ENST00000263187 WDR17Q8IZU2 1322 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 COL18A1P39060 1754 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 CYP2D7A0A087X1C5 515 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 A0A0U1RQJ8 604 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 NRDCO43847 1150 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 CTSWP56202 376 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 MTF1Q14872 753 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 IFNL3Q8IZI9 196 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 MNS1Q8NEH6 495 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 ATRIPQ8WXE1 791 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 STRBPQ96SI9 672 aaKnown RBP10.49□□□□□ -0.73
MSH4-201ENST00000263187 MAP3K14Q99558 947 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 GTPBP4Q9BZE4 634 aaKnown RBP10.49□□□□□ -0.73
MSH4-201ENST00000263187 BAZ2BQ9UIF8 2168 aaKnown RBP10.49□□□□□ -0.73
MSH4-201ENST00000263187 PDE8BO95263 885 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 GNG11P61952 73 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 RASGRF1Q13972 1273 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 KRBA2Q6ZNG9 492 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 TOGARAM2Q6ZUX3 1019 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 KLHL34Q8N239 644 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 LCORLQ8N3X6 602 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 INTS13Q9NVM9 706 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 NFE2L3Q9Y4A8 694 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.49□□□□□ -0.73
MSH4-201ENST00000263187 SLC4A4Q9Y6R1 1079 aa10.49□□□□□ -0.73
MSH4-201ENST00000263187 STARD3NLO95772 234 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 TOB1P50616 345 aaPredicted RBP10.48□□□□□ -0.73
MSH4-201ENST00000263187 CLCN6P51797 869 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 NTRK3Q16288 839 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 NOM1Q5C9Z4 860 aaKnown RBP10.48□□□□□ -0.73
MSH4-201ENST00000263187 KRT222Q8N1A0 295 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 DHX58Q96C10 678 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 WDR24Q96S15 920 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 ATG3Q9NT62 314 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 IMPACTQ9P2X3 320 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 MTMR7Q9Y216 660 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 TFRCP02786 760 aaKnown RBP10.48□□□□□ -0.73
MSH4-201ENST00000263187 UTP14CQ5TAP6 766 aaKnown RBP10.48□□□□□ -0.73
MSH4-201ENST00000263187 MFSD6Q6ZSS7 791 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 SMIM5Q71RC9 77 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 JMYQ8N9B5 988 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 UBXN4Q92575 508 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 SLC4A9Q96Q91 983 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 LZTFL1Q9NQ48 299 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 VPS54Q9P1Q0 977 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 JAG2Q9Y219 1238 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms