RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 CCDC102AQ96A19 550 aa15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 NDC80O14777 642 aa15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 DEXIO95424 95 aa15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 CERKLQ49MI3 558 aaPredicted RBP15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 TIMM10P62072 90 aa15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 MCTP2Q6DN12 878 aa15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 ISM2Q6H9L7 571 aa15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 LRFN2Q9ULH4 789 aa15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 SLU7O95391 586 aaKnown RBP15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 TMC6Q7Z403 805 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 PPP1R14CQ8TAE6 165 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 MAP3K15Q6ZN16 1313 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 KRT24Q2M2I5 525 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 TTLL6Q8N841 843 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 MRPS27Q92552 414 aaKnown RBP15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 TMEM110-MUSTN1A8MSY1 372 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 B4E1Z4 1266 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 CYLC1P35663 651 aaPredicted RBP15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 GSTA5Q7RTV2 222 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 NOX5Q96PH1 765 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 LEMD3Q9Y2U8 911 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 ELMSAN1Q6PJG2 1045 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 KRT25Q7Z3Z0 450 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 FNBP4Q8N3X1 1017 aaPredicted RBP15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 METTL13Q8N6R0 699 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 ZBTB38Q8NAP3 1195 aaPredicted RBP15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 NPR1P16066 1061 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 BRAPQ7Z569 592 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 TSPYL6Q8N831 410 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 BBXQ8WY36 941 aaPredicted RBP15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 SELENOOQ9BVL4 669 aa15.28■□□□□ 0.04
PDGFRB-201ENST00000261799 ERBB4Q15303 1308 aa15.27■□□□□ 0.04
PDGFRB-201ENST00000261799 ZSCAN22P10073 491 aaPredicted RBP15.27■□□□□ 0.04
PDGFRB-201ENST00000261799 ALAS1P13196 640 aa15.27■□□□□ 0.04
PDGFRB-201ENST00000261799 P4HA1P13674 534 aa15.27■□□□□ 0.04
PDGFRB-201ENST00000261799 GOLGA6L9A6NEM1 432 aa15.27■□□□□ 0.04
PDGFRB-201ENST00000261799 PRPF6O94906 941 aaKnown RBP15.27■□□□□ 0.04
PDGFRB-201ENST00000261799 PPP1R2P41236 205 aa15.27■□□□□ 0.04
PDGFRB-201ENST00000261799 BTDP43251 543 aa15.27■□□□□ 0.04
PDGFRB-201ENST00000261799 CIAPIN1Q6FI81 312 aa15.27■□□□□ 0.04
PDGFRB-201ENST00000261799 KIAA1524Q8TCG1 905 aa15.27■□□□□ 0.04
PDGFRB-201ENST00000261799 WDR17Q8IZU2 1322 aa15.27■□□□□ 0.03
PDGFRB-201ENST00000261799 MARCKSP29966 332 aaPredicted RBP15.27■□□□□ 0.03
PDGFRB-201ENST00000261799 FAM160B1Q5W0V3 765 aa15.27■□□□□ 0.03
PDGFRB-201ENST00000261799 RNF169Q8NCN4 708 aa15.27■□□□□ 0.03
PDGFRB-201ENST00000261799 NEK11Q8NG66 645 aa15.27■□□□□ 0.03
PDGFRB-201ENST00000261799 NEMFO60524 1076 aa15.27■□□□□ 0.03
PDGFRB-201ENST00000261799 BBOX1O75936 387 aa15.27■□□□□ 0.03
PDGFRB-201ENST00000261799 UBE4AQ14139 1066 aa15.27■□□□□ 0.03
PDGFRB-201ENST00000261799 GRPEL1Q9HAV7 217 aa15.27■□□□□ 0.03
PDGFRB-201ENST00000261799 HECW2Q9P2P5 1572 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 RXRAP19793 462 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 ARID5AQ03989 594 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 ERFEQ4G0M1 354 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 SLC10A4Q96EP9 437 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 FLOT1O75955 427 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 MTERF4Q7Z6M4 381 aaKnown RBP15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 NSMCE1Q8WV22 266 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 SUCLG2Q96I99 432 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 RTL1A6NKG5 1358 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 GPAA1O43292 621 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 DCAF17Q5H9S7 520 aaPredicted RBP15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 ZNF804BA4D1E1 1349 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 TESPA1A2RU30 521 aaPredicted RBP15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 EIF4A1P60842 406 aaKnown RBP15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 HLTFQ14527 1009 aaKnown RBP eCLIP15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 CAVIN2O95810 425 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 TCEANC2Q96MN5 208 aa15.26■□□□□ 0.03
PDGFRB-201ENST00000261799 ADGBQ8N7X0 1667 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 ATF7P17544 494 aaPredicted RBP15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 FAM182BQ5T319 152 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 ZNF532Q9HCE3 1301 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 DAPK3O43293 454 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 IL6STP40189 918 aaPredicted RBP15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 PTPN14Q15678 1187 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 MIER3Q7Z3K6 550 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 ZBTB8OSQ8IWT0 167 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 RAB3IL1Q8TBN0 382 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 CTDSPL2Q05D32 466 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 PPP2R5BQ15173 497 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 NONOQ15233 471 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 RTEL1Q9NZ71 1219 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 NOC2LQ9Y3T9 749 aaKnown RBP15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 ADGRL2O95490 1459 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 ATP2A1O14983 1001 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 SPTLC2O15270 562 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 MCM4P33991 863 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 YARSP54577 528 aaKnown RBP15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 UBE2HP62256 183 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 ZNF174Q15697 407 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 RUFY3Q7L099 469 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 UBXN4Q92575 508 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 USP19O94966 1318 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 ABCA8O94911 1581 aa15.25■□□□□ 0.03
PDGFRB-201ENST00000261799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 ABI1Q8IZP0 508 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 IQUBQ8NA54 791 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms