RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 STRBPQ96SI9 672 aaKnown RBP20.75■□□□□ 0.91
SRSF1-201ENST00000258962 FOXD4L1Q9NU39 408 aa20.75■□□□□ 0.91
SRSF1-201ENST00000258962 PITPNM2Q9BZ72 1349 aa20.75■□□□□ 0.91
SRSF1-201ENST00000258962 HDLBPQ00341 1268 aaKnown RBP20.74■□□□□ 0.91
SRSF1-201ENST00000258962 KRT32Q14532 448 aa20.74■□□□□ 0.91
SRSF1-201ENST00000258962 NOL8Q76FK4 1167 aaKnown RBP20.74■□□□□ 0.91
SRSF1-201ENST00000258962 ZGPATQ8N5A5 531 aaKnown RBP20.74■□□□□ 0.91
SRSF1-201ENST00000258962 ZBED3Q96IU2 234 aaPredicted RBP20.74■□□□□ 0.91
SRSF1-201ENST00000258962 ZNF408Q9H9D4 720 aa20.74■□□□□ 0.91
SRSF1-201ENST00000258962 SPDYE2BA6NHP3 402 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 ADM5C9JUS6 153 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 MBD4O95243 580 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 CELF2O95319 508 aaKnown RBP20.73■□□□□ 0.91
SRSF1-201ENST00000258962 LDHBP07195 334 aaKnown RBP20.73■□□□□ 0.91
SRSF1-201ENST00000258962 SPDYE6P0CI01 402 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 GRIK5Q16478 980 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 ADGRA1Q86SQ6 560 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 ZNF384Q8TF68 577 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 TEKT1Q969V4 418 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 PDRG1Q9NUG6 133 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 RAI14Q9P0K7 980 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 FGAP02671 866 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 HSP90AA1P07900 732 aaKnown RBP20.73■□□□□ 0.91
SRSF1-201ENST00000258962 RPS6KB1P23443 525 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 CRKP46108 304 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 CUL4AQ13619 759 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 BLOC1S2Q6QNY1 142 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 AIDAQ96BJ3 306 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 PRMT6Q96LA8 375 aaPredicted RBP20.73■□□□□ 0.91
SRSF1-201ENST00000258962 MRIQ9BWK5 157 aa20.73■□□□□ 0.91
SRSF1-201ENST00000258962 ABT1Q9ULW3 272 aaKnown RBP20.73■□□□□ 0.91
SRSF1-201ENST00000258962 POLR2AP24928 1970 aaKnown RBP20.73■□□□□ 0.91
SRSF1-201ENST00000258962 CYP7A1P22680 504 aa20.72■□□□□ 0.91
SRSF1-201ENST00000258962 SPTY2D1Q68D10 685 aaPredicted RBP20.72■□□□□ 0.91
SRSF1-201ENST00000258962 APOBEC3FQ8IUX4 373 aaKnown RBP20.72■□□□□ 0.91
SRSF1-201ENST00000258962 ARMT1Q9H993 441 aa20.72■□□□□ 0.91
SRSF1-201ENST00000258962 CHMP5Q9NZZ3 219 aa20.72■□□□□ 0.91
SRSF1-201ENST00000258962 CTNNA3Q9UI47 895 aa20.72■□□□□ 0.91
SRSF1-201ENST00000258962 SALL1Q9NSC2 1324 aa20.72■□□□□ 0.91
SRSF1-201ENST00000258962 CST9Q5W186 159 aa20.71■□□□□ 0.91
SRSF1-201ENST00000258962 LCORLQ8N3X6 602 aa20.71■□□□□ 0.91
SRSF1-201ENST00000258962 NEK1Q96PY6 1258 aa20.71■□□□□ 0.91
SRSF1-201ENST00000258962 PCDHAC2Q9Y5I4 1007 aa20.71■□□□□ 0.91
SRSF1-201ENST00000258962 DLK2Q6UY11 383 aa20.7■□□□□ 0.9
SRSF1-201ENST00000258962 MIGA1Q8NAN2 632 aa20.7■□□□□ 0.9
SRSF1-201ENST00000258962 SCAF8Q9UPN6 1271 aaKnown RBP20.7■□□□□ 0.9
SRSF1-201ENST00000258962 CLRN2A0PK11 232 aa20.69■□□□□ 0.9
SRSF1-201ENST00000258962 E7EWF7 191 aa20.69■□□□□ 0.9
SRSF1-201ENST00000258962 PRDX5P30044 214 aa20.69■□□□□ 0.9
SRSF1-201ENST00000258962 HHIPL2Q6UWX4 724 aa20.69■□□□□ 0.9
SRSF1-201ENST00000258962 NSUN4Q96CB9 384 aaKnown RBP20.69■□□□□ 0.9
SRSF1-201ENST00000258962 TCEANC2Q96MN5 208 aa20.69■□□□□ 0.9
SRSF1-201ENST00000258962 LARP6Q9BRS8 491 aaKnown RBP20.69■□□□□ 0.9
SRSF1-201ENST00000258962 ALDH8A1Q9H2A2 487 aaPredicted RBP20.69■□□□□ 0.9
SRSF1-201ENST00000258962 VEZTQ9HBM0 779 aa20.69■□□□□ 0.9
SRSF1-201ENST00000258962 EPB41L4AQ9HCS5 686 aaPredicted RBP20.69■□□□□ 0.9
SRSF1-201ENST00000258962 MECOMQ03112 1051 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 ALX1Q15699 326 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 IMMTQ16891 758 aaKnown RBP20.68■□□□□ 0.9
SRSF1-201ENST00000258962 NAA16Q6N069 864 aaPredicted RBP20.68■□□□□ 0.9
SRSF1-201ENST00000258962 DZIP1Q86YF9 867 aaKnown RBP20.68■□□□□ 0.9
SRSF1-201ENST00000258962 DNAJC5GQ8N7S2 189 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 CDCA5Q96FF9 252 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 ZDHHC15Q96MV8 337 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 TDRD3Q9H7E2 651 aaKnown RBP20.68■□□□□ 0.9
SRSF1-201ENST00000258962 CIZ1Q9ULV3 898 aaPredicted RBP20.68■□□□□ 0.9
SRSF1-201ENST00000258962 LIMCH1Q9UPQ0 1083 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 ZMYM6O95789 1325 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 PATL2C9JE40 543 aaKnown RBP20.68■□□□□ 0.9
SRSF1-201ENST00000258962 LARGE1O95461 756 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 HAND2P61296 217 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 SLF2Q8IX21 1173 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 C2orf69Q8N8R5 385 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 RIOK1Q9BRS2 568 aaKnown RBP20.68■□□□□ 0.9
SRSF1-201ENST00000258962 NBPF3Q9H094 633 aa20.68■□□□□ 0.9
SRSF1-201ENST00000258962 MAGEB6P1A0A0J9YX57 407 aa20.67■□□□□ 0.9
SRSF1-201ENST00000258962 GSG1L2A8MUP6 293 aa20.67■□□□□ 0.9
SRSF1-201ENST00000258962 PRKAB2O43741 272 aa20.67■□□□□ 0.9
SRSF1-201ENST00000258962 TNFAIP1Q13829 316 aa20.67■□□□□ 0.9
SRSF1-201ENST00000258962 TOB2Q14106 344 aaPredicted RBP20.67■□□□□ 0.9
SRSF1-201ENST00000258962 DEFB115Q30KQ5 88 aa20.67■□□□□ 0.9
SRSF1-201ENST00000258962 KLRG1Q96E93 195 aa20.67■□□□□ 0.9
SRSF1-201ENST00000258962 DEFB129Q9H1M3 183 aa20.67■□□□□ 0.9
SRSF1-201ENST00000258962 TMOD2Q9NZR1 351 aa20.67■□□□□ 0.9
SRSF1-201ENST00000258962 ZNF70Q9UC06 446 aaPredicted RBP20.67■□□□□ 0.9
SRSF1-201ENST00000258962 MKRN1Q9UHC7 482 aaKnown RBP20.67■□□□□ 0.9
SRSF1-201ENST00000258962 MYH2Q9UKX2 1941 aa20.67■□□□□ 0.9
SRSF1-201ENST00000258962 TRPM7Q96QT4 1865 aa20.67■□□□□ 0.9
SRSF1-201ENST00000258962 BAZ2AQ9UIF9 1905 aaKnown RBP20.66■□□□□ 0.9
SRSF1-201ENST00000258962 APPP05067 770 aa20.66■□□□□ 0.9
SRSF1-201ENST00000258962 GNAT2P19087 354 aa20.66■□□□□ 0.9
SRSF1-201ENST00000258962 NF2P35240 595 aa20.66■□□□□ 0.9
SRSF1-201ENST00000258962 SPDYE2Q495Y8 402 aa20.66■□□□□ 0.9
SRSF1-201ENST00000258962 IFNL3Q8IZI9 196 aa20.66■□□□□ 0.9
SRSF1-201ENST00000258962 GBA2Q9HCG7 927 aaPredicted RBP20.66■□□□□ 0.9
SRSF1-201ENST00000258962 HMGB1P09429 215 aaKnown RBP20.65■□□□□ 0.9
SRSF1-201ENST00000258962 DYNLL1P63167 89 aaKnown RBP20.65■□□□□ 0.9
SRSF1-201ENST00000258962 DIXDC1Q155Q3 683 aa20.65■□□□□ 0.9
SRSF1-201ENST00000258962 PRAMEF18Q5VWM3 479 aa20.65■□□□□ 0.9
SRSF1-201ENST00000258962 INTS4Q96HW7 963 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms