RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 SDR42E1Q8WUS8 393 aa19.2■□□□□ 0.66
UBQLN1-201ENST00000257468 BIN1O00499 593 aa19.19■□□□□ 0.66
UBQLN1-201ENST00000257468 GUCY1A2P33402 732 aa19.19■□□□□ 0.66
UBQLN1-201ENST00000257468 DPCR1Q3MIW9 517 aa19.19■□□□□ 0.66
UBQLN1-201ENST00000257468 CPLX2Q6PUV4 134 aaKnown RBP19.19■□□□□ 0.66
UBQLN1-201ENST00000257468 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.19■□□□□ 0.66
UBQLN1-201ENST00000257468 CMTR1Q8N1G2 835 aaKnown RBP19.19■□□□□ 0.66
UBQLN1-201ENST00000257468 CCDC82Q8N4S0 544 aa19.19■□□□□ 0.66
UBQLN1-201ENST00000257468 FAM13BQ9NYF5 915 aa19.19■□□□□ 0.66
UBQLN1-201ENST00000257468 COL1A1P02452 1464 aaPredicted RBP19.19■□□□□ 0.66
UBQLN1-201ENST00000257468 ZNF202O95125 648 aa19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 CYP7A1P22680 504 aa19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 LIFRP42702 1097 aa19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 KIAA1468Q9P260 1216 aa19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 COL5A3P25940 1745 aaPredicted RBP19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 ARID5BQ14865 1188 aa19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 SLC39A14Q15043 492 aa19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 PTF1AQ7RTS3 328 aa19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 CEP57L1Q8IYX8 460 aa19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 CACTINQ8WUQ7 758 aaKnown RBP19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 TSC1Q92574 1164 aa19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 PNPLA7Q6ZV29 1317 aa19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 CICQ96RK0 1608 aaPredicted RBP19.18■□□□□ 0.66
UBQLN1-201ENST00000257468 CASZ1Q86V15 1759 aa19.17■□□□□ 0.66
UBQLN1-201ENST00000257468 RRP9O43818 475 aaKnown RBP19.17■□□□□ 0.66
UBQLN1-201ENST00000257468 SARM1Q6SZW1 724 aa19.17■□□□□ 0.66
UBQLN1-201ENST00000257468 STAG1Q8WVM7 1258 aa19.17■□□□□ 0.66
UBQLN1-201ENST00000257468 NACAP1Q9BZK3 213 aa19.17■□□□□ 0.66
UBQLN1-201ENST00000257468 KRT23Q9C075 422 aa19.17■□□□□ 0.66
UBQLN1-201ENST00000257468 CNNM2Q9H8M5 875 aa19.17■□□□□ 0.66
UBQLN1-201ENST00000257468 CDC5LQ99459 802 aaKnown RBP19.17■□□□□ 0.66
UBQLN1-201ENST00000257468 RAI14Q9P0K7 980 aa19.17■□□□□ 0.66
UBQLN1-201ENST00000257468 ZNF652Q9Y2D9 606 aa19.17■□□□□ 0.66
UBQLN1-201ENST00000257468 A0A1B0GUL6 1792 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 MINDY4BA8MYZ0 360 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 SSRP1Q08945 709 aaKnown RBP19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 PTPAQ15257 358 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 FAM98CQ17RN3 349 aaKnown RBP19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 ISM2Q6H9L7 571 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 MYRIPQ8NFW9 859 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 CLIC6Q96NY7 704 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 MAP3K14Q99558 947 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 GNAT2P19087 354 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 CMA1P23946 247 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 TRIM29Q14134 588 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 WTAPQ15007 396 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 ANKRD18AQ8IVF6 992 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 KCNJ14Q9UNX9 436 aa19.16■□□□□ 0.66
UBQLN1-201ENST00000257468 ZNF804BA4D1E1 1349 aa19.15■□□□□ 0.66
UBQLN1-201ENST00000257468 SLC3A2P08195 630 aaKnown RBP19.15■□□□□ 0.66
UBQLN1-201ENST00000257468 CDC25BP30305 580 aa19.15■□□□□ 0.66
UBQLN1-201ENST00000257468 PPARAQ07869 468 aa19.15■□□□□ 0.66
UBQLN1-201ENST00000257468 SHC4Q6S5L8 630 aa19.15■□□□□ 0.66
UBQLN1-201ENST00000257468 FMNL1O95466 1100 aaPredicted RBP19.14■□□□□ 0.66
UBQLN1-201ENST00000257468 U2AF2P26368 475 aaKnown RBP eCLIP19.14■□□□□ 0.661e-8■■□□□ 12.4
UBQLN1-201ENST00000257468 CELF1Q92879 486 aaKnown RBP19.14■□□□□ 0.66
UBQLN1-201ENST00000257468 MRFAP1L1Q96HT8 127 aa19.14■□□□□ 0.66
UBQLN1-201ENST00000257468 CYP2D7A0A087X1C5 515 aa19.14■□□□□ 0.65
UBQLN1-201ENST00000257468 DYNC1I1O14576 645 aa19.14■□□□□ 0.65
UBQLN1-201ENST00000257468 KLRK1P26718 216 aa19.14■□□□□ 0.65
UBQLN1-201ENST00000257468 DYNLL1P63167 89 aaKnown RBP19.14■□□□□ 0.65
UBQLN1-201ENST00000257468 PIP4K2BP78356 416 aa19.14■□□□□ 0.65
UBQLN1-201ENST00000257468 BARGINQ6ZT62 677 aa19.14■□□□□ 0.65
UBQLN1-201ENST00000257468 CCDC24Q8N4L8 307 aa19.14■□□□□ 0.65
UBQLN1-201ENST00000257468 NUP133Q8WUM0 1156 aa19.14■□□□□ 0.65
UBQLN1-201ENST00000257468 SMARCC1Q92922 1105 aaPredicted RBP19.14■□□□□ 0.65
UBQLN1-201ENST00000257468 MAGEB6P1A0A0J9YX57 407 aa19.13■□□□□ 0.65
UBQLN1-201ENST00000257468 BTBD18B2RXH4 712 aa19.13■□□□□ 0.65
UBQLN1-201ENST00000257468 IFNAR1P17181 557 aa19.13■□□□□ 0.65
UBQLN1-201ENST00000257468 RTN1Q16799 776 aa19.13■□□□□ 0.65
UBQLN1-201ENST00000257468 TBC1D9BQ66K14 1250 aa19.13■□□□□ 0.65
UBQLN1-201ENST00000257468 STK36Q9NRP7 1315 aa19.13■□□□□ 0.65
UBQLN1-201ENST00000257468 ZRSR1Q15695 479 aaKnown RBP19.13■□□□□ 0.65
UBQLN1-201ENST00000257468 ZNF384Q8TF68 577 aa19.13■□□□□ 0.65
UBQLN1-201ENST00000257468 PRIMPOLQ96LW4 560 aa19.13■□□□□ 0.65
UBQLN1-201ENST00000257468 NAT10Q9H0A0 1025 aaKnown RBP19.13■□□□□ 0.65
UBQLN1-201ENST00000257468 MINPP1Q9UNW1 487 aa19.13■□□□□ 0.65
UBQLN1-201ENST00000257468 CACNA1SQ13698 1873 aa19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 SYKP43405 635 aa19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 SART3Q15020 963 aaKnown RBP19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 FILIP1Q7Z7B0 1213 aa19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 BAZ2AQ9UIF9 1905 aaKnown RBP19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 GTF2E1P29083 439 aaPredicted RBP19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 SPECC1Q5M775 1068 aa19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 CLEC4GQ6UXB4 293 aa19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 NBPF11Q86T75 865 aa19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 RIOK1Q9BRS2 568 aaKnown RBP19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 BCL2L12Q9HB09 334 aa19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 BSDC1Q9NW68 430 aaPredicted RBP19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 SRP68Q9UHB9 627 aaKnown RBP19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 HPSEQ9Y251 543 aa19.12■□□□□ 0.65
UBQLN1-201ENST00000257468 ERICH2A1L162 156 aa19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 PPP6R2O75170 966 aa19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 EVX2Q03828 476 aa19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 SF3B3Q15393 1217 aaKnown RBP19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 ZNF654Q8IZM8 581 aa19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 FAM84BQ96KN1 310 aaPredicted RBP19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 C16orf45Q96MC5 204 aaPredicted RBP19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 NID2Q14112 1375 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms