RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 NEDD4P46934 1319 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 ADD2P35612 726 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 ATL3Q6DD88 541 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 SYTL4Q96C24 671 aaPredicted RBP13.01□□□□□ -0.33
PDE6B-201ENST00000255622 MYL10Q9BUA6 226 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 ZBTB1Q9Y2K1 713 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 ABCA3Q99758 1704 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 B4E1Z4 1266 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 IRS4O14654 1257 aaPredicted RBP13.01□□□□□ -0.33
PDE6B-201ENST00000255622 STARD3NLO95772 234 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 MARCKSP29966 332 aaPredicted RBP13.01□□□□□ -0.33
PDE6B-201ENST00000255622 ISM2Q6H9L7 571 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 SARM1Q6SZW1 724 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 LRRC8AQ8IWT6 810 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 VGLL2Q8N8G2 317 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 ANO10Q9NW15 660 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 TRMT112Q9UI30 125 aaKnown RBP13.01□□□□□ -0.33
PDE6B-201ENST00000255622 TBC1D2BQ9UPU7 963 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 ZNF532Q9HCE3 1301 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 DDX60Q8IY21 1712 aaKnown RBP13.01□□□□□ -0.33
PDE6B-201ENST00000255622 MROH7-TTC4A0A0A0MT08 1334 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 SPTLC2O15270 562 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 CAVIN2O95810 425 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 DNAJC14Q6Y2X3 702 aaPredicted RBP13□□□□□ -0.33
PDE6B-201ENST00000255622 IRAK4Q9NWZ3 460 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 ANKRD18BA2A2Z9 1011 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 PPP1R12AO14974 1030 aaPredicted RBP13□□□□□ -0.33
PDE6B-201ENST00000255622 KIF23Q02241 960 aaPredicted RBP13□□□□□ -0.33
PDE6B-201ENST00000255622 MICU3Q86XE3 530 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 DDX24Q9GZR7 859 aaKnown RBP eCLIP13□□□□□ -0.33
PDE6B-201ENST00000255622 C4AP0C0L4 1744 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 C4BP0C0L5 1744 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 CAND2O75155 1236 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 WDHD1O75717 1129 aaPredicted RBP13□□□□□ -0.33
PDE6B-201ENST00000255622 CDC27P30260 824 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 CDC25BP30305 580 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 TPD52L1Q16890 204 aaPredicted RBP13□□□□□ -0.33
PDE6B-201ENST00000255622 CCDC102BQ68D86 513 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 CEP57L1Q8IYX8 460 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 TMTC2Q8N394 836 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 NEK11Q8NG66 645 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 MRFAP1L1Q96HT8 127 aa13□□□□□ -0.33
PDE6B-201ENST00000255622 ZNF335Q9H4Z2 1342 aaPredicted RBP12.99□□□□□ -0.33
PDE6B-201ENST00000255622 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
PDE6B-201ENST00000255622 MED4Q9NPJ6 270 aa12.99□□□□□ -0.33
PDE6B-201ENST00000255622 POLR3EQ9NVU0 708 aa12.99□□□□□ -0.33
PDE6B-201ENST00000255622 BTG4Q9NY30 223 aa12.99□□□□□ -0.33
PDE6B-201ENST00000255622 DDX41Q9UJV9 622 aaKnown RBP12.99□□□□□ -0.33
PDE6B-201ENST00000255622 UBN2Q6ZU65 1347 aa12.99□□□□□ -0.33
PDE6B-201ENST00000255622 MAFGO15525 162 aa12.99□□□□□ -0.33
PDE6B-201ENST00000255622 MAP2K2P36507 400 aa12.99□□□□□ -0.33
PDE6B-201ENST00000255622 STK11IPQ8N1F8 1099 aa12.99□□□□□ -0.33
PDE6B-201ENST00000255622 LCMT1Q9UIC8 334 aa12.99□□□□□ -0.33
PDE6B-201ENST00000255622 ANGEL1Q9UNK9 670 aaKnown RBP12.99□□□□□ -0.33
PDE6B-201ENST00000255622 PDE8BO95263 885 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 CYP19A1P11511 503 aaPredicted RBP12.98□□□□□ -0.33
PDE6B-201ENST00000255622 PDE6AP16499 860 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 METAP2P50579 478 aaKnown RBP eCLIP12.98□□□□□ -0.33
PDE6B-201ENST00000255622 TRDNQ13061 729 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 NAA30Q147X3 362 aaPredicted RBP12.98□□□□□ -0.33
PDE6B-201ENST00000255622 ZKSCAN8Q15776 578 aaPredicted RBP12.98□□□□□ -0.33
PDE6B-201ENST00000255622 ANO1Q5XXA6 986 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 SYNE3Q6ZMZ3 975 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 KCNG4Q8TDN1 519 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 A0A1W2PQ27 194 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 A0A1W2PQ64 194 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 A0A1W2PQD8 194 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 ZNF202O95125 648 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 PFKFB1P16118 471 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 ALG1Q9BT22 464 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 ITGB4P16144 1822 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 CCDC69A6NI79 296 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 SH2B2O14492 632 aaPredicted RBP12.98□□□□□ -0.33
PDE6B-201ENST00000255622 SKILP12757 684 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 CTDSPL2Q05D32 466 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 KRBA2Q6ZNG9 492 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 ANKRD20A12PQ8NF67 263 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 TRMT1Q9NXH9 659 aaKnown RBP12.98□□□□□ -0.33
PDE6B-201ENST00000255622 TACC3Q9Y6A5 838 aa12.98□□□□□ -0.33
PDE6B-201ENST00000255622 ZMYM6O95789 1325 aa12.97□□□□□ -0.33
PDE6B-201ENST00000255622 YEATS4O95619 227 aa12.97□□□□□ -0.33
PDE6B-201ENST00000255622 TTC31Q49AM3 519 aaPredicted RBP12.97□□□□□ -0.33
PDE6B-201ENST00000255622 APOA5Q6Q788 366 aa12.97□□□□□ -0.33
PDE6B-201ENST00000255622 VPS37DQ86XT2 251 aa12.97□□□□□ -0.33
PDE6B-201ENST00000255622 ANKRD7Q92527 254 aa12.97□□□□□ -0.33
PDE6B-201ENST00000255622 TEX13AQ9BXU3 409 aaPredicted RBP12.97□□□□□ -0.33
PDE6B-201ENST00000255622 TCRBV5S4A2TA0A5A2 114 aa12.97□□□□□ -0.33
PDE6B-201ENST00000255622 BRAPQ7Z569 592 aa12.97□□□□□ -0.33
PDE6B-201ENST00000255622 RANBP6O60518 1105 aaKnown RBP12.96□□□□□ -0.33
PDE6B-201ENST00000255622 CCZ1BP86790 482 aa12.96□□□□□ -0.33
PDE6B-201ENST00000255622 CCZ1P86791 482 aaPredicted RBP12.96□□□□□ -0.33
PDE6B-201ENST00000255622 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.33
PDE6B-201ENST00000255622 EPB41L4AQ9HCS5 686 aaPredicted RBP12.96□□□□□ -0.33
PDE6B-201ENST00000255622 ABCC12Q96J65 1359 aa12.96□□□□□ -0.33
PDE6B-201ENST00000255622 SLIT2O94813 1529 aa12.96□□□□□ -0.33
PDE6B-201ENST00000255622 A0A0G2JS52 829 aa12.96□□□□□ -0.33
PDE6B-201ENST00000255622 SLC3A2P08195 630 aaKnown RBP12.96□□□□□ -0.33
PDE6B-201ENST00000255622 KRT40Q6A162 431 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms