RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 WLSQ5T9L3 541 aa13.58□□□□□ -0.24
CCNA1-201ENST00000255465 RIC3Q7Z5B4 369 aa13.58□□□□□ -0.24
CCNA1-201ENST00000255465 KIAA1328Q86T90 577 aa13.58□□□□□ -0.24
CCNA1-201ENST00000255465 CCDC24Q8N4L8 307 aa13.58□□□□□ -0.24
CCNA1-201ENST00000255465 CNBD1Q8NA66 436 aa13.58□□□□□ -0.24
CCNA1-201ENST00000255465 DRAXINQ8NBI3 349 aaPredicted RBP13.58□□□□□ -0.24
CCNA1-201ENST00000255465 HNRNPLLQ8WVV9 542 aaKnown RBP13.58□□□□□ -0.24
CCNA1-201ENST00000255465 TSPAN18Q96SJ8 248 aa13.58□□□□□ -0.24
CCNA1-201ENST00000255465 BAG1Q99933 345 aaPredicted RBP13.58□□□□□ -0.24
CCNA1-201ENST00000255465 DLEC1Q9Y238 1755 aa13.58□□□□□ -0.24
CCNA1-201ENST00000255465 PXDNLA1KZ92 1463 aa13.58□□□□□ -0.24
CCNA1-201ENST00000255465 NPHP1O15259 732 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 TADA3O75528 432 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 PAX7P23759 505 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 RPS6KA3P51812 740 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 SLC8A3P57103 927 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 SNW1Q13573 536 aaKnown RBP13.57□□□□□ -0.24
CCNA1-201ENST00000255465 TTC19Q6DKK2 380 aaPredicted RBP13.57□□□□□ -0.24
CCNA1-201ENST00000255465 TPTE2Q6XPS3 522 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 FUT8Q9BYC5 575 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 A0A0G2JLW4 131 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 CCDC151A5D8V7 595 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 GADD45BO75293 160 aaPredicted RBP13.57□□□□□ -0.24
CCNA1-201ENST00000255465 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
CCNA1-201ENST00000255465 SCRN1Q12765 414 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 LRRFIP1Q32MZ4 808 aaKnown RBP13.57□□□□□ -0.24
CCNA1-201ENST00000255465 SUSD4Q5VX71 490 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 ZBTB40Q9NUA8 1239 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 DNAI1Q9UI46 699 aa13.57□□□□□ -0.24
CCNA1-201ENST00000255465 POTEB2H3BUK9 544 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 FLIIQ13045 1269 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 PARP10Q53GL7 1025 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 KCNV1Q6PIU1 500 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 LRRC31Q6UY01 552 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 AMOTL1Q8IY63 956 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 MAGEC3Q8TD91 643 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 IL17RAQ96F46 866 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 NYXQ9GZU5 481 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 BATF3Q9NR55 127 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 IRAK4Q9NWZ3 460 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 CHCHD3Q9NX63 227 aaKnown RBP13.56□□□□□ -0.24
CCNA1-201ENST00000255465 CACNA1SQ13698 1873 aa13.56□□□□□ -0.24
CCNA1-201ENST00000255465 COL11A2P13942 1736 aaPredicted RBP13.56□□□□□ -0.24
CCNA1-201ENST00000255465 PI4KAP2A4QPH2 592 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 SASH3O75995 380 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 DPEP1P16444 411 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 RCSD1Q6JBY9 416 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 KSR2Q6VAB6 950 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 PPP1R42Q7Z4L9 355 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 NLRP10Q86W26 655 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 SPATS2Q86XZ4 545 aaKnown RBP13.55□□□□□ -0.24
CCNA1-201ENST00000255465 PI4KAP1Q8N8J0 262 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 FAM71BQ8TC56 605 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 N4BP2L2Q92802 583 aaPredicted RBP13.55□□□□□ -0.24
CCNA1-201ENST00000255465 BRIP1Q9BX63 1249 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 TRIM5Q9C035 493 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 SMC3Q9UQE7 1217 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 ATP5J2-PTCD1G3V325 749 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 SKILP12757 684 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 PECAM1P16284 738 aaPredicted RBP13.55□□□□□ -0.24
CCNA1-201ENST00000255465 KCNA3P22001 575 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 CHRNA5P30532 468 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 PDIA5Q14554 519 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 RPUSD2Q8IZ73 545 aaKnown RBP13.55□□□□□ -0.24
CCNA1-201ENST00000255465 RABGGTAQ92696 567 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 ISCA1Q9BUE6 129 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 ZCCHC17Q9NP64 241 aaKnown RBP13.55□□□□□ -0.24
CCNA1-201ENST00000255465 MAP3K2Q9Y2U5 619 aa13.55□□□□□ -0.24
CCNA1-201ENST00000255465 ADCY9O60503 1353 aa13.54□□□□□ -0.24
CCNA1-201ENST00000255465 ARFGEF1Q9Y6D6 1849 aa13.54□□□□□ -0.24
CCNA1-201ENST00000255465 NTSR2O95665 410 aa13.54□□□□□ -0.24
CCNA1-201ENST00000255465 TUBBP07437 444 aa13.54□□□□□ -0.24
CCNA1-201ENST00000255465 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
CCNA1-201ENST00000255465 CCDC50Q8IVM0 306 aa13.54□□□□□ -0.24
CCNA1-201ENST00000255465 METTL22Q9BUU2 404 aaPredicted RBP13.54□□□□□ -0.24
CCNA1-201ENST00000255465 IMPACTQ9P2X3 320 aa13.54□□□□□ -0.24
CCNA1-201ENST00000255465 ODF2LQ9ULJ1 636 aa13.54□□□□□ -0.24
CCNA1-201ENST00000255465 TNRC6CQ9HCJ0 1690 aaKnown RBP13.54□□□□□ -0.24
CCNA1-201ENST00000255465 LAMB2P55268 1798 aa13.54□□□□□ -0.24
CCNA1-201ENST00000255465 GOLGB1Q14789 3259 aaKnown RBP13.53□□□□□ -0.24
CCNA1-201ENST00000255465 CAND2O75155 1236 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 IMPDH2P12268 514 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 PDE6BP35913 854 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 ERFEQ4G0M1 354 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 RINLQ6ZS11 566 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 MRPL50Q8N5N7 158 aaKnown RBP13.53□□□□□ -0.24
CCNA1-201ENST00000255465 SSH1Q8WYL5 1049 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 KAT2BQ92831 832 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 MYD88Q99836 296 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 LNPKQ9C0E8 428 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 WWC3Q9ULE0 1092 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 TRIM28Q13263 835 aaKnown RBP13.53□□□□□ -0.24
CCNA1-201ENST00000255465 MAP3K11Q16584 847 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 FILIP1LQ4L180 1135 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 HDXQ7Z353 690 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 C2CD5Q86YS7 1000 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 CEP112Q8N8E3 955 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 ABCC12Q96J65 1359 aa13.53□□□□□ -0.24
CCNA1-201ENST00000255465 DDX60Q8IY21 1712 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms