RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 CTR9Q6PD62 1173 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 HHIPL2Q6UWX4 724 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 LARGE2Q8N3Y3 721 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 MRIQ9BWK5 157 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 CNNM2Q9H8M5 875 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 CWC22Q9HCG8 908 aaKnown RBP11.19□□□□□ -0.62
NIP7-202ENST00000254941 TPCN1Q9ULQ1 816 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 DAGLAQ9Y4D2 1042 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 USP17L12C9JPN9 530 aa11.18□□□□□ -0.62
NIP7-202ENST00000254941 USP17L21D6R901 530 aa11.18□□□□□ -0.62
NIP7-202ENST00000254941 F8W031 263 aaPredicted RBP11.18□□□□□ -0.62
NIP7-202ENST00000254941 RHBDL3P58872 404 aa11.18□□□□□ -0.62
NIP7-202ENST00000254941 HDLBPQ00341 1268 aaKnown RBP11.18□□□□□ -0.62
NIP7-202ENST00000254941 ME3Q16798 604 aa11.18□□□□□ -0.62
NIP7-202ENST00000254941 SBK1Q52WX2 424 aa11.18□□□□□ -0.62
NIP7-202ENST00000254941 MFSD6Q6ZSS7 791 aa11.18□□□□□ -0.62
NIP7-202ENST00000254941 TAOK3Q9H2K8 898 aa11.18□□□□□ -0.62
NIP7-202ENST00000254941 RNF41Q9H4P4 317 aaPredicted RBP11.18□□□□□ -0.62
NIP7-202ENST00000254941 FOXD4L1Q9NU39 408 aa11.18□□□□□ -0.62
NIP7-202ENST00000254941 CHMP5Q9NZZ3 219 aa11.18□□□□□ -0.62
NIP7-202ENST00000254941 ARPP21Q9UBL0 812 aaPredicted RBP11.18□□□□□ -0.62
NIP7-202ENST00000254941 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
NIP7-202ENST00000254941 NEDD4P46934 1319 aa11.18□□□□□ -0.62
NIP7-202ENST00000254941 MINDY4BA8MYZ0 360 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 LARGE1O95461 756 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 PCP11498 1178 aaKnown RBP11.17□□□□□ -0.62
NIP7-202ENST00000254941 IARSP41252 1262 aaKnown RBP11.17□□□□□ -0.62
NIP7-202ENST00000254941 USP5P45974 858 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 ANTXR2P58335 489 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 FGD1P98174 961 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 NLGN2Q8NFZ4 835 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 TEKT1Q969V4 418 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 LRRC2Q9BYS8 371 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 KRT23Q9C075 422 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 BCS1LQ9Y276 419 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 TACC3Q9Y6A5 838 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 B4E1Z4 1266 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 NFKBIEO00221 500 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 PRC1O43663 620 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 FGRP09769 529 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 EVCP57679 992 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 CHST3Q7LGC8 479 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 KIAA0825Q8IV33 1275 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 TGFBRAP1Q8WUH2 860 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 BRF1Q92994 677 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 INCENPQ9NQS7 918 aa11.17□□□□□ -0.62
NIP7-202ENST00000254941 MYO3BQ8WXR4 1341 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 LTBP3Q9NS15 1303 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 MYH8P13535 1937 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 DICER1Q9UPY3 1922 aaKnown RBP11.16□□□□□ -0.62
NIP7-202ENST00000254941 CYP2D7A0A087X1C5 515 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 VIL1P09327 827 aaKnown RBP11.16□□□□□ -0.62
NIP7-202ENST00000254941 SCNN1DP51172 638 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 CYB5R4Q7L1T6 521 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 NIM1KQ8IY84 436 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 TEX11Q8IYF3 940 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 ZDHHC15Q96MV8 337 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 MCM9Q9NXL9 1143 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 ZSWIM5Q9P217 1185 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 ZNRF3Q9ULT6 936 aa11.16□□□□□ -0.62
NIP7-202ENST00000254941 SMIM22K7EJ46 135 aa11.15□□□□□ -0.62
NIP7-202ENST00000254941 USP17L8P0C7I0 530 aa11.15□□□□□ -0.62
NIP7-202ENST00000254941 CRKP46108 304 aa11.15□□□□□ -0.62
NIP7-202ENST00000254941 C12orf60Q5U649 245 aa11.15□□□□□ -0.62
NIP7-202ENST00000254941 APOBEC3HQ6NTF7 200 aaKnown RBP11.15□□□□□ -0.62
NIP7-202ENST00000254941 TMEM87BQ96K49 555 aa11.15□□□□□ -0.62
NIP7-202ENST00000254941 SERPINA10Q9UK55 444 aa11.15□□□□□ -0.62
NIP7-202ENST00000254941 ZBTB12Q9Y330 459 aaPredicted RBP11.15□□□□□ -0.62
NIP7-202ENST00000254941 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.15□□□□□ -0.62
NIP7-202ENST00000254941 FLT1P17948 1338 aa11.15□□□□□ -0.62
NIP7-202ENST00000254941 SBF1O95248 1867 aa11.15□□□□□ -0.62
NIP7-202ENST00000254941 PSMD14O00487 310 aa11.15□□□□□ -0.63
NIP7-202ENST00000254941 KDM4AO75164 1064 aa11.15□□□□□ -0.63
NIP7-202ENST00000254941 SLC3A2P08195 630 aaKnown RBP11.15□□□□□ -0.63
NIP7-202ENST00000254941 ST3GAL1Q11201 340 aa11.15□□□□□ -0.63
NIP7-202ENST00000254941 RSBN1LQ6PCB5 846 aaPredicted RBP11.15□□□□□ -0.63
NIP7-202ENST00000254941 CCDC83Q8IWF9 413 aa11.15□□□□□ -0.63
NIP7-202ENST00000254941 AMOTL1Q8IY63 956 aa11.15□□□□□ -0.63
NIP7-202ENST00000254941 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.63
NIP7-202ENST00000254941 ZNF274Q96GC6 653 aaPredicted RBP11.15□□□□□ -0.63
NIP7-202ENST00000254941 GMLQ99445 158 aa11.15□□□□□ -0.63
NIP7-202ENST00000254941 MTA3Q9BTC8 594 aa11.15□□□□□ -0.63
NIP7-202ENST00000254941 ANGEL1Q9UNK9 670 aaKnown RBP11.15□□□□□ -0.63
NIP7-202ENST00000254941 ROBO3Q96MS0 1386 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 ORC4O43929 436 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 RAD17O75943 681 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 EVX2Q03828 476 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 APOBRQ0VD83 1088 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 CDC42EP5Q6NZY7 148 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 MAPKAPK5Q8IW41 473 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 NECAB1Q8N987 351 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 IGDCC4Q8TDY8 1250 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 JDP2Q8WYK2 163 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 ESR2Q92731 530 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 GTF3C6Q969F1 213 aa11.14□□□□□ -0.63
NIP7-202ENST00000254941 FHDC1Q9C0D6 1143 aaPredicted RBP11.14□□□□□ -0.63
NIP7-202ENST00000254941 GPHNQ9NQX3 736 aaPredicted RBP11.14□□□□□ -0.63
NIP7-202ENST00000254941 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms