RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 TAOK2Q9UL54 1235 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 TERF1P54274 439 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 CCDC158Q5M9N0 1113 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 SGMS1Q86VZ5 419 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 APOA5Q6Q788 366 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 TNFRSF25Q93038 417 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 PTGS1P23219 599 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 UBE3CQ15386 1083 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 DPCR1Q3MIW9 517 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 PHKBQ93100 1093 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 CFAP45Q9UL16 551 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 PRC1O43663 620 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 MCM5P33992 734 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 FOSBP53539 338 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 CTDSPL2Q05D32 466 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 PDE4BQ07343 736 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 ALX1Q15699 326 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 KIF6Q6ZMV9 814 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 TMEM139Q8IV31 216 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.69□□□□□ -0.73e-6■■□□□ 12.2
RPA1-201ENST00000254719 CGNQ9P2M7 1197 aaKnown RBP10.69□□□□□ -0.7
RPA1-201ENST00000254719 FAM205CA6NFA0 338 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 HMGB1P09429 215 aaKnown RBP10.69□□□□□ -0.7
RPA1-201ENST00000254719 FAM200AQ8TCP9 573 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 SPATA32Q96LK8 384 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 ERICH2A1L162 156 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 EDIL3O43854 480 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 CEBPZQ03701 1054 aaKnown RBP10.69□□□□□ -0.7
RPA1-201ENST00000254719 NOLC1Q14978 699 aaKnown RBP eCLIP10.69□□□□□ -0.7
RPA1-201ENST00000254719 BPTFQ12830 3046 aa10.69□□□□□ -0.7
RPA1-201ENST00000254719 RBBP6Q7Z6E9 1792 aaKnown RBP10.69□□□□□ -0.7
RPA1-201ENST00000254719 PDE8AO60658 829 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 TPM1P09493 284 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 GTF2E1P29083 439 aaPredicted RBP10.68□□□□□ -0.7
RPA1-201ENST00000254719 ZNF75DP51815 510 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 SLC9C2Q5TAH2 1124 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 SARM1Q6SZW1 724 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 USP49Q70CQ1 688 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 LRRN4CLQ8ND94 238 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 TOMM22Q9NS69 142 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 A0A1B0GVL5 298 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 LDHAL6AQ6ZMR3 332 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 DZIP3Q86Y13 1208 aaKnown RBP10.68□□□□□ -0.7
RPA1-201ENST00000254719 CMTR1Q8N1G2 835 aaKnown RBP10.68□□□□□ -0.7
RPA1-201ENST00000254719 JMYQ8N9B5 988 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 CTIFO43310 598 aaKnown RBP10.68□□□□□ -0.7
RPA1-201ENST00000254719 KINO60870 393 aaKnown RBP10.68□□□□□ -0.7
RPA1-201ENST00000254719 IL17AQ16552 155 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 METTL16Q86W50 562 aaKnown RBP10.68□□□□□ -0.7
RPA1-201ENST00000254719 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
RPA1-201ENST00000254719 B4E1Z4 1266 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 IFIT5Q13325 482 aaKnown RBP10.67□□□□□ -0.7
RPA1-201ENST00000254719 CCDC57Q2TAC2 916 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 DPF2Q92785 391 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 ACSBG1Q96GR2 724 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 MTRQ99707 1265 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 SCAND2PQ9GZW5 306 aaPredicted RBP10.67□□□□□ -0.7
RPA1-201ENST00000254719 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 SIK1P57059 783 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 SART3Q15020 963 aaKnown RBP10.67□□□□□ -0.7
RPA1-201ENST00000254719 SPATA5Q8NB90 893 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 OXER1Q8TDS5 423 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 CYP2D7A0A087X1C5 515 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 ZSCAN20P17040 1043 aaPredicted RBP10.67□□□□□ -0.7
RPA1-201ENST00000254719 XBP1P17861 261 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 WASHC4Q2M389 1173 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 CERS3Q8IU89 383 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 AMOTL1Q8IY63 956 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 IFNL3Q8IZI9 196 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 MYH8P13535 1937 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 PTPN21Q16825 1174 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 MYSM1Q5VVJ2 828 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 SPATA20Q8TB22 786 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 CEP126Q9P2H0 1117 aa10.67□□□□□ -0.7
RPA1-201ENST00000254719 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.67□□□□□ -0.7
RPA1-201ENST00000254719 V9GYY5 206 aaPredicted RBP10.67□□□□□ -0.7
RPA1-201ENST00000254719 PNPLA7Q6ZV29 1317 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 APPP05067 770 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 NYAP1Q6ZVC0 841 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 CELF1Q92879 486 aaKnown RBP10.66□□□□□ -0.7
RPA1-201ENST00000254719 CLIC6Q96NY7 704 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 ZSCAN16Q9H4T2 348 aaPredicted RBP10.66□□□□□ -0.7
RPA1-201ENST00000254719 TUBE1Q9UJT0 475 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 ERFEQ4G0M1 354 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 ADALQ6DHV7 355 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 ARMCX5Q6P1M9 558 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 AKAP2Q9Y2D5 859 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 SCN9AQ15858 1988 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 KLF18A0A0U1RQI7 1052 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 CCP110O43303 1012 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 PDE4CQ08493 712 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 ANKRD20A12PQ8NF67 263 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 TMX4Q9H1E5 349 aaPredicted RBP10.66□□□□□ -0.7
RPA1-201ENST00000254719 NUP62CLQ9H1M0 184 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 ARMT1Q9H993 441 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 SMCHD1A6NHR9 2005 aa10.66□□□□□ -0.7
RPA1-201ENST00000254719 CAVIN2O95810 425 aa10.65□□□□□ -0.7
RPA1-201ENST00000254719 POLR3DP05423 398 aaPredicted RBP10.65□□□□□ -0.7
RPA1-201ENST00000254719 MAP3K11Q16584 847 aa10.65□□□□□ -0.7
RPA1-201ENST00000254719 TBC1D9BQ66K14 1250 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms