RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 TNFAIP1Q13829 316 aa17.03■□□□□ 0.32
UBE4B-201ENST00000253251 DLGAP5Q15398 846 aa17.03■□□□□ 0.32
UBE4B-201ENST00000253251 ADGRB1O14514 1584 aa17.03■□□□□ 0.32
UBE4B-201ENST00000253251 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
UBE4B-201ENST00000253251 DIS3L2Q8IYB7 885 aaKnown RBP17.03■□□□□ 0.32
UBE4B-201ENST00000253251 PICK1Q9NRD5 415 aa17.03■□□□□ 0.32
UBE4B-201ENST00000253251 V9GY48 417 aaPredicted RBP17.03■□□□□ 0.32
UBE4B-201ENST00000253251 PPIP5K2O43314 1243 aa17.02■□□□□ 0.32
UBE4B-201ENST00000253251 TCERG1LQ5VWI1 586 aa17.02■□□□□ 0.32
UBE4B-201ENST00000253251 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.32
UBE4B-201ENST00000253251 GYG1P46976 350 aa17.02■□□□□ 0.32
UBE4B-201ENST00000253251 TDRD12Q587J7 1177 aaKnown RBP17.02■□□□□ 0.32
UBE4B-201ENST00000253251 CC2D2BQ6DHV5 1058 aa17.02■□□□□ 0.32
UBE4B-201ENST00000253251 CDHR2Q9BYE9 1310 aa17.02■□□□□ 0.32
UBE4B-201ENST00000253251 GOLGA6L10A6NI86 522 aa17.02■□□□□ 0.32
UBE4B-201ENST00000253251 MCM7P33993 719 aa17.02■□□□□ 0.32
UBE4B-201ENST00000253251 BCAMP50895 628 aa17.02■□□□□ 0.32
UBE4B-201ENST00000253251 CTDSPL2Q05D32 466 aa17.02■□□□□ 0.32
UBE4B-201ENST00000253251 SEPT12Q8IYM1 358 aa17.02■□□□□ 0.32
UBE4B-201ENST00000253251 PFKFB2O60825 505 aa17.02■□□□□ 0.31
UBE4B-201ENST00000253251 SERPINB2P05120 415 aa17.02■□□□□ 0.31
UBE4B-201ENST00000253251 CCDC174Q6PII3 467 aa17.02■□□□□ 0.31
UBE4B-201ENST00000253251 PNMA2Q9UL42 364 aa17.02■□□□□ 0.31
UBE4B-201ENST00000253251 GTF2IP78347 998 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 ZNF771Q7L3S4 317 aaPredicted RBP17.01■□□□□ 0.31
UBE4B-201ENST00000253251 LSG1Q9H089 658 aaKnown RBP17.01■□□□□ 0.31
UBE4B-201ENST00000253251 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 RGS12O14924 1447 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 JCADQ9P266 1359 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 TFAP4Q01664 338 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 EDC3Q96F86 508 aaKnown RBP17.01■□□□□ 0.31
UBE4B-201ENST00000253251 TTF2Q9UNY4 1162 aaKnown RBP17.01■□□□□ 0.31
UBE4B-201ENST00000253251 MYO3AQ8NEV4 1616 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 CASQ1P31415 396 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 MAPKAPK5Q8IW41 473 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 TGFBRAP1Q8WUH2 860 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 ALS2CR12Q96Q35 445 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 RPAP1Q9BWH6 1393 aaPredicted RBP17.01■□□□□ 0.31
UBE4B-201ENST00000253251 MED23Q9ULK4 1368 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 CCDC24Q8N4L8 307 aa17.01■□□□□ 0.31
UBE4B-201ENST00000253251 KRT13P13646 458 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 PHKA1P46020 1223 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 PTH1RQ03431 593 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 HS1BP3Q53T59 392 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 FERMT2Q96AC1 680 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 CLEC11AQ9Y240 323 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 USP17L12C9JPN9 530 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 USP17L21D6R901 530 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 PRDM1O75626 825 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 BRD1O95696 1058 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 KIF4BQ2VIQ3 1234 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 PUS3Q9BZE2 481 aaKnown RBP17■□□□□ 0.31
UBE4B-201ENST00000253251 USP40Q9NVE5 1235 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 TMOD4Q9NZQ9 345 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 SLC1A4P43007 532 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 TNNT3P45378 269 aaPredicted RBP17■□□□□ 0.31
UBE4B-201ENST00000253251 NONOQ15233 471 aaKnown RBP eCLIP17■□□□□ 0.319e-6■□□□□ 10.9
UBE4B-201ENST00000253251 IFI16Q16666 785 aaKnown RBP17■□□□□ 0.31
UBE4B-201ENST00000253251 KRT40Q6A162 431 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 ZNF654Q8IZM8 581 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 DCCP43146 1447 aa17■□□□□ 0.31
UBE4B-201ENST00000253251 SETQ01105 290 aaPredicted RBP17■□□□□ 0.31
UBE4B-201ENST00000253251 PAFAH1B1P43034 410 aa16.99■□□□□ 0.31
UBE4B-201ENST00000253251 HAUS3Q68CZ6 603 aa16.99■□□□□ 0.31
UBE4B-201ENST00000253251 DNAJC25Q9H1X3 360 aa16.99■□□□□ 0.31
UBE4B-201ENST00000253251 NCOA5Q9HCD5 579 aaKnown RBP16.99■□□□□ 0.31
UBE4B-201ENST00000253251 DKC1O60832 514 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■■■■ 36.2
UBE4B-201ENST00000253251 DDAH1O94760 285 aa16.99■□□□□ 0.31
UBE4B-201ENST00000253251 FGAP02671 866 aa16.99■□□□□ 0.31
UBE4B-201ENST00000253251 TRIM28Q13263 835 aaKnown RBP16.99■□□□□ 0.31
UBE4B-201ENST00000253251 GPCPD1Q9NPB8 672 aa16.99■□□□□ 0.31
UBE4B-201ENST00000253251 GALNT17Q6IS24 598 aa16.99■□□□□ 0.31
UBE4B-201ENST00000253251 FMNL3Q8IVF7 1028 aa16.99■□□□□ 0.31
UBE4B-201ENST00000253251 SIRT2Q8IXJ6 389 aa16.99■□□□□ 0.31
UBE4B-201ENST00000253251 AOPEPQ8N6M6 819 aa16.99■□□□□ 0.31
UBE4B-201ENST00000253251 ZSCAN10Q96SZ4 725 aaPredicted RBP16.99■□□□□ 0.31
UBE4B-201ENST00000253251 GJA3Q9Y6H8 435 aa16.99■□□□□ 0.31
UBE4B-201ENST00000253251 PPEF1O14829 653 aaPredicted RBP16.98■□□□□ 0.31
UBE4B-201ENST00000253251 CYLC1P35663 651 aaPredicted RBP16.98■□□□□ 0.31
UBE4B-201ENST00000253251 ADCY7P51828 1080 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 TTC38Q5R3I4 469 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 GOPCQ9HD26 462 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 HS2ST1Q7LGA3 356 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 CPLX3Q8WVH0 158 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 ADCY9O60503 1353 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.98■□□□□ 0.31
UBE4B-201ENST00000253251 ISM2Q6H9L7 571 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 SV2BQ7L1I2 683 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 TTLL11Q8NHH1 800 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 PLEKHG2Q9H7P9 1386 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 TRIM37O94972 964 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 CCDC65Q8IXS2 484 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 BSDC1Q9NW68 430 aaPredicted RBP16.98■□□□□ 0.31
UBE4B-201ENST00000253251 NARFQ9UHQ1 456 aa16.98■□□□□ 0.31
UBE4B-201ENST00000253251 UQCRHLA0A096LP55 91 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 UQCRHP07919 91 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 LETM2Q2VYF4 491 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 ERFEQ4G0M1 354 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 POTEB2H3BUK9 544 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms